| Gene_Abbrev | ScriptSure_ID | mRNA_ID | LocLink_ID | Class | Set | Description | Probe Sequence |
| AA125825 | | AA125825 | | Other | Seed | | GCTTACCAATATTCTGAGAGGTAACAAATGGGATATGGGTTGAGACTGCA |
| AA634818 | | AA634818 | | Other | Seed | | GGGCTGGCTCATCATCACAGCTTCTCTGCTCAGTGAGGAGACCATCATTG |
| AATF | | NM_012138 | 26574 | bZIP | Seed | apoptosis antagonizing transcription factor | TCCTTAGCAAGCTACTGAGTTTCATGGCACCTATTGACCATACTACAATG |
| AB002296 | NT_033233:4 | AB002296 | | Bromodomain | Found | | TGACCTTAGCTTAACAGTTCTGAGACCACTAATGACAACCATGTCTGAGTT |
| AB058701 | NT_025741:494 | AB058701 | | ZnF-Other | Found | | TGGCCATTTCAAGAGAGCGAGACATCTGGGCCCTCACAGTGCTGCCAACT |
| AB075831 | NT_011139:311 | AB075831 | | ZnF-C2H2 | Found | | CAGCAGCACCGGCGGTTGCACTTGCGGCCAGTCGCCTTTGCCCGCGCCCCC |
| ABT1 | | NM_013375 | 29777 | Other | Seed | activator of basal transcription 1 | AAGCGTGAGACCGACTTCTATCTTCAAAGTGTGGAACGGGGACAACGCTT |
| ADNP | | NM_015339 | 23394 | Homeobox | Seed | activity-dependent neuroprotector | AATGCATCTGAGAATGATGAGCGCTTATCTAACCCCCAGATTGAGTGGCA |
| AEBP2 | NT_035211:21 | NM_153207 | 121536 | ZnF-C2H2 | Found | AE(adipocyte enhancer)-binding protein 2 | CTTCTCAGGGAGGGCTAGCTCGTCATGTACCCACACACTTCAGTCAGCAG |
| AF020591 | | NM_014480 | 27300 | ZnF-C2H2 | Seed | zinc finger protein | GCAATCAGTGCAATAAAGCCTTTGCAAGGAGCTCCTACCTTGTGATGCAT |
| AF093680 | | NM_013242 | 29105 | Other | Seed | similar to mouse Glt3 or D. melanogaster transcription factor IIB | TCAGAGTGCAGATCCATGCAAATTGTCGCATCCGACGGGTTTACTTCTCA |
| AF5Q31 | | NM_014423 | 27125 | Structural | Seed | ALL1 fused gene from 5q31 | GCTGCAGATAAACGACTCACAGTACTTTGCCTGCGATGCGAGTCTTTGCT |
| AHR | | NM_001621 | 196 | bHLH | Seed | aryl hydrocarbon receptor | TGGACTACCCTATGGGGAGTTTTGAACCATCCCCATACCCCACTACTTCT |
| AHRR | NT_034766:39 | NM_020731 | 57491 | Co-repressor | Found | aryl hydrocarbon receptor repressor | CACCACCAGTCTGTGCGAATCGGAACTGCATGGAAAACCCAATTACTCAG |
| AI022870 | | AI022870 | | Other | Seed | catalytic subunit of DNA polymerase zeta | TGGCCAGGTCTCTAGGAGATAGCACAGAGACCAGAGCAAGGGACATCCCA |
| AI352508 | | AI352508 | | Other | Seed | Highly similar to DPOZ_HUMAN DNA POLYMERASE ZETA SUBUNIT | TTCTTCCAAGAATCCAACGTAGCTGAGTACCTTGTAACAAGTGCAGTCCA |
| AI569906 | | AI569906 | | ZnF-C2H2 | Seed | Weakly similar to ZN42_HUMAN ZINC FINGER PROTEIN 42 | CCTTTATGATGTTAGATGCTGGAATGAACAAGCCACTTGGCCCCCAAACC |
| AI808690 | | AI808690 | | Other | Seed | hypothetical protein | CCTATATGCCTAGTGCGGTTTCAGGTGCAGAAGCCGAGGCACTGCTCTTA |
| AIRE | | NM_000383 | 326 | ZnF-PHD | Seed | autoimmune regulator (automimmune polyendocrinopathy candidiasis ectodermal dystrophy) | TTCTACACTCCCAGCAAGTTCGAAGACTCCGGCAGTGGGAAGAACAAGGC |
| AK024238 | NT_023124:29 | AK024238 | | Homeobox | Found | | CTGGCAATCCTAAGCACCAGTTGCAGGGAACTGGTCAGCAAGACACATCT |
| AK056369 | NT_034877:1 | AK056369 | | ZnF-C2H2 | Found | | TGATGGAAATATCCATGCAATTTGTGGAGTGCCCTCTCAACATGGGACTGAG |
| AK057375 | NT_008389:5 | AK057375 | | ZnF-C2H2 | Found | | |
| AK074366 | NT_005825:35 | AK074366 | | ZnF-C2H2 | Found | | AGATCCCTGGGACACCGAGATTCTGAGAGGCATCAGTCAAGGTGGTGAGT |
| AK074859 | NT_011150:41 | AK074859 | | ZnF-C2H2 | Found | | AGCCGGGCACCTCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAG |
| AK092811 | NT_017568:327 | AK092811 | | ZnF-C2H2 | Found | | |
| AK096221 | NT_035560:44 | AK096221 | | ZnF-C2H2 | Found | | |
| AK096288 | NT_007819:700 | AK096288 | | ZnF-C2H2 | Found | | |
| AK098183 | NT_011104:165 | AK098183 | | ZnF-C2H2 | Found | | ACGGAACACACCCCAAGCGTACAGCCAAGCTTTACCTGCACCAAAAGGAG |
| AK122874 | NT_011568:219 | AK122874 | | ZnF-C2H2 | Found | | |
| AK126753 | NT_011176:418 | AK126753 | | ZnF-C2H2 | Found | | ATGGGGAACCTTTCCTTTCTCTTCCAGTCTTTGGAAGGCACAGGGTATGACACA |
| AK128361 | NT_011109:1283 | AK128361 | | ZnF-C2H2 | Found | | GCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAG |
| AKAP9 | NT_007933:1231 | NM_005751 | 10142 | Co-repressor | Found | A kinase (PRKA) anchor protein (yotiao) 9 | CCAGGCACTCCAGCTGATTTCAATCCTGGTTCTTTAGCATGTTCTCAGCTTCAGA |
| ALF | | NM_006872 | 11036 | Other | Seed | TFIIA-alpha/beta-like factor | CTGTTTGACACGGATAATGTAATTGTCTGTCAGTATGATAAGATTCATCG |
| ALX3 | | NM_006492 | 257 | Homeobox | Seed | aristaless-like homeobox 3 | CACAGCTTTGAGCCTTCCTCAGATGGTGACTATAAGTCTCCAAGCCTCGT |
| ALX4 | | NM_021926 | 60529 | Homeobox | Seed | aristaless-like homeobox 4 | TTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTG |
| ALY | | AF047022 | 10189 | Co-activator | Seed | THO complex 4 | GGTCGTACAAACTGCATCAGGAGATATGCCAACATATCAGATCCGAACTA |
| AMOT | NT_011783:8 | NM_133265 | 154796 | bZIP | Found | angiomotin | ACTGCCCGTTCTACCAATGAGGACCAAAGACGACACATCGAAATCCGAGA |
| ANP32A | | NM_006305 | 8125 | Co-activator | Seed | acidic (leucine-rich) nuclear phosphoprotein 32 family, member A | AATTCTTAAGTACAATCAACGTAGGCCTCACCTCAATCGCAAACTTACCA |
| APA1 | | NM_021188 | 57862 | ZnF-C2H2 | Seed | likely ortholog of mouse another partner for ARF 1 | TGGAGAGTCCTTGAACCTACCAAATACCAATTCTATCCTGGGAGTTGATG |
| Apg4B | | NM_013325 | 23192 | Other | Seed | Apg4/Aut2 homolog 2 (yeast) | CCAGGCGCCGGTTCTGTGGTTGGTTTGGAATTAAAGTCCTGTTTGAAGTT |
| AR | | NM_000044 | 367 | NHR | Seed | androgen receptor (dihydrotestosterone receptor) | AGCTGCATCAGTTCACTTTTGACCTGCTAATCAAGTCACACATGGTGAGC |
| ARC | | NM_015193 | 23237 | Other | Seed | activity-regulated cytoskeleton-associated protein | GCTCCGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGCAGTACAGC |
| ARID1A | NT_028053:228 | NM_006015 | 8289 | Structural | Found | AT rich interactive domain 1A (SWI- like) | CTCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCA |
| ARIH2 | | NM_006321 | 10425 | ZnF-Other | Seed | ariadne (Drosophila) homolog 2 | CCAGATGCATATAGCGGAGCAGCGGAGGAGAACCCTGCTGAAAGATTTCC |
| ARIX | | NM_005169 | 401 | Homeobox | Seed | aristaless homeobox | AAGGAGCTGGAGCGCGTTTTCGCTGAGACCCACTACCCCGACATTTACAC |
| ARNT | | NM_001668 | 405 | bHLH | Seed | aryl hydrocarbon receptor nuclear translocator | CATCATCGTTCAAGTTCTAGTGAGCAACATGTTCAACAACCGCCAGCACA |
| ARNT2 | | NM_014862 | 9915 | bHLH | Seed | aryl-hydrocarbon receptor nuclear translocator 2 | CTGTCGGTCATGTATCGATTTCGCACCAAGAACCGGGAGTGGATGTTGAT |
| ARNTL | | NM_001178 | 406 | bHLH | Seed | aryl hydrocarbon receptor nuclear translocator-like | CCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCA |
| ARNTL2 | NT_035213:171 | NM_020183 | 56938 | bHLH | Found | aryl hydrocarbon receptor nuclear translocator-like 2 | CCTGCCTTGTGGCCATTGGAAGATTACAGCCATATATTGTTCCACAGAACAGTGG |
| ARX | NT_025940:10 | NM_139058 | 170302 | Homeobox | Found | aristaless related homeobox | TCCAGAACCGTCGGGCCAAGTGGCGCAAGCGGGAGAAGGCAGGCGCGCAG |
| ASCL1 | | NM_004316 | 429 | bHLH | Seed | achaete-scute complex (Drosophila) homolog-like 1 | ACAAGAAGATGAGTAAGGTGGAGACACTGCGCTCGGCGGTCGAGTACATC |
| ASCL2 | | NM_005170 | 430 | bHLH | Seed | achaete-scute complex (Drosophila) homolog-like 2 | AGCAAGAAGCTGAGCAAGGTGGAGACGCTGCGCTCAGCCGTGGAGTACAT |
| ASCL3 | | NM_020646 | 56676 | bHLH | Seed | achaete-scute complex (Drosophila) homolog-like 3 | ATCTTCCCTGATTCTGCCCGCTTGCCACTGACCAGGTCCTTCTATCTGGA |
| ASH1 | | NM_018489 | 55870 | ZnF-PHD | Seed | hypothetical protein ASH1 | AGGAACTAATAAGTCGCCTAAGTGAAATTCGGATCACTCATCGAAGTCAT |
| ASH2L | | NM_004674 | 9070 | Structural | Seed | ash2 (absent, small, or homeotic, Drosophila, homolog)-like | GACCATGCTTCAAGTATCCTCCGAAGGATCTCACTTACCGCCCTATGAGT |
| ATBF1 | | NM_006885 | 463 | ZnF-C2H2 | Seed | AT-binding transcription factor 1 | AGACGAGGGCAACGCAGATAACGACAGTGCAACGGGAATAGCAACTGAAA |
| ATF1 | | NM_005171 | 466 | bZIP | Seed | activating transcription factor 1 | GTGACTCTCACCTCTCAGACAACTAAGACAGATGACCCCCAATTGAAAAG |
| ATF2 | | NM_001880 | 1386 | bZIP | Seed | activating transcription factor 2 | ATTTCAGTGCCGAGTAGTCCACATACGGAAGCTATACAGCATAGTTCGGT |
| ATF3 | | NM_001674 | 467 | bZIP | Seed | activating transcription factor 3 | GCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACGTGTATTGTCC |
| ATF4 | | NM_001675 | 468 | bZIP | Seed | activating transcription factor 4 (tax-responsive enhancer element B67) | AGATAGGAAGCCAGACTACACTGCTTACGTTGCCATGATCCCTCAGTGCA |
| ATF5 | | NM_012068 | 22809 | bZIP | Seed | activating transcription factor 5 | TGGCAGGTGATGGCTTCTCTGACTGGATGACTGAGCGAGTTGATTTCACA |
| ATF6 | | NM_007348 | 22926 | bZIP | Seed | activating transcription factor 6 | CTTGTCAGCCCCTAATTAATACAACAGAGTCTCTCAGGTTAAATCATGAA |
| ATF7 | | NM_006856 | 11016 | bZIP | Seed | activating transcription factor 7 | GCCAAGATGAGACTGAAAGCCACCCTAACTCACCAAGTCTCCTCAATCAA |
| ATF7IP | | NM_018179 | 55729 | Co-activator | Seed | activating transcription factor 7 interacting protein | GCTGTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGTTCGAGTGCCTCA |
| ATOH1 | | NM_005172 | 474 | bHLH | Seed | atonal homolog 1 | GTCCAAATATGAGACCCTGCAGATGGCCCAAATCTACATCAACGCCTTGT |
| ATOH7 | | NM_145178 | 220202 | bHLH | Seed | atonal homolog 7 (Drosophila) | CGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAGGAAAATTAGTCGATT |
| ATRX | | NM_000489 | 546 | ZnF-PHD | Seed | alpha thalassemia/mental retardation syndrome X-linked (RAD54 (S. cerevisiae) homolog) | CAAAATGCTCTTAAGGAAGAGGAAGAGAGACGAAAACGTATTGCTGAGAG |
| AW451453 | | AW451453 | | Other | Seed | | ATCCTTGGGATATATTGGCGGAAGTTGGAGGCGTCATGCATCGCCTCCTG |
| AW875035 | | AW875035 | | ZnF-C2H2 | Seed | Moderately similar to YY1, Very very hypothetical protein RMSA-1 | CTCTGTAATAGCTCCAGGCCAAGAGTTGTTGCCTCACGCCACCTATCAGA |
| AWP1 | | NM_019006 | 54469 | ZnF-AN1 | Seed | protein associated with PRK1 | GTGGTGTACACCGTTACTCAGATGTACACAATTGCTCTTACAATTACAAA |
| AY026053 | NT_011519:29 | AY026053 | | Heat Shock | Found | | GGGTCTCCATTGTGTGAACACATAATCCCTGGGGATTCAGACTTAAGGTCAATGA |
| BA044953 | NT_005825:31 | | | ZnF-C2H2 | Found | | |
| BACH1 | | NM_001186 | 571 | bZIP | Seed | BTB and CNC homology 1, basic leucine zipper transcription factor 1 | CATTCAATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAGTCC |
| BACH2 | | NM_021813 | 60468 | bZIP | Seed | BTB and CNC homology 1, basic leucine zipper transcription factor 2 | AAATGACTGATAAGTGTACAACTGACGAACAGCCCAGGAAAGATTATACC |
| BAGE2 | NT_029490:10 | NM_182482 | 85319 | ZnF-PHD | Found | B melanoma antigen family, member 2 | |
| BANP | | NM_017869 | 54971 | Co-activator | Seed | BANP homolog, SMAR1 homolog | TCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGC |
| BAPX1 | | NM_001189 | 579 | Homeobox | Seed | bagpipe homeobox (Drosophila) homolog 1 | GGCCCCAGAGGTGCACACGTGTCCGCGCTGTGCAGCGGGGCCGGCGGCGG |
| BARHL1 | | NM_020064 | 56751 | Homeobox | Seed | BarH (Drosophila)-like 1 | AGCTGGACAAAAGTGGCAGCAACGCCTCATCGGACTCTGAGTATAAAGTG |
| BARHL2 | | AJ251753 | 56750 | Homeobox | Seed | BarH (Drosophila)-like 2 | CAGGGAACTACTCGGCGCTGCAGAGGATGTTTCCATCGCCTTATTTCTAT |
| BARX1 | | NM_021570 | 56033 | Homeobox | Seed | BarH-like homeobox 1 | GAGAAACGCTTCGAGAAGCAGAAGTACCTTTCCACGCCGGACAGAATAGA |
| BARX2 | | NM_003658 | 8538 | Homeobox | Seed | BarH-like homeobox 2 | AAGCAGAAGTATTTGTCAACCCCAGACAGGTTGGACTTGGCTCAGTCTCT |
| BATF | | NM_006399 | 10538 | bZIP | Seed | basic leucine zipper transcription factor, ATF-like | GAGATCAAGCAGCTCACAGAGGAACTGAAGTACTTCACGTCGGTGCTGAA |
| BAZ1A | | NM_013448 | 11177 | Bromodomain | Seed | bromodomain adjacent to zinc finger domain, 1A | AATGTCGACCAAAGCAACGTTGTAGAAGACTGTCCTTTAGACAGAGACCA |
| BAZ1B | | NM_023005 | 9031 | Bromodomain | Seed | bromodomain adjacent to zinc finger domain, 1B | CAAACTAGTCATGCGCAGGACTCCTATTGGCACAGATCGAAACCATAATA |
| BAZ2A | | NM_013449 | 11176 | Bromodomain | Seed | bromodomain adjacent to zinc finger domain, 2A | TACAGAGATATCATATGAGATCACCCCTCGCATTCGTATCTGGCGCCAGA |
| BAZ2B | | NM_013450 | 29994 | Bromodomain | Seed | bromodomain adjacent to zinc finger domain, 2B | AACATTGAAAGAAGAATTGAGGAAGATATTGCTCCAGGGCTCAGGGTGTG |
| BC006361 | NT_004350:22 | BC006361 | | bHLH | Found | | |
| BC012905 | NT_011535:14 | BC012905 | | ZnF-C2H2 | Found | | ATTGATGGTGTTGCAGCCGCTCTTCACGAACACGGGCTATGGCGACCACG |
| BC015765 | NT_035560:36 | | | ZnF-C2H2 | Found | | |
| BC017109 | NT_011109:1373 | BC017109 | | ZnF-C2H2 | Found | | |
| BC033211 | NT_024812:36 | BC033211 | | Structural | Found | | ATCTACTGCGAGCAGGACCGCGCGCTGGTGTGCGGAGTGTGCGCCTCACT |
| BC046415 | NT_033317:123 | BC046415 | | ZnF-C2H2 | Found | | |
| BC046449 | NT_011109:1469 | BC046449 | | ZnF-C2H2 | Found | | |
| BC052269 | NT_011333:181 | BC052269 | | ZnF-C2H2 | Found | | GCGAGCTGCCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTCTCAGAG |
| BC052625 | NT_007914:856 | BC052625 | | ZnF-C2H2 | Found | | CTTCAGCTCCAAAACCAACCTAGTCCGCCACCAGGCGATCCACACAGGCT |
| BCL11A | | NM_018014 | 53335 | ZnF-C2H2 | Seed | B-cell CLL/lymphoma 11A (zinc finger protein) | ACACATGAAAAAATGGCACAGTGATCGAGTGTTGAATAATGATATAAAAA |
| BCL11B | | NM_022898 | 64919 | ZnF-C2H2 | Seed | B-cell CLL/lymphoma 11B (zinc finger protein) | AACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGACGTCAAA |
| BCL3 | | NM_005178 | 602 | Co-activator | Seed | B-cell CLL/lymphoma 3 | GAGGGGAGAGGTGGGCCGTAACGGGCACGGATCACGATGTAAATTATTAA |
| BCL6 | | NM_001706 | 604 | ZnF-C2H2 | Seed | B-cell CLL/lymphoma 6 (zinc finger protein 51; Drosophila kr¸ppel homolog) | GAAACCTTACCATTGTGAGAAGTGTAACCTGCATTTCCGTCACAAAAGCC |
| BCL6B | NT_010823:135 | NM_181844 | 255877 | ZnF-BTB/POZ | Found | B-cell CLL/lymphoma 6, member B (zinc finger protein) | CACTGCGACCCCTGTGGCCTGCATTTCCGGCACAAGAGTCAACTGCGGCTG |
| BG199677 | | BG199677 | | Other | Seed | | ATGCTGATGCCACGGGACCATGGAACAGTGCCACTATTTCCAAGAGCAAC |
| BHC80 | NT_009178:48 | NM_016621 | 51317 | ZnF-PHD | Found | BRAF35/HDAC2 complpex (80 kDa) | AGCAATTCCATAAGTAAATGCATGGAAATGAAGAACACCATCCTGGCCCGGC |
| BHLHB2 | | NM_003670 | 8553 | bHLH | Seed | basic helix-loop-helix domain containing, class B, 2 | GCTCCAAGCTCTGAAGCCAATCCCCCCTTTAAACTTAGAAACCAAAGACT |
| BHLHB3 | | NM_030762 | 79365 | bHLH | Seed | basic helix-loop-helix domain containing, class B, 3 | TGAAATCGCCCATTCAGTCCGACTTGGATGCGTTCCACTCGGGATTTCAA |
| BHLHB5 | | NM_152414 | 27319 | bHLH | Seed | basic helix-loop-helix domain containing, class B, 5 | GTTTAACAGCGTCTCCTCCAGCCTCTGCAAACAGTGCACGGAGAAGCCTT |
| BIA2 | NT_029870:6 | NM_015431 | 25893 | Co-activator | Found | BIA2 protein | TGCGAGGAGGACGAGGCGGCGCTGTGCTGGGTGTGCGACGCCGGCCCCGA |
| BLZF1 | | NM_003666 | 8548 | bZIP | Seed | basic leucine zipper nuclear factor 1 (JEM-1) | GTTGGCATTAACAATCAAAAAAAGATTCCATCAACAGTTGAATTCTGCAG |
| BMI1 | | NM_005180 | 648 | ZnF-Other | Seed | murine leukemia viral (bmi-1) oncogene homolog | AGGAACCTTTAAAGGATTATTATACACTAATGGATATTGCCTACATTTAT |
| BNC | | NM_001717 | 646 | ZnF-C2H2 | Seed | basonuclin | GAAGATCAAGCATAAGTGCACCATCGAAGGGTGTAACATGGTGTTCAGCT |
| BRD1 | | NM_014577 | 23774 | Bromodomain | Seed | bromodomain-containing 1 | TCCTAAGTCCAAAATGGTTCCCCTTGGTATTGACGAAACTATAGACAAGT |
| BRD2 | | NM_005104 | 6046 | Bromodomain | Seed | bromodomain-containing 2 | GAAAAAGCGGGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCA |
| BRD3 | | NM_007371 | 8019 | Bromodomain | Seed | bromodomain-containing 3 | TCTACCAGCCCGTGGACGCAATCAAATTGAACCTGCCGGATTATCATAAA |
| BRD4 | | NM_014299 | 23476 | Bromodomain | Seed | bromodomain-containing 4 | GAAAAAAGAAAAGCACAAAAGAAAAGAGGAAGTGGAAGAGAATAAAAAAA |
| BRD7 | | NM_013263 | 29117 | Bromodomain | Seed | bromodomain-containing 7 | ATTTGAATTATGGGCCCTACAGTTCTTATGCACCGCATTATGACTCCACA |
| BRD9 | NT_034766:148 | NM_023924 | 65980 | Bromodomain | Found | bromodomain containing 9 | |
| BRDT | | NM_001726 | 676 | Bromodomain | Seed | bromodomain, testis-specific | AAAGCGGTTACTGGATGTTAATAATCAGTTAAATTCTAGAAAACGTCAAA |
| BRF1 | | NM_001519 | 2972 | Other | Seed | BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) | ATCTACAAGGAACACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAAT |
| BRF2 | | NM_006887 | 678 | ZnF-C3H | Seed | zinc finger protein 36, C3H type-like 2 | CACACTTCTGTCCGCCTTCTACGATGTCGACTTCTTGTGCAAGACAGAGA |
| BRPF1 | | NM_004634 | 7862 | Bromodomain | Seed | bromodomain and PHD finger containing, 1 | AAGGAGTCGTACTTTGAGAGTCATAATAAAGGCGACCCTAATGCGCTAGT |
| BRPF3 | | AB033112 | 27154 | Bromodomain | Seed | bromodomain and PHD finger containing, 3 | TGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGGGTCTCA |
| BS69 | | NM_006624 | 10771 | ZnF-MYND | Seed | adenovirus 5 E1A binding protein | TGGACAGAAAATGTAAGCAAGTAAAGGAAAAGTGTAAGGAGGAATTTGTA |
| BTAF1 | | AF038362 | 9044 | Other | Seed | BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) | GCCCATCGCATTGGGCAGAAACGTGTGGTTAACGTATACCGATTGATAAC |
| BTBD1 | NT_019601:32 | NM_025238 | 53339 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 1 | CCTGCTCAATCTGGAATTTTGTCAGATCGTGAAGTGGTAAACCTCTTTCTTCA |
| BTBD14A | NT_019501:127 | NM_144653 | 138151 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 14A | CGACCTCGTGGCCCTACCTGCCAGCCTCATCAGCCAGATCGGATACCGCT |
| BTBD14B | NT_031915:27 | NM_052876 | 112939 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 14B | CCCTGGACAGCCGCGTGCTCCACGCTGTCAAGTACTACTGCCAGAACTTC |
| BTBD2 | NT_011268:135 | NM_017797 | 55643 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 2 | CGCACAGGTTCGTGCTGGCCGTGGGCAGCGCCGTCTTTGATGCCATGTTC |
| BTBD3 | | NM_014962 | 22903 | ZnF-BTB/POZ | Seed | BTB (POZ) domain containing 3 | GCAATACCTTTCCCGTATGGTTTGAATACCCAGTGCAGATCGAGCCAGAC |
| BTBD4 | NT_033241:138 | AK023564 | 140685 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 4 | AAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAG |
| BTBD4 | NT_033241:138 | AJ325128 | 65986 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 4 | |
| BTBD5 | NT_025892:1650 | NM_017658 | 54813 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 5 | GGCTTGAATCTTCTTCGCCAACATCACGAACTCTGTGACATCATTCTCCGA |
| BTBD6 | NT_022676:116 | NM_033271 | 90135 | ZnF-BTB/POZ | Found | BTB (POZ) domain containing 6 | |
| BTEB1 | | NM_001206 | 687 | ZnF-C2H2 | Seed | basic transcription element binding protein 1 | AAATCCTCCCATCTCAAAGCCCATTACAGAGTGCATACAGGTGAACGGCC |
| BTF | | NM_014739 | 9774 | Other | Seed | Bcl-2-associated transcription factor | ATACTGGTCCAAACAACTCAAATACTACTTTTCAAAAGAGACCGAAGGAA |
| BTF3 | | NM_001207 | 689 | Other | Seed | basic transcription factor 3 | GGAAAAGCACCACTTGCTACTGGAGAGGATGATGATGATGAAGTTCCAGG |
| BTF3L1 | | NM_001208 | 690 | Other | Seed | basic transcription factor 3, like 1 | AGGAAAAAGGTGGTTCACACGACAGCAGAGGATAAAAAATTTCAGTTCTC |
| BTF3L2 | | M90355 | 691 | Other | Seed | basic transcription factor 3, like 2 | AGCAAATGATAAAAAACGTCAGTTCTCCTTAAAGAAGTTAGAAATCTCTG |
| BTF3L3 | | M90356 | 692 | Other | Seed | basic transcription factor 3, like 3 | CGCTTATATCTGGCGCTGGCAATAGCTGATAATCGATGCACATTAATTGC |
| BX538183 | NT_011109:1331 | BX538183 | | ZnF-C2H2 | Found | | GCCACAGTTCTTCAGTTTCGCCACTTCAAAGAATTTACTCTGGGGTCAAAACCCA |
| BX648737 | NT_006802:14 | BX648737 | | ZnF-C2H2 | Found | | CCCGTTCACAGCAGTATTCAGTTCTCTTTAAACAACTGGGGGTCAACACAGTGCG |
| C11orf13 | | NM_003475 | 8045 | Other | Seed | chromosome 11 open reading frame 13 | TGGTCATCGCACTAGCCCAAGCAATAGGCCAGACTGGCCGCTTTGTGCTT |
| C11orf9 | | NM_013279 | 745 | Other | Seed | chromosome 11open reading frame 9 | TGGGGTCTTTCAGTCAATGGCATTGGCCACTCCAAGCATCACAAGAGTCT |
| C14orf101 | | NM_017799 | 54916 | Other | Seed | chromosome 14 open reading frame 101 | GCTCAACTCTACGCTCAAGCATATGACCTTTATAAGGAGATTGTCTATTT |
| C14orf106 | | NM_018353 | 55320 | Other | Seed | chromosome 14 open reading frame 106 | CACTCCTAACAGAGTTGAAAAAAAAAATTGCAGCATACCTACCTATGTGA |
| C16orf44 | NT_010422:242 | NM_024731 | 79786 | ZnF-BTB/POZ | Found | chromosome 16 open reading frame 44 | GGCAGACGCGAGTGTCTCGGCCATACAAGATCAGCGAATCATCAAAGGTATA |
| C1orf2 | | NM_006589 | 10712 | Other | Seed | chromosome 10 open reading frame 2 | GGGCTCACCATTTGTGCCGCTATAATCTGTACACTCTCTGCTATTGTCTG |
| C20orf174 | | AL713683 | 128611 | ZnF-C2H2 | Seed | chromosome 20 open reading frame 174 | TGTGCCTGGTGCGTTTGCTGTGGAGATCTCTGAGACTGTCGGTTTTTCTA |
| C21orf18 | | NM_017438 | 54093 | Other | Seed | chromosome 21 open reading frame 18 | AGCGTTTAATGAAGAAACTCATTCTTACGAAATTAGAACGACTTCACGTT |
| C3IP1 | NT_034563:155 | NM_021633 | 59349 | ZnF-BTB/POZ | Found | kelch-like protein C3IP1 | |
| C5orf7 | | NM_016604 | 51780 | Jumonji | Seed | chromosome 5 open reading frame 7 | GTTCGGGATTTCTGGGATGGTTTCGAGATCATATGCAAACGACTACGGTC |
| CART1 | | NM_006982 | 8092 | Homeobox | Seed | cartilage paired-class homeoprotein 1 | TGTATGACACCTTATTCTCACTCGCCTCGGACAGATTCCAGTTACACGGG |
| CBF2 | | NM_005760 | 10153 | Beta-scaffold-CCAAT | Seed | CCAAT-box-binding transcription factor | GGATTTCACTCTAATGAGATTTTTGGATCGATTTGTATACCGAAATCCAA |
| CBFA2T1 | | NM_004349 | 862 | ZnF-MYND | Seed | core-binding factor, runt domain, alpha subunit 2; translocated to, 1; cyclin D-related | AAGAATTGAATTACTGGATCCGGCGGTACAGTGACGCCGAGGACTTAAAA |
| CBFA2T2 | NT_028392:284 | NM_005093 | 9139 | ZnF-MYND | Found | core-binding factor, runt domain, alpha subunit 2; translocated to, 2 | CAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTCAACTACTGGA |
| CBFA2T3 | | NM_005187 | 863 | ZnF-MYND | Seed | core-binding factor, runt domain, alpha subunit 2; translocated to, 3 | CCCACGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTCTGTCTCTTG |
| CBX1 | | NM_006807 | 10951 | Structural | Seed | chromobox homolog 1 (Drosophila HP1 beta) | ACAGCACATGAGACAGATAAATCAGAGGGAGGCAAGCGCAAAGCTGATTC |
| CBX2 | | X77824 | 876 | Structural | Seed | chromobox homolog 2 (Drosophila Pc class) | CTTACTCCCCTTCCCTGCCTATGGTGTCGCTTGGCTAAGTGACTCCCAGC |
| CBX3 | | NM_007276 | 11335 | Structural | Seed | chromobox homolog 3 (Drosophila HP1 gamma) | GAAAATTTAGATTGTCCAGAATTGATTGAAGCGTTTCTTAACTCTCAGAA |
| CBX4 | | NM_003655 | 8535 | Structural | Seed | chromobox homolog 4 (Drosophila Pc class) | GAATATAATTATCACCGACGTCACCGCGAACTGCCTCACCGTTACTTTCA |
| CBX5 | | NM_012117 | 23468 | Structural | Seed | chromobox homolog 5 (Drosophila HP1 alpha) | GGTGCTAGACAGGCGCGTGGTTAAGGGACAAGTGGAATATCTACTGAAGT |
| CBX6 | | NM_014292 | 23466 | Structural | Seed | chromobox homolog 6 | CCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGG |
| CBX7 | | NM_175709 | 23492 | Structural | Seed | chromobox homolog 7 | AGAGAGACCGAGCATCGGGGTATAGGAAGAGAGGTCCGAAACCCAAGCGG |
| CBX8 | | NM_020649 | 57332 | Structural | Seed | chromobox homolog 8 (Drosophila Pc class) | ACCTCAAACTTTTTGACCGTCACCATTAAGGAAAGTAACACGGACCAAGG |
| CCT4 | | NM_006430 | 10575 | Co-activator | Seed | chaperonin containing TCP1, subunit 4 (delta) | ACTGAATATTCACGAACACTGAGTGGTATGGAATCCTACTGCGTTCGTGC |
| CDK5 | NT_007914:1050 | NM_004935 | 1020 | Co-activator | Found | cyclin-dependent kinase 5 | |
| CDK7 | | NM_001799 | 1022 | Co-activator | Seed | cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase) | AGCTTTGGCAATAAAAAGGAAAAGAACAGAGGCCTTAGAACAAGGAGGAT |
| CDK8 | | NM_001260 | 1024 | Co-activator | Seed | cyclin-dependent kinase 8 | TCAGGTGGACTTATCATGACCTCAGACTATCAGCGTTCCAATCCACATGC |
| CDR2 | | M63256 | 1039 | Co-repressor | Seed | cerebellar degeneration-related protein 2, 62kDa | GCTGTATGACCTCCGCCAACACTTCGTGTATGATCATGTGTTCGCTGAGA |
| CDX1 | | NM_001804 | 1044 | Homeobox | Seed | caudal-type homeobox transcription factor 1 | GAGAAGGAGTTTCATTACAGCCGTTACATCACAATCCGGCGGAAATCAGA |
| CDX2 | | NM_001265 | 1045 | Homeobox | Seed | caudal-type homeobox transcription factor 2 | GGGCTCTCTGAGAGGCAGGTTAAAATCTGGTTTCAGAACCGCAGAGCAAA |
| CDX4 | | NM_005193 | 1046 | Homeobox | Seed | caudal-type homeobox transcription factor 4 | TGCTGTTCGTGGATTTCAACCTATTGAGATACAGCAGGTTATAGTCTCCG |
| CEBPA | | NM_004364 | 1050 | bZIP | Seed | CCAAT/enhancer binding protein (C/EBP), alpha | AACGTGGAGACGCAGCAGAAGGTGCTGGAGCTGACCAGTGACAATGACCG |
| CEBPB | | NM_005194 | 1051 | bZIP | Seed | CCAAT/enhancer binding protein (C/EBP), beta | TGCCTTTAAATCCATGGAAGTGGCCAACTTCTACTACGAGGCGGACTGCT |
| CEBPD | | NM_005195 | 1052 | bZIP | Seed | CCAAT/enhancer binding protein (C/EBP), delta | AACCAGGAGATGCAGCAGAAGTTGGTGGAGCTGTCGGCTGAGAACGAGAA |
| CEBPE | | NM_001805 | 1053 | bZIP | Seed | CCAAT/enhancer binding protein (C/EBP), epsilon | TGGCCCCTTACACAAGGGCAAGAAGGCAGTGAACAAAGATAGCCTTGAGT |
| CEBPG | | NM_001806 | 1054 | bZIP | Seed | CCAAT/enhancer binding protein (C/EBP), gamma | ACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACAG |
| CECR6 | | NM_031890 | 27439 | Bromodomain | Seed | cat eye syndrome chromosome region, candidate 6 | GGGGTGCTCATGGCTATGTCAACACCCTGGCTGTGGCCTCTCAGAATTGA |
| CERD4 | | NM_012074 | 8110 | ZnF-PHD | Seed | D4, zinc and double PHD fingers, family 3 | GAGGATTTGGAAGAGGATATTCCCAAGCGAAAGGACAGGACTAGAGGACG |
| CEZANNE | | NM_020205 | 56957 | Co-repressor | Seed | cellular zinc finger anti-NF-kappaB Cezanne | TGATAGTGACAATGTCCGATTGGCCAGTGTAATTCTGTCCCTAGAGGTCA |
| CG9879 | | AI217897 | | Other | Seed | CG9879 (fly) homolog | TCAGTCTCGGCAGAAGAGAAGTGGGTTAAAGACTCCACCACCCGAAGGCA |
| CGI-149 | | NM_016079 | 51652 | Other | Seed | CGI-149 protein | TGGGATCATAGAGGAGATGTTAGAGGACACTTTTGAAAGCATGGACGATC |
| CGI-85 | | NM_017635 | 54794 | Structural | Seed | CGI-85 protein | CTCCAGCTAAGCGCTTGAGGTTAATAGTTGGAAAAGACTCTATAGATATT |
| CGI-99 | | NM_016039 | 51637 | Other | Seed | CGI-99 protein | GCGTCATGATGATTACCTGGTAATGCTTAAGGCAATTCGGATTTTGGTTC |
| CHD1 | | NM_001270 | 1105 | Structural | Seed | chromodomain helicase DNA binding protein 1 | TGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGCTTG |
| CHD1L | | NM_024568 | 9557 | Structural | Seed | chromodomain helicase DNA binding protein 1-like | TCTGCTGAGCTGGATTACCAAGACCCAGATGCTACTTCCCTCAAGTACGT |
| CHD2 | | NM_001271 | 1106 | Structural | Seed | chromodomain helicase DNA binding protein 2 | CTGAAAATCGGAGACCGGATAGCCGAGTGCCTTAAAGCCTACTCAGATCA |
| CHD3 | | NM_001272 | 1107 | Structural | Seed | chromodomain helicase DNA binding protein 3 | CGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGA |
| CHD4 | | NM_001273 | 1108 | Structural | Seed | chromodomain helicase DNA binding protein 4 | GCATGTCCTTACTAGAATTGGTGTTATGTCTTTGATTCGCAAGAAGGTTC |
| CHD5 | | NM_015557 | 26038 | Structural | Seed | chromodomain helicase DNA binding protein 5 | ATTGTCAACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTA |
| CHD6 | | NM_032221 | 84181 | Structural | Seed | chromodomain helicase DNA binding protein 6 | AGCCAAGCCGAGAAATCCATTCCCAGCAAGAGTCTGCTTGACTGGCTAAG |
| CHES1 | | NM_005197 | 1112 | Forkhead | Seed | checkpoint suppressor 1 | GCCAGTGCCATGATGCTTTTGAATACTCCCCCTGAGATACAAGCAGGTTT |
| CHX10 | | XM_063425 | 122965 | Homeobox | Seed | ceh-10 homeo domain containing homolog (C. elegans) | AACAGCATTGCGGTGCTCCGGGCCAAAGCTCAGGAGCACAGCACCAAAGT |
| CIAO1 | | NM_004804 | 9391 | Co-repressor | Seed | WD40 protein Ciao1 | TGGCGTCTTGTAGTGATGACCGTACTGTGCGTATCTGGCGTCAGTATCTA |
| CIC | | NM_015125 | 23152 | Beta-scaffold-HMG | Seed | capicua homolog (Drosophila) | TCCAAGGTTTGTCTGCAGTTGAAGATCCGTGAGGTGCGCCAGAAGATCAT |
| CIR | | NM_004882 | 9541 | Co-repressor | Seed | CBF1 interacting corepressor | AATCACATTCATTATTTCTCAGGTTCGAAATGTGAGGTGCATTAAATGTC |
| CITED1 | | NM_004143 | 4435 | Other | Seed | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 | CTGGGGCAGAATGAGTTTGACTTCACTGCGGACTTTCCATCTAGCTGCTA |
| CITED2 | | NM_006079 | 10370 | Other | Seed | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 | GGCTGGGGCAAAACGAGTTTGATTTTATGACGGACTTCGTGTGCAAACAG |
| CIZ1 | NT_029366:585 | NM_012127 | 25792 | ZnF-C2H2 | Found | Cip1-interacting zinc finger protein | CACCAGCAGCGGCTAGGGGAGATCCAGCACATGAGCCAAGCCTGCCTCCT |
| CLOCK | | NM_004898 | 9575 | bHLH | Seed | clock (mouse) homolog | GACACAGAGCACTCTTACAGCCCCACTGTATAACACTATGGTGATTTCTC |
| CNOT3 | | NM_014516 | 4849 | Other | Seed | CCR4-NOT transcription complex, subunit 3 | AGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGG |
| CNOT4 | | NM_013316 | 4850 | Other | Seed | CCR4-NOT transcription complex, subunit 4 | CCAGCAAAACCCCCACAGATTTACTACAGAGTTCAACACTGGACCGCCAT |
| CNOT8 | | NM_004779 | 9337 | Other | Seed | CCR4-NOT transcription complex, subunit 8 | GAGGAACATGAATTCTTACATATTCTGAACCTTTTCTCCCCATCCATTTA |
| COPEB | | NM_001300 | 1316 | ZnF-C2H2 | Seed | core promoter element binding protein | CAAGTTTACCTCCGACCCCATTGGCGAAGTTTTGGTCAGCTCGGGAAAAT |
| COPS5 | | NM_006837 | 10987 | Co-activator | Seed | COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) | TGGGACGAGGGAGTTTCATGTTGGGTTTAGAAACGCATGACCGAAAATCA |
| CORO1A | | NM_007074 | 11151 | bZIP | Seed | coronin, actin-binding protein, 1A | ATCACTTCCGAGGCCCCTTTCCTGCACTATCTCTCCATGTTCAGTTCCAA |
| CREB1 | | NM_004379 | 1385 | bZIP | Seed | cAMP responsive element binding protein 1 | GGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGC |
| CREB3 | | NM_006368 | 10488 | bZIP | Seed | cAMP responsive element binding protein 3 (luman) | GATGGCTTCCTACTGGTAGCCCCTCTGTCATTTTGCAGGACAGATACTCA |
| CREB3L1 | | NM_052854 | 90993 | bZIP | Seed | cAMP responsive element binding protein 3-like 1 | AGAACAATGAACTGTGGAAGAAGGTGGAGACCCTGGAGAATGCCAACAGG |
| CREB3L2 | NT_007933:5606 | NM_194071 | 64764 | bZIP | Found | cAMP responsive element binding protein 3-like 2 | GTGAGATCCAGAAACCTGCTGATCTACGAGGAACATTCTCCCCCAGAGGAG |
| CREB3L3 | NT_011255:184 | NM_032607 | 84699 | bZIP | Found | cAMP responsive element binding protein 3-like 3 | GATCCGGTGGACCTGTCCCCACGATGCAATCTCACCGTGAAAGACCTCCT |
| CREB3L4 | NT_004858:17 | NM_130898 | 148327 | bZIP | Found | cAMP responsive element binding protein 3-like 4 | GGCCAAATGTAGGCCTTATCTCCATCCAGCTAGATCAGTGGAGCCCAGCA |
| CREB5 | | NM_004904 | 9586 | bZIP | Seed | cAMP responsive element binding protein 5 | CCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAA |
| CREBBP | | NM_004380 | 1387 | ZnF-PHD | Seed | CREB binding protein (Rubinstein-Taybi syndrome) | CAACATGGCGAGTATGAATCCACAGTACCGAGAAATGTTACGGAGGCAGC |
| CREBL1 | | NM_004381 | 1388 | bZIP | Seed | cAMP responsive element binding protein-like 1 | GATGACCCAACATCCTCATTTGAAACCGTCCAGATCAACGTTATCCCCAC |
| CREBL2 | | NM_001310 | 1389 | bZIP | Seed | cAMP responsive element binding protein-like 2 | GATATCAGTATTTGGAAGAGTTGGTATCCAGTCGAGAAAGAGCTATATGT |
| CREG | | NM_003851 | 8804 | Other | Seed | cellular repressor of E1A-stimulated genes | AGCCATAATTGGTTCTTTGCTAAGTTGAATATAACCAATATCTGGGTCCT |
| CREM | | NM_001881 | 1390 | bZIP | Seed | cAMP responsive element modulator | AGCTGTAACTCTAGTGCAGTTACCTTCGGGCCAAACTATACATGTCCAGG |
| CRIP1 | | NM_001311 | 1396 | Co-activator | Seed | cysteine-rich protein 1 (intestinal) | CGGAGCCGTCATGCCCAAGTGTCCCAAGTGCAACAAGGAGGTGTACTTCG |
| CRIP2 | | NM_001312 | 1397 | Co-activator | Seed | cysteine-rich protein 2 | CAAATGCCCCAAGTGCGACAAGACCGTGTACTTCGCCGAGAAGGTGAGCT |
| CROC4 | | NM_006365 | 10485 | Other | Seed | transcriptional activator of the c-fos promoter | GGAGACCAAAAAGAAGAATGTACTTCATCTGGTTGGGCTGGATTCCCTCT |
| CRSP2 | | NM_004229 | 9282 | Co-activator | Seed | cofactor required for Sp1 transcriptional activation, subunit 2, 150kD | GGCAGACATTCCCAGACAGCAGAACTCTTCTGTTGCTGCTCCCATGATGG |
| CRSP3 | | NM_004830 | 9439 | Co-activator | Seed | cofactor required for Sp1 transcriptional activation, subunit 3, 130kD | TGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCATGCGATCATTGGC |
| CRSP6 | | NM_004268 | 9440 | Co-activator | Seed | cofactor required for Sp1 transcriptional activation, subunit 6, 77kD | GTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT |
| CRSP7 | | NM_004831 | 9441 | Co-activator | Seed | cofactor required for Sp1 transcriptional activation, subunit 7, 70kD | CGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCATGACGAGACAGATCAA |
| CRSP8 | | NM_004269 | 9442 | Co-activator | Seed | cofactor required for Sp1 transcriptional activation, subunit 8, 34kD | CATTGAAGCGTTCCGCTAATCAGATGGGAGTATCTGCCAAACGTAGACCA |
| CRSP9 | | NM_004270 | 9443 | Co-activator | Seed | cofactor required for Sp1 transcriptional activation, subunit 9, 33kD | GAAAGATGCTGCCTTGTGTGTCCTAATTGATGAGATGAATGAAAGACCAT |
| CRX | | NM_000554 | 1406 | Homeobox | Seed | cone-rod homeobox | GGAAATTCACCTACAATCCCATGGACCCTCTGGACTACAAGGATCAGAGT |
| CSDA | | NM_003651 | 8531 | Beta-scaffold-cold-shock | Seed | cold shock domain protein A | ATAAAGAAAATCAGCAAGCCACCAGTGGTCCAAACCAGCCGTCTGTTCGC |
| CSEN | | NM_013434 | 30818 | Other | Seed | Calsenilin, presenilin-binding protein, EF hand transcription factor | TTTAAGAATGAGTGTCCCACGGGCCTGGTGGACGAAGACACCTTCAAACT |
| CSRP1 | | NM_004078 | 1465 | Co-activator | Seed | cysteine and glycine-rich protein 1 | GATGGCGAGATTTACTGCAAAGGATGTTATGCTAAAAACTTCGGGCCCAA |
| CSRP2 | | NM_001321 | 1466 | Co-activator | Seed | cysteine and glycine-rich protein 2 | TGCAAATCCTGCTACGGAAAGAAGTATGGGCCAAAAGGCTACGGTTATGG |
| CSRP3 | | NM_003476 | 8048 | Co-activator | Seed | cysteine and glycine-rich protein 3 (cardiac LIM protein) | TATTGCAAAGTTTGCTATGCCAAAAATTTTGGCCCCACGGGTATTGGGTT |
| CTCF | | NM_006565 | 10664 | ZnF-C2H2 | Seed | CCCTC-binding factor (zinc finger protein) | ACATTTACACGTCGGAATACCATGGCAAGACATGCTGATAATTGTGCTGG |
| CTCFL | NT_011362:1953 | NM_080618 | 140690 | ZnF-C2H2 | Found | CCCTC-binding factor (zinc finger protein)-like | CTTTTCCCGCTGGATTAACCTGCACAGACATTCGGAGAAGTGTGGATCAGG |
| CTNNB1 | | NM_001904 | 1499 | Co-activator | Seed | catenin (cadherin-associated protein), beta 1, 88kD | GGAGAACCCCTTGGATATCGCCAGGATGATCCTAGCTATCGTTCTTTTCA |
| CUTL1 | | NM_001913 | 1523 | Homeobox | Seed | cut (Drosophila)-like 1 (CCAAT displacement protein) | TTCTTCTACACACTGTTCCTGCACTGCCTGGTCTTCCTGGTGCTCTACAA |
| CUTL2 | | AB006631 | 23316 | Homeobox | Seed | cut-like 2 (Drosophila) | GATGGCCAATCTGAACAACATCATTTACCGACTAGAGCGGGCTGCCAATC |
| CXorf6 | | NM_005491 | 10046 | Other | Seed | chromosome X open reading frame 6 | CTGGAGACGTGTCACCGTCTAACATTACTCATGTAGACAAAGCCTGCAAG |
| DACH | | NM_004392 | 1602 | Co-repressor | Seed | dachshund (Drosophila) homolog | GATTTGGCCGGTCATGACATGGGACATGAGTCAAAAAGGATGCATATTGA |
| DAT1 | | NM_018640 | 55885 | ZnF-Other | Seed | neuronal specific transcription factor DAT1 | CCTAAAGAATAACATGATCCTTTGCCAGACGGACTACGAGGAAGGTTTAA |
| DATF1 | | NM_022105 | 11083 | ZnF-PHD | Seed | death associated transcription factor 1 | CGCCGTCACTGTTGTATAAATGTATGTATCACCTAGGGGTTGGCCTCCTG |
| DBP | | NM_001352 | 1628 | bZIP | Seed | D site of albumin promoter (albumin D-box) binding protein | CCACGAGACCTTTGACCCTCGAAGACATCGCTTCTCAGAAGAGGAACTTA |
| DDIT3 | | NM_004083 | 1649 | bZIP | Seed | DNA-damage-inducible transcript 3 | AAAGTGGCACAGCTAGCTGAAGAGAATGAACGGCTCAAGCAGGAAATCGA |
| DEAF1 | | NM_021008 | 10522 | ZnF-MYND | Seed | deformed epidermal autoregulatory factor 1 (Drosophila) | AAGCTGCGTTGCCAACGTCACATCCCAAAATAGTGTTGACATCCCTGCCT |
| DKFZP434B0335 | | AB037779 | 25851 | Other | Seed | DKFZP434B0335 protein | GGATTGAGATGGTTGGTGAGATGACGATGGTGAACGTGGGAATGAACGAC |
| DKFZP434B195 | | NM_031284 | 83440 | Other | Seed | hypothetical protein DKFZp434B195 | GCCATTTCAGCCGAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTA |
| DKFZp434G043 | | AL080134 | | bHLH | Seed | HLHmdelta (fly) homolog | GGGCCTGGAGTTGGAGCTCAACAGCAATGGATTTCAGAGACCACCCTGAA |
| DKFZP434P1750 | | NM_015527 | 26000 | Other | Seed | DKFZP434P1750 protein | CAATAGCACCCCCTTGGGTTCCAGCAAGGAGACCCGGAAGCAGGAGAAGG |
| DKFZp547B0714 | NT_011233:43 | NM_152606 | 163255 | ZnF-C2H2 | Found | hypothetical protein DKFZp547B0714 | GCTGTGACTCACACTTGGTTCAACATGGGAAAATAGATTCTGATGTGAAACATGA |
| DKFZp564D0472 | | AL110179 | | Other | Seed | hypothetical protein | CACCTATAAGTATGAGAAAGGTTTCCATGTCTCCTACCCCTCACTGCACT |
| DKFZp686B0797 | NT_011192:144 | NM_198539 | 374900 | ZnF-C2H2 | Found | hypothetical protein DKFZp686B0797 | CAGGTCAAGAAGCAACAGGAAACACTTGTGAGGAAAGTCACATCCATCTCCAA |
| DKFZp686B2197 | NT_011104:32b | NM_194319 | 147974 | ZnF-C2H2 | Found | hypothetical protein DKFZp686B2197 | CAATGCGGGAAGTCCTTTAGCTGCAGCTCTCACCTTACTCGACACTGTAGAATGT |
| DKFZp761B128 | NT_033248:41 | NM_152437 | 144348 | ZnF-C2H2 | Found | hypothetical protein DKFZp761B128 | |
| DKFZp761B128 | NT_035239:20 | NM_152437 | 144348 | ZnF-C2H2 | Found | hypothetical protein DKFZp761B128 | |
| DKFZp762I137 | NT_007914:754 | NM_152411 | 136051 | ZnF-C2H2 | Found | hypothetical protein DKFZp762I137 | ACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGT |
| DLX1 | | XM_087198 | 1745 | Homeobox | Seed | distal-less homeobox 1 | AGGACGATTTATTCCAGTTTGCAGTTGCAGGCTTTGAACCGGAGGTTCCA |
| DLX2 | | NM_004405 | 1746 | Homeobox | Seed | distal-less homeobox 2 | TGAGCCTGAAATTCGGATAGTGAACGGGAAGCCAAAGAAAGTCCGGAAAC |
| DLX3 | | NM_005220 | 1747 | Homeobox | Seed | distal-less homeobox 3 | AGCACAGTCCCAATAACAGTGATTCCATGGCCTGCAACTCACCACCATCA |
| DLX4 | | NM_001934 | 1748 | Homeobox | Seed | distal-less homeobox 4 | TATGGCAACAGCTTTGGACCCTGGTATCAGCATCACTCCTCAGATGTCCT |
| DLX5 | | NM_005221 | 1749 | Homeobox | Seed | distal-less homeobox 5 | AGAAAGTTCGTAAACCCAGGACTATTTATTCCAGCTTTCAGCTGGCCGCA |
| DLX6 | | NM_005222 | 1750 | Homeobox | Seed | distal-less homeobox 6 | AGCTCCAGGCTTTAAACCATCGCTTTCAGCAGACACAGTATCTGGCCCTT |
| DMRT1 | | NM_021951 | 1761 | ZnF-DM | Seed | doublesex and mab-3 related transcription factor 1 | GCCGTCTCTGTTTCCTTATTACAACAATCTATACAACTGCCCGCAGTACT |
| DMRT2 | | NM_006557 | 10655 | ZnF-DM | Seed | doublesex and mab-3 related transcription factor 2 | CTCCTTGGATTATTCTACAGCTATTATGTGTACATAATGAACCATCTTTA |
| DMRT3 | NT_008413:158 | NM_021240 | 58524 | ZnF-DM | Found | doublesex and mab-3 related transcription factor 3 | AGAGCGAACTTCCGCAGAACCTGAGAGTCTAGCGTTGCCCTCCAATGGGCA |
| DMRTA1 | NT_023974:296 | AJ290954 | 63951 | ZnF-DM | Found | DMRT-like family A1 | AAAGACTTGACTGCGACCAAGGCAAGCCTTCCGACAGTGTCCTCAAGACC |
| DMRTA2 | | AJ301580 | 63950 | ZnF-DM | Seed | DMRT-like family A2 | TAAGGTGGTTTTTGGGTTTTGTTTAGGAGGGTGGGTGGGGAAGGCTGAGC |
| DMRTB1 | NT_004424:223 | NM_033067 | 63948 | ZnF-DM | Found | DMRT-like family B with proline-rich C-terminal, 1 | CCTGCGCAGGCCGATGCGGACCGTGCCCGGCCCACTGTTCACCGACTTTGT |
| DMRTC1 | | BC029799 | 63947 | ZnF-DM | Seed | DMRT-like family C1 | TGTGATTGCTGACATACCTGTGCACTCATGTGTATACCCCTGCATGTGGA |
| DMRTC2 | NT_011139:240 | NM_033052 | 63946 | ZnF-DM | Found | DMRT-like family C2 | CTGAGGAACACTTAGAGGGTGGGCAGAAGCGGGGGTTCCCAGTCTGCTTGT |
| DMTF1 | | NM_021145 | 9988 | Other | Seed | cyclin D binding Myb-like transcription factor 1 | ATGTTATAGATACTGAATCTGTCTTGCCTTTGACAACACTAACAGATCCC |
| DR1 | | NM_001938 | 1810 | Co-repressor | Seed | down-regulator of transcription 1, TBP-binding (negative cofactor 2) | CAGAGCATGTCATACAAGCACTAGAAAGTTTGGGATTTGGCTCTTACATC |
| DRAP1 | | NM_006442 | 10589 | Co-repressor | Seed | DR1-associated protein 1 (negative cofactor 2 alpha) | ATGAATCTGAGGACACAGATACTGATGGGGAAGAGGAGACATCACAACCC |
| DRIL1 | | NM_005224 | 1820 | Structural | Seed | dead ringer (Drosophila)-like 1 | AGCATCAGCATGTCGGTGGAGATCAACGGCATCATGTACACAGGAGTTCT |
| DRIL2 | | NM_006465 | 10620 | Structural | Seed | dead ringer (Drosophila)-like 2 (bright and dead ringer) | TGTCTTTCTCAGGGGTTTGGTCACAAAGGATGGACTCTTCCCACCCAGAG |
| DRPLA | | NM_001940 | 1822 | Co-repressor | Seed | dentatorubral-pallidoluysian atrophy (atrophin-1) | AGGCTAGCTTTGAACCCCATCCTTCTGTGACACCCACTGGATATCATGCT |
| DSIPI | | NM_004089 | 1831 | bZIP | Seed | delta sleep inducing peptide, immunoreactor | ATGGATCTGGTGAAGAATCATCTGATGTATGCTGTGAGAGAGGAGGTGGA |
| DTX2 | | AB040961 | 57652 | ZnF-Other | Seed | deltex homolog 2 (Drosophila) | CTCAGTTAAGAGATTGAGGAAAATGTCCGTGAAAGAAGCGACCCCGAAGC |
| DUX1 | | NM_012146 | 26584 | Homeobox | Seed | double homeobox 1 | CCAGGGTCCAGATTTGGTTTCAGAATGAGAGATCATGCCAGTTGAGGCAG |
| DUX2 | | NM_012147 | 26583 | Homeobox | Seed | double homeobox 2 | AGATTCTGTTTCAGAATGAGAGGTCATGCCAGCTGAGGCAGCACTGGCAT |
| DUX3 | | NM_012148 | 26582 | Homeobox | Seed | double homeobox genes 3 | CCAGGGTCCAGATTTGGTTTCAGAATGAGAGATCATGCCAGTTGAGGCAG |
| DUX4 | | NM_033178 | 22947 | Homeobox | Seed | double homeobox, 4 | AGGACGACGGAGGCGTGATTTTGGTTTCCGAGTGGCTTTGCCCTCCCGAA |
| DUX5 | | NM_012149 | 26581 | Homeobox | Seed | double homeobox 5 | CCAGGGTCCAGATTTGGTTTCAGAATGAGAGATCATGCCAGTTGAGGCAG |
| DXYS155E | | NM_005088 | 8227 | Other | Seed | DNA segment on chromosome X and Y (unique) 155 expressed sequence | TTCTTTTGATTCGACCAAACACCTGAGTGATGCCTCAATTAAGAAGCGGC |
| E2F1 | | NM_005225 | 1869 | E2F | Seed | E2F transcription factor 1 | GAACTTTCAGATCTCCCTTAAGAGCAAACAAGGCCCGATCGATGTTTTCC |
| E2F2 | | NM_004091 | 1870 | E2F | Seed | E2F transcription factor 2 | ATCAGCGATCTCTTCGACTCCTACGACCTTGGGGACCTGTTGATTAATTG |
| E2F3 | | NM_001949 | 1871 | E2F | Seed | E2F transcription factor 3 | GTTAGCTTATGTTACATATCAAGATATTCGAAAAATTAGTGGCCTTAAAG |
| E2F4 | | NM_001950 | 1874 | E2F | Seed | E2F transcription factor 4, p107/p130-binding | CGGGAGACCACGATTATATCTACAACCTGGACGAGAGTGAAGGTGTCTGT |
| E2F5 | | NM_001951 | 1875 | E2F | Seed | E2F transcription factor 5, p130-binding | GTGCTGCTTATAAATAAAGAGTCGAGTTCATCTAAGCCCGTGGTTTTTCC |
| E2F6 | | NM_001952 | 1876 | E2F | Seed | E2F transcription factor 6 | GACTCTATCACAGTGCACATAAGGAGCACCAACGGACCTATCGATGTCTA |
| E4F1 | | NM_004424 | 1877 | ZnF-C2H2 | Seed | E4F transcription factor 1 | TGCACAGAGAAAATCCGCTTCAGTGTGAGCAAGGACGTGGTTGTCAGCAA |
| EBF | | AF208502 | 1879 | bHLH | Seed | early B-cell factor | CCAGGCAGATTCATTTATACAGCGCGCAACGAACCCACCATCGATTATGG |
| EBF2 | NT_023666:195 | NM_022659 | 64641 | bHLH | Found | early B-cell factor 2 | ACCGGCTCTCCTTATGGAATCATGTCATTAAGTCCCACCGTTGGGTCTTCCAG |
| EED | | NM_003797 | 8726 | Structural | Seed | embryonic ectoderm development | GACATACATAGGAATTATGTTGATTGTGTGCGATGGTTAGGCGATTTGAT |
| EGLN1 | NT_004753:53 | NM_022051 | 54583 | ZnF-MYND | Found | egl nine homolog 1 (C. elegans) | |
| EGLN2 | | NM_017555 | 54750 | ZnF-MYND | Seed | egl nine homolog 2 (C. elegans) | CATCACCTGTATCTATTACCTGAATCAGAACTGGGACGTTAAGGTAGGGG |
| EGR1 | | NM_001964 | 1958 | ZnF-C2H2 | Seed | early growth response 1 | ACAGGGCTTTCGGACATGACAGCAACCTTTTCTCCCAGGACAATTGAAAT |
| EGR2 | | NM_000399 | 1959 | ZnF-C2H2 | Seed | early growth response 2 (Krox-20 (Drosophila) homolog) | GGACCCAGGTCTCTTCCCAATGATCCCAGACTATCCTGGATTCTTTCCAT |
| EGR3 | | NM_004430 | 1960 | ZnF-C2H2 | Seed | early growth response 3 | CCTACTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA |
| EGR4 | | NM_001965 | 1961 | ZnF-C2H2 | Seed | early growth response 4 | GAGGCTCGTTTTCCCGTAATAGGGACCAAGATTGAGGACTTGCTGTCCAT |
| EHF | | NM_012153 | 26298 | Trp cluster-Ets | Seed | ets homologous factor | TTGTTGGACAGCAAAACTTTCTGCCGGGCTCAGATCTCCATGACAACCAC |
| EHZF | NT_011044:150 | NM_015461 | 25925 | ZnF-PHD | Found | early hematopoietic zinc finger | TTCTGTTCCGAAGTTGTCAACGACCTCAACACTCTTCAGGAACACATCCGATGTT |
| ELD/OSA1 | | NM_020732 | 57492 | Structural | Seed | BRG1-binding protein ELD/OSA1 | CTGCTGTCGGCGTTTGACCTTCCACGTGACAGTTCTTCACAATTCCTTTC |
| ELF1 | | M82882 | 1997 | Trp cluster-Ets | Seed | E74-like factor 1 (ets domain transcription factor) | AGGTCCTTACTAGCAATGTTCAGACCATTTGCAATGGAACCGTCAGTGTG |
| ELF2 | | NM_006874 | 1998 | Trp cluster-Ets | Seed | E74-like factor 2 (ets domain transcription factor) | TGTTTCAATAGCCCATGGTACACCTGTAATGAGACTATCAATGCCTACTC |
| ELF3 | | NM_004433 | 1999 | Trp cluster-Ets | Seed | E74-like factor 3 (ets domain transcription factor, epithelial-specific ) | AAAAAGAACAGCAACATGACCTACGAGAAGCTGAGCCGGGCCATGAGGTA |
| ELF4 | | NM_001421 | 2000 | Trp cluster-Ets | Seed | E74-like factor 4 (ets domain transcription factor) | CATGTCAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAGCGATATCC |
| ELF5 | | NM_001422 | 2001 | Trp cluster-Ets | Seed | E74-like factor 5 (ets domain transcription factor) | ACTACTATAAAACAGGAATTTTGGAGCGGGTTGACCGAAGGTTAGTGTAC |
| ELK1 | | NM_005229 | 2002 | Trp cluster-Ets | Seed | ELK1, member of ETS oncogene family | CTTTGCCCCCAGAAGTGAAAGTAGAAGGGCCCAAGGAAGAGTTGGAAGTT |
| ELK3 | | NM_005230 | 2004 | Trp cluster-Ets | Seed | ELK3, ETS-domain protein (SRF accessory protein 2) | TCCTCTTTAATGTTGCCAAACGCTGCCAGTATTTCATCCGCCTCACCCTT |
| ELK4 | | NM_021795 | 2005 | Trp cluster-Ets | Seed | ELK4, ETS-domain protein (SRF accessory protein 1) | TTTCTGTTACTTAGGTTTGTCTTAGAAAGGTTATGTGTGACTGTCATGTG |
| EME2 | NT_010552:331 | AK074080 | 197342 | ZnF-BTB/POZ | Found | essential meiotic endonuclease 1 homolog 2 (S. pombe) | AGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGCCCAGTAT |
| EMX1 | | X68879 | 2016 | Homeobox | Seed | empty spiracles homolog 1 (Drosophila) | AAGGTGTGGTTCCAGAACCGGAGGACAAAGTACAAACGGCAGAAGCTGGA |
| EMX2 | | NM_004098 | 2018 | Homeobox | Seed | empty spiracles homolog 2 (Drosophila) | AGAAAAAAGGGACGCACCATATTAACCGGTGGAGAATCGCCACCAAGCAG |
| EN1 | | NM_001426 | 2019 | Homeobox | Seed | engrailed homolog 1 | ACTTTTTCATCGACAACATCCTGAGGCCGGACTTCGGCTGCAAAAAGGAG |
| EN2 | | NM_001427 | 2020 | Homeobox | Seed | engrailed homolog 2 | AGGTCCCAGGTCTCGAAAACCAAAGAAGAAGAACCCGAACAAAGAGGACA |
| ENC1 | NT_006713:275 | NM_003633 | 8507 | ZnF-BTB/POZ | Found | ectodermal-neural cortex (with BTB-like domain) | TCCGAGAAGGCGTTAGCAACGCCGCAGTAGTGAGTGCCAAACTTAAGTTATTTGC |
| ENO1 | | NM_001428 | 2023 | Other | Seed | enolase 1 | GCTGAAGACTGCTATTGGAAAGCCTGGCCTACACTGTAAAGGTGGTCATG |
| EOMES | | NM_005442 | 8320 | T-box | Seed | eomesodermin (Xenopus laevis) homolog | TAATGAAAATTCACCCTCCATAAAGTGTGGGGACATTAATGCTGAAGAGT |
| EP300 | | NM_001429 | 2033 | Co-activator | Seed | E1A binding protein p300 | CCGCAGCAGCGGATGCAGCATCACATGCAACAGATGCAACAAGGAAATAT |
| EP400 | | NM_015409 | 57634 | Structural | Seed | E1A binding protein p400 | AGGACGACAGCGACATCTACCTCGACTCGGTCATGTGTCTCATGTATGAA |
| EPAS1 | | NM_001430 | 2034 | bHLH | Seed | endothelial PAS domain protein 1 | TTGATGCCGGACAAGCCACTGAGCGCAAATGTACCCAATGATAAGTTCAC |
| EPLIN | | NM_016357 | 51474 | Other | Seed | epithelial protein lost in neoplasm beta | AATCTCCACAAGAACCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAAC |
| ERCC2 | | X52221 | 2068 | Other | Seed | excision repair cross-complementing rodent repair deficiency, complementation group 2 | TTCCAGATTCGTGAGAATGACTTTCTTACCTTCGATGCCATGCGCCACGC |
| ERCC3 | | NM_000122 | 2071 | Other | Seed | excision repair cross-complementing rodent repair deficiency, complementation group 3 | AGGAATATGCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCT |
| ERCC6 | | NM_000124 | 2074 | Other | Seed | excision repair cross-complementing rodent repair deficiency, complementation group 6 | GATGACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGA |
| ERF | | NM_006494 | 2077 | Trp cluster-Ets | Seed | Ets2 repressor factor | TATTACTATAACAAGCGCATTCTGCACAAGACCAAGGGGAAACGGTTCAC |
| ERG | | NM_004449 | 2078 | Trp cluster-Ets | Seed | v-ets avian erythroblastosis virus E26 oncogene related | AGCGTCCTCAGTTAGATCCTTATCAGATTCTTGGACCAACAAGTAGCCGC |
| ESR1 | | NM_000125 | 2099 | NHR | Seed | estrogen receptor 1 | TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTATTACATCACGGGGG |
| ESR2 | | NM_001437 | 2100 | NHR | Seed | estrogen receptor 2 | TTTGTCCAGCTACAAATCAGTGTACAATCGATAAAAACCGGCGCAAGAGC |
| ESRRA | | NM_004451 | 2101 | NHR | Seed | estrogen-related receptor alpha | TGGAGCGAGAGGAGTATGTTCTACTAAAGGCCTTGGCCCTTGCCAATTCA |
| ESRRB | | NM_004452 | 2103 | NHR | Seed | estrogen-related receptor beta | TCGCTTCCCTATGATGACAAGCTGGCATACGCGGAGGACTATATCATGGA |
| ESRRG | | NM_001438 | 2104 | NHR | Seed | estrogen-related receptor gamma | CTTGTCTATGCAGACGATTATATAATGGACGAAGACCAGTCCAAATTAGC |
| ESX1L | NT_011651:35 | NM_153448 | 80712 | Homeobox | Found | extraembryonic, spermatogenesis, homeobox 1-like | AAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGGGTC |
| ETR101 | | NM_004907 | 9592 | Other | Seed | immediate early protein | AAGAGGCACAGCGCATCATGACCCTGTCGGTGTGGAAGATGTATCACTCC |
| ETS1 | | NM_005238 | 2113 | Trp cluster-Ets | Seed | v-ets avian erythroblastosis virus E26 oncogene homolog 1 | CCAGGACTCTTTTGAAAGCATAGAGAGCTACGATAGTTGTGATCGCCTCA |
| ETS2 | | NM_005239 | 2114 | Trp cluster-Ets | Seed | v-ets avian erythroblastosis virus E26 oncogene homolog 2 | AGTCAGGACTTCCCAGGCAGCAACTTGAATTTGCTCACCAACAATTCTGG |
| ETV1 | | NM_004956 | 2115 | Trp cluster-Ets | Seed | ets variant gene 1 | CAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTATGTTTGA |
| ETV2 | | AF000671 | 2116 | Trp cluster-Ets | Seed | ets variant gene 2 | AGTTTGGCTCGATGCCCCAAAACTAACCACCGAGGTCCCATTCAGCTGTG |
| ETV3 | | L16464 | 2117 | Trp cluster-Ets | Seed | ets variant gene 3 | CTAGCTCCCAACTGCTTCTGGCCAGGAGTCCAGTAATGGTACTGATAGAA |
| ETV4 | | NM_001986 | 2118 | Trp cluster-Ets | Seed | ets variant gene 4 (E1A enhancer-binding protein, E1AF) | CCTGATTTCCATTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAGGAT |
| ETV5 | | NM_004454 | 2119 | Trp cluster-Ets | Seed | ets variant gene 5 (ets-related molecule) | GACAAGCTGAGCCGCTCTCTCCGCTATTACTATGAAAAGGGCATCATGCA |
| ETV6 | | NM_001987 | 2120 | Trp cluster-Ets | Seed | ets variant gene 6, TEL oncogene | GAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACTGTG |
| EVI1 | NT_034563:55 | NM_005241 | 2122 | ZnF-C2H2 | Found | ecotropic viral integration site 1 | TGAAGAAACCAGTGCCCTGGAGATGAGTTGCAAGACATCCCCAGTGAGGTAT |
| EVX1 | | NM_001989 | 2128 | Homeobox | Seed | eve, even-skipped homeo box homolog 1 (Drosophila) | CAACCCAGTAGCTCGGACACCGAGTCGGATTTCTATGAAGAAATCGAGGT |
| EVX2 | | M59983 | 2129 | Homeobox | Seed | eve, even-skipped homeo box homolog 2 (Drosophila) | TTGGGCTTGGTCGGAGAGAAGTAGACCAAGCCATTCAGAGGTCCGGAAGG |
| EYA1 | | NM_000503 | 2138 | Other | Seed | eyes absent (Drosophila) homolog 1 | CTCGCTCATTCACTCCCGGACAAACTGTGTGAATATTTTAGTAACAACTA |
| EYA2 | | NM_005204 | 2139 | Other | Seed | eyes absent (Drosophila) homolog 2 | CCAGTAGATCAATTTAAGCCATCTGATGTGGAAATTCAGGCTTGCTTCCG |
| EYA3 | | NM_001990 | 2140 | Other | Seed | eyes absent (Drosophila) homolog 3 | CTCATCCAGTCCAGAAAGAATTGTGTGAATGTTCCGATCACTACCACCCA |
| EYA4 | | NM_004100 | 2070 | Other | Seed | eyes absent (Drosophila) homolog 4 | AATTATTAGCACTAGGAGTAACTGCATAAATGTCTTGGTAACGACAACTC |
| EZF-2 | | NM_018337 | 55311 | ZnF-C2H2 | Seed | endothelial zinc finger protein 2 | ACAGGTGGAAAGGAGGACAGTGGGATGATTCCCTTAGGCACCGCCCCTGG |
| EZH1 | | NM_001991 | 2145 | Structural | Seed | enhancer of zeste homolog 1 | AAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCC |
| EZH2 | | NM_004456 | 2146 | Structural | Seed | enhancer of zeste homolog 2 | CTGCTATGCAAAAGTTATGATGGTTAACGGTGATCACAGGATAGGTATTT |
| FALZ | | NM_004459 | 2186 | ZnF-PHD | Seed | fetal Alzheimer antigen | ACTGTCGTTACTACAATCCAAGTGACTCCCCATTTTACCAGTGTGCAGAA |
| FBI1 | | NM_015898 | 51341 | ZnF-BTB/POZ | Seed | HIV-1 inducer of short transcripts binding protein; lymphoma related factor | TACGAGTGCAACATCTGCAAGGTCCGCTTCACCAGGCAGGACAAGCTGAA |
| FEM1A | | AL359589 | 55527 | Other | Seed | fem-1 homolog a (C.elegans) | TGGATAAGAACAAGATCCCTTACAAGGGCTTCATCCCGGAAGATCTGGAG |
| FEZL | | NM_018008 | 55079 | ZnF-C2H2 | Seed | likely ortholog of mouse and zebrafish forebrain embryonic zinc finger-like | TTCACCTGCGAGGTGTGCGGCAAGGTGTTTAACGCTCACTATAATCTCAC |
| FHL1 | | NM_001449 | 2273 | ZnF-Other | Seed | four and a half LIM domains 1 | AGATCAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCA |
| FHL2 | | NM_001450 | 2274 | ZnF-Other | Seed | four and a half LIM domains 2 | TTTGAGGAACGGCAGTGGCATAACGACTGCTTTAACTGTAAGAAGTGCTC |
| FHL5 | | NM_020482 | 9457 | Co-activator | Seed | four and a half LIM domains 5 | CCCAGTAGGAGTCATGTACACGGTATAAGACTTGGAGGAAATGCAGGGAC |
| FHX | | NM_018416 | 55810 | Forkhead | Seed | FOXJ2 forkhead factor | GGTGCCAATGAGGAGATCCCTGATGACTTCGACTGGGACTTGATCACTTA |
| FKHL18 | | AF042831 | 2307 | Forkhead | Seed | forkhead (Drosophila)-like 18 | CCTGGCGCCCCCACAACTGAGCCAACCAAGCCTCCCTACAGCTACATCGC |
| FLI1 | | NM_002017 | 2313 | Trp cluster-Ets | Seed | friend leukemia virus integration 1 | ATCCGACCGAGTCGTCCATGTACAAGTACCCTTCTGACATCTCCTACATG |
| FLJ10211 | | NM_018028 | 55095 | Other | Seed | hypothetical protein FLJ10211 | AGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTGCCAAA |
| FLJ10251 | | NM_018039 | 55693 | Jumonji | Seed | hypothetical protein FLJ10251 | CAACTGCGCAGAGGCCATCAATTTTGCCACTCCGCGATGGATTGATTATG |
| FLJ10298 | | NM_018050 | 54682 | Other | Seed | hypothetical protein FLJ10298 | TGGGTAGAATCCTCTCGGAATCACTCCGCAGGAAACGTTACTCAAGACTG |
| FLJ10300 | NT_028233:108 | NM_018051 | 55112 | ZnF-PHD | Found | hypothetical protein FLJ10300 | GACTCAAGGCTGCATTACTCTGTGACGCTGAGCGATGGCTTCTGGACGTTCC |
| FLJ10697 | | NM_018181 | 55205 | ZnF-C2H2 | Seed | hypothetical protein FLJ10697 | AGAAGCAACTTATGATGGACCATATCAAGTCTATGCATGGAACATTGAAA |
| FLJ10759 | | NM_018207 | 55223 | ZnF-Other | Seed | hypothetical protein FLJ10759 | TTCTACAATGCTGATGACATGTCCTGGCTCTACACCTTCCGCGAGAAGTT |
| FLJ10876 | NT_034412:27 | NM_018254 | 55758 | Trp Cluster-Myb | Found | hypothetical protein FLJ10876 | TCATTCTCAGCGTTCTAAGTGCCGTCCACCTAAGGGCATGTATTTAACCCAGGAA |
| FLJ10891 | | NM_018260 | 55762 | ZnF-C2H2 | Seed | hypothetical protein FLJ10891 | TCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCA |
| FLJ11078 | NT_011295:381 | NM_018316 | 55295 | ZnF-BTB/POZ | Found | hypothetical protein FLJ11078 | CGCCCTACACCGACAGCGACCGCTCGGTCAGCAGCAAGGTCTACCAGCTG |
| FLJ11191 | | NM_018355 | 55786 | ZnF-C2H2 | Seed | hypothetical protein FLJ11191 | GAAATCATGCATTAGGGAAAAACCTTACAGATATATTGAGTGCGACAAAG |
| FLJ11637 | NT_011268:279 | NM_024967 | 80032 | ZnF-C2H2 | Found | hypothetical protein FLJ11637 | GGCGGGCTTTGCTCTTCCAAAAATGTAAGAACGCAGATTGGACAGAAGCC |
| FLJ11780 | | AK021842 | | ZnF-C2H2 | Seed | hypothetical gene supported by AK021842 | GTCCCCACAGGGCTCTGTGCATGTCCATCATAGCAGTGGTAGGCTGTCAC |
| FLJ12517 | | NM_023007 | 65094 | Jumonji | Seed | hypothetical protein FLJ12517 | CTCAGAGACTACATCACCTACTGGAAAGAGTACATACAGGCGGGCTACTC |
| FLJ12525 | | NM_031206 | 81887 | Other | Seed | hypothetical protein FLJ12525 | GAAATTTAGGTATTTACCTAAGGCCATTAAGGCGTGGAATAACCCGTCCC |
| FLJ12581 | | NM_024865 | 79923 | Homeobox | Seed | hypothetical protein | TTGTCCCCAAAGCTTGCCTTGCTTTGAAGCATCCGACTGTAAAGAATCTT |
| FLJ12586 | NT_011104:316 | NM_024620 | 79673 | ZnF-C2H2 | Found | hypothetical protein FLJ12586 | ATGGTTTCCATGCACCTGACTCAAATGTTAGTGGTCTGGATTGTGACCCCG |
| FLJ12587 | NT_010343:96 | NM_022480 | 64410 | ZnF-BTB/POZ | Found | hypothetical protein FLJ12587 | TTTGACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACTGCCAAG |
| FLJ12606 | | NM_024804 | 79862 | ZnF-C2H2 | Seed | hypothetical protein FLJ12606 | TGTAAGAAATGCGGTAAAGCCTACACTCGTTCCAGTCACCTTACTCGCCA |
| FLJ12644 | | NM_023074 | 65251 | ZnF-C2H2 | Seed | hypothetical protein FLJ12644 | CCACAGCAAGTCACAGCTTAAGTCCTAGTGAACATGTGCAGGGGAAAAGC |
| FLJ12700 | NT_007914:819 | NM_024910 | 79970 | ZnF-C2H2 | Found | hypothetical protein FLJ12700 | |
| FLJ12895 | NT_011104:309 | NM_023926 | 65982 | ZnF-C2H2 | Found | hypothetical protein FLJ12895 | TCCTCAATTCTTAGCGATGGAGTGTACGAGAGGCACATGGACCCTCTGCTG |
| FLJ12985 | NT_035089:8 | NM_024924 | 79986 | ZnF-C2H2 | Found | hypothetical protein FLJ12985 | |
| FLJ13479 | | NM_024706 | 79759 | ZnF-C2H2 | Seed | hypothetical protein FLJ13479 | AGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCACAATGACGCTGCTG |
| FLJ13590 | | NM_024840 | 79898 | Other | Seed | hypothetical protein FLJ13590 | GTGACAAAGCATTCCGCTGGAAATCACAGCTCAATGCACATCAGAAAGCT |
| FLJ13659 | | NM_025189 | 80264 | ZnF-C2H2 | Seed | hypothetical protein FLJ13659 | TGGGGCTGACAGGAATCTTCTGGTGTACTCTTTTTATGAAAAGGGGCCAT |
| FLJ14129 | | NM_030895 | 79943 | ZnF-C2H2 | Seed | hypothetical protein FLJ14129 | TCACTTCTGAGAAAACTGGAGGACAGAGTGGCCTCGAGTCAGACGTCCCT |
| FLJ14260 | NT_011104:288 | NM_025027 | 80095 | ZnF-C2H2 | Found | hypothetical protein FLJ14260 | AGCAGGCATGTCCTCAACGCACTTGTCCAGAATGGGTGAGAAATCTTGAA |
| FLJ14297 | NT_006111:70 | NM_024903 | 79963 | ZnF-C2H2 | Found | hypothetical protein FLJ14297 | |
| FLJ14299 | NT_008251:102 | NM_025069 | 80139 | ZnF-C2H2 | Found | hypothetical protein FLJ14299 | GGCCTGGGCCTGCCGCCGGGCAAGCCCCCCAGCTCCAGCCCGCTCACCGG |
| FLJ14345 | NT_011148:5 | NM_024733 | 79788 | ZnF-C2H2 | Found | hypothetical protein FLJ14345 | CGTTCTACACGGTGAAGTTGGAGAGACTTGAAAGCTGTGACACTGCAGGCTTGTC |
| FLJ14486 | NT_011104:397 | NM_023792 | 84878 | ZnF-BTB/POZ | Found | hypothetical protein FLJ14486 | CAAACATTCCCGTGGTTTGGTATGGATATCGGTGGAACCCTGGTTAAGCTGGTT |
| FLJ14549 | | NM_032805 | 84891 | ZnF-C2H2 | Seed | hypothetical protein FLJ14549 | CTGGCGAAGATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGGTCAAA |
| FLJ14768 | NT_011150:23 | NM_032836 | 84922 | ZnF-C2H2 | Found | hypothetical protein FLJ14768 | GAGCCCTCGGAAGACACCCTGTACCAGTGCGACTGCGGGACCTTCTTTGC |
| FLJ14779 | NT_011192:53 | NM_032838 | 84924 | ZnF-C2H2 | Found | hypothetical protein FLJ14779 | TCTGCCCACTTTGAGTCACCATCCATCCTTCACATTACAGCAAATCATTAACAGT |
| FLJ20043 | | NM_017637 | 54796 | ZnF-C2H2 | Seed | hypothetical protein FLJ20043 | CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGC |
| FLJ20079 | NT_011176:136 | NM_017656 | 54811 | ZnF-C2H2 | Found | hypothetical protein FLJ20079 | |
| FLJ20244 | | NM_017722 | 55621 | ZnF-C3H | Seed | hypothetical protein FLJ20244 | AGTGCCAACGAGGTCTTTTATAACCCGGTGCAGGAATTCAATCGGGACCT |
| FLJ20321 | | NM_017766 | 54897 | ZnF-C2H2 | Seed | hypothetical protein | AAGCACGCAAACTTCCACTTCCGGACAGAGGGAGAAGCAGCAAAAGGAAA |
| FLJ20344 | NT_011568:72 | NM_017776 | 55634 | ZnF-C2H2 | Found | hypothetical protein FLJ20344 | ACCCCGGTACGGACCTGTGCAGAAGTCTGGCAAGTTGATGAGCAGATAGAT |
| FLJ20531 | | NM_017865 | 55657 | ZnF-C2H2 | Seed | hypothetical protein FLJ20531 | AGACGTATCCACACTGGAGAAAAACCCCTGCAGTGTGAGATATGCGGGTT |
| FLJ20557 | | BC000130 | 55659 | ZnF-C2H2 | Seed | hypothetical protein FLJ20557 | ACATGTGTGTCCCATTCCTGACCGACATTTTGCACCTGACCGATTTGCCT |
| FLJ20573 | | AK000580 | 57232 | ZnF-C2H2 | Seed | hypothetical zinc finger protein FLJ20573 | GAGAAACCCTCCAGATGCAGTGACTGTGGGAAGGCATTCTGCCAGCATGT |
| FLJ20582 | NT_010344:26 | AK000589 | 54989 | ZnF-C2H2 | Found | hypothetical protein FLJ20582 | |
| FLJ20626 | NT_011104:387 | NM_017908 | 55663 | ZnF-C2H2 | Found | hypothetical protein FLJ20626 | CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCACCACCGGACACACAC |
| FLJ20729 | | NM_017953 | 54680 | Other | Seed | hypothetical protein FLJ20729 | AAAATTTAGTAAGATATTATGAACTAGATCCTTATAAAAGTCTCCTAGAC |
| FLJ21603 | | NM_024762 | 79818 | Other | Seed | hypothetical protein FLJ21603 | TTTAGCACCAAAGATATACTCAGTCAGCACGAGAGACTGCTCCCTACAGA |
| FLJ21628 | NT_006802:2 | NM_030613 | 80108 | ZnF-C2H2 | Found | hypothetical protein FLJ21628 | GGTGTGTGGAAAACATTTCACTGGACGATCATCCCTTACCGTGCATCAGGT |
| FLJ21941 | NT_011109:1285 | NM_025040 | 80110 | ZnF-C2H2 | Found | FLJ21941 protein | |
| FLJ22059 | NT_011139:287 | NM_022752 | 64763 | ZnF-C2H2 | Found | hypothetical protein FLJ22059 | GACCAGCACCTTGGAGACCATAGCAGCGAGTCACACTTCCTGTGTGTAGACTGT |
| FLJ22301 | | NM_024836 | 79894 | Other | Seed | hypothetical protein FLJ22301 | CAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAAGCCACACAAAT |
| FLJ22332 | | NM_024724 | 79779 | Other | Seed | hypothetical protein FLJ22332 | CAATGACCAAAAGGATAACATACAAACCGGTGTGGAAAATGTTGTCCTTT |
| FLJ22487 | | AK026140 | | Other | Seed | hypothetical protein | ATCCAGGACTAACCAGCGGGTGAGCTTCAAGGAACAAAGGGCTTCCGCTG |
| FLJ23233 | NT_011104:168 | NM_024691 | 79744 | ZnF-C2H2 | Found | hypothetical protein FLJ23233 | GCTCAGGTTCCTGTGGCTGCAGACTTGCTTACAGACCATGAGGAGGGCTAT |
| FLJ23309 | | NM_024896 | 79956 | Other | Seed | hypothetical protein FLJ23309 | TCTCACATAACCCCTCACATTCCTGCGATCAATGATAGTATCCGAGCTCA |
| FLJ23436 | NT_024802:22 | NM_024671 | 79724 | ZnF-C2H2 | Found | hypothetical protein FLJ23436 | GCGGAGATGCTTCTGAACCCCGACGAAAAGAGTCCTTTGAATATCTCCGTAGGA |
| FLJ23506 | NT_011104:233 | NM_024833 | 79891 | ZnF-C2H2 | Found | hypothetical protein FLJ23506 | TAGTAGGAGTGTCAGAGGTCAGGACTCTCATGGCAGAGCTGGAGTCTCACCCATG |
| FLJ23614 | NT_011786:397 | NM_152695 | 203523 | ZnF-C2H2 | Found | hypothetical protein FLJ23614 | AAGCTTCAGACAGAGAGCCGGCCTTATTATGCACCAGGTCACTCACTTTAGAGGA |
| FLJ23765 | NT_011192:175 | NM_152655 | 199704 | ZnF-C2H2 | Found | hypothetical protein FLJ23765 | |
| FLJ25169 | NT_008176:75 | NM_152568 | 157848 | Homeobox | Found | hypothetical protein FLJ25169 | GCGAGAGCTGGGGGGAAGAAGCAGACACTCCTGCATGTCTTTCTGCTTCT |
| FLJ30663 | NT_011196:508 | AK055225 | 148103 | ZnF-AN1 | Found | hypothetical protein FLJ30663 | GCACAGAGATCCTCAAGAGATTCCAGGTTGGGGCAAGCTAGAGATGAGGAAAAGC |
| FLJ30726 | NT_033299:98 | NM_153018 | 124961 | ZnF-C2H2 | Found | hypothetical protein FLJ30726 | CACATCAGGGAGATACAACAGAGGGAGTTAGTGCATTTGCTACCTCTGGCCAAAA |
| FLJ30921 | NT_011233:69 | NM_152360 | 126231 | ZnF-C2H2 | Found | hypothetical protein FLJ30921 | GTTATCAGCTGACTGTGCATCAGAGATTTCATACTGGTGAGAAAACCTATGA |
| FLJ30927 | NT_011104:57 | NM_144690 | 147948 | ZnF-C2H2 | Found | hypothetical protein FLJ30927 | CAGACAACAGGGAAATCCAGACAGACATTTCCATCAGATGATCATCAGACATGAA |
| FLJ30932 | NT_011176:40 | NM_144693 | 148156 | ZnF-C2H2 | Found | hypothetical protein FLJ30932 | ACCAAGCACCTGTCCAGATTTGGAGACTCTACTTAAAGCCAAATGGTTAACTCCT |
| FLJ31030 | NT_011104:61 | NM_152478 | 147949 | ZnF-C2H2 | Found | hypothetical protein FLJ31030 | TCCCAGTTTGAGAGAAGACTGTCAAAGTGAGGACTGGTATAAGAACCAGCTGGGA |
| FLJ31100 | NT_011104:156 | NM_173631 | 284306 | ZnF-C2H2 | Found | hypothetical protein FLJ31100 | |
| FLJ31295 | NT_009526:16 | NM_152320 | 121274 | ZnF-C2H2 | Found | hypothetical protein FLJ31295 | AGTTTCTCAAACCTGCTGTGTAGCACAGAGATGGATTCCCTGTTAAGACCCCACA |
| FLJ31413 | NT_007914:812 | NM_152557 | 155061 | ZnF-C2H2 | Found | hypothetical protein FLJ31413 | AAGGCCATTCAACGAACCCTGTAAATACCCTGGCCGGACCAAAGGCTTTG |
| FLJ31751 | NT_024802:5 | NM_152652 | 197407 | ZnF-C2H2 | Found | hypothetical protein FLJ31751 | CAGGACAAGCCATATATCTGCACTGATTGCGGCAAGAGGTTTGTGCTCAG |
| FLJ31875 | NT_010542:14 | NM_182531 | 197320 | ZnF-AN1 | Found | hypothetical protein FLJ31875 | |
| FLJ31986 | NT_011176:116 | NM_152476 | 147741 | ZnF-C2H2 | Found | hypothetical protein FLJ31986 | ACGCATGTGGAAATTCCTTTCGAAATTCCATGTGCTTTCATGATCGCTTAAAAAC |
| FLJ32053 | NT_011233:12 | NM_152484 | 148266 | ZnF-C2H2 | Found | FLJ32053 protein | GACACTGGCAAGGAGAAATATGGGGAGTTGATGAGCATCAGAAAAACCAGGA |
| FLJ32130 | NT_024802:32b | NM_152458 | 146540 | ZnF-C2H2 | Found | hypothetical protein FLJ32130 | TTCGGCCACCTGGGCGCGCTGGGATTTTCAGTTCCCAAACCCGCTTTTAT |
| FLJ32191 | NT_011192:164 | NM_144689 | 147923 | ZnF-C2H2 | Found | hypothetical protein FLJ32191 | TCTTGAAGAGTCCAATTCCAGGGATTATTTGGAAGCCAAAGGCAAGATGGAGAA |
| FLJ32932 | NT_011104:159 | NM_152909 | 147694 | ZnF-C2H2 | Found | hypothetical protein FLJ32932 | |
| FLJ33071 | NT_010552:617 | NM_152457 | 146434 | ZnF-C2H2 | Found | hypothetical protein FLJ33071 | AGTCCTTATATCCTGCCCTTTCCGAGAAGAGCCACGACGAGGACTCTGAAC |
| FLJ34231 | | NM_152283 | 92379 | ZnF-C2H2 | Seed | hypothetical protein FLJ34231 | TAGTGGCACATCCCAGAAGAGAACCTATGAGGGAGGGAATGCCCTGGATG |
| FLJ34817 | NT_011268:270 | NM_152303 | 115196 | ZnF-C2H2 | Found | hypothetical protein FLJ34817 | AATGGGCAGTCATTGAACCACGGTATGGCCCTGACTATCCACAACAAAAT |
| FLJ34917 | NT_011104:184 | NM_153263 | 256051 | ZnF-C2H2 | Found | hypothetical protein FLJ34917 | CAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTC |
| FLJ35107 | NT_005927:1136 | NM_182629 | 348825 | Homeobox | Found | hypothetical protein FLJ35107 | GACACACGACAAGAGCTGGCGGAGATGCTCAATCTCAGGGAGTACCAAGT |
| FLJ35863 | NT_011192:191 | NM_152604 | 163087 | ZnF-C2H2 | Found | hypothetical protein FLJ35863 | TGCCAGAGGGAGATAATGGGACTTACAAAGCATGGCCTTGAGTACTCCAGTTTTG |
| FLJ35867 | NT_030828:610 | NM_152455 | 146050 | ZnF-C2H2 | Found | hypothetical protein FLJ35867 | CCAAACTCCCTTCTCATGCATCAGGTATCCCACCAGGTGGAAAATCCATA |
| FLJ35954 | NT_006431:489 | NM_152622 | 166968 | Other | Found | hypothetical protein FLJ35954 | GGATCGTTTAGTAGATGAAACAGAAGCTTTGGGTGGGACGGTAAATGCTTCAGCC |
| FLJ36040 | NT_011109:1346 | NM_173530 | 162963 | ZnF-C2H2 | Found | hypothetical protein FLJ36040 | TGATCTTATTGATTTCCCATTACTCCCACAAGAAGAGAAAGCATACATTAGAGGA |
| FLJ36155 | | NM_147193 | 148979 | ZnF-C2H2 | Seed | likely ortholog of mouse Gli-similar 1 Kruppel-like zinc finger (Glis1) | ATGGAGCCTTTGACCACTGCCTGGGCCACATCCCCTCCATCTACACAGAC |
| FLJ36666 | NT_011268:62 | NM_152482 | 148223 | bZIP | Found | hypothetical protein FLJ36666 | GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCG |
| FLJ37970 | NT_033241:357 | NM_032251 | 283234 | bZIP | Found | hypothetical protein FLJ37970 | GTGAGTGTGGGCCTGTGGTAGGCACTAGGGGGTGCCCCCGCCACCTGGCTA |
| FLJ39963 | NT_033968:320 | NM_182633 | 349075 | ZnF-C2H2 | Found | hypothetical protein FLJ39963 | AATGGAGAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTG |
| FLJ40160 | NT_032971:102 | NM_173484 | 128209 | ZnF-C2H2 | Found | hypothetical protein FLJ40160 | |
| FLJ90396 | NT_011176:577 | NM_153358 | 163049 | ZnF-C2H2 | Found | hypothetical protein FLJ90396 | AGTCAATGTGCAGAAAACTTCAGTCCCAATCTCAGTGTGACGAAGAAGACTGCC |
| FMR2 | | NM_002025 | 2334 | AF-4 | Seed | fragile X mental retardation 2 | CACTAGCAATGTGTTACGGGGCTATGAACACTGGGATATGGCCGACAAAC |
| FOS | | NM_005252 | 2353 | bZIP | Seed | v-fos FBJ murine osteosarcoma viral oncogene homolog | AAGGAAAAACTAGAGTTCATCCTGGCAGCTCACCGACCTGCCTGCAAGAT |
| FOSB | | NM_006732 | 2354 | bZIP | Seed | FBJ murine osteosarcoma viral oncogene homolog B | AACCTGACGGCTTCTCTCTTTACACACAGTGAAGTTCAAGTCCTCGGCGA |
| FOSL1 | | NM_005438 | 8061 | bZIP | Seed | FOS-like antigen 1 | CGGAGACTGACAAACTGGAAGATGAGAAATCTGGGCTGCAGCGAGAGATG |
| FOSL2 | | NM_005253 | 2355 | bZIP | Seed | FOS-like antigen 2 | ATGTACCAGGATTATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGCAG |
| FOXA1 | | NM_004496 | 3169 | Forkhead | Seed | forkhead box A1 | AGCAGCAGCATAAGCTGGACTTCAAGGCATACGAACAGGCACTGCAATAC |
| FOXA2 | | NM_021784 | 3170 | Forkhead | Seed | forkhead box A2 | ATGCTGGGAGCGGTGAAGATGGAAGGGCACGAGCCGTCCGACTGGAGCAG |
| FOXA3 | | NM_004497 | 3171 | Forkhead | Seed | forkhead box A3 | TGGAGTCTACTACCAGGGCCTCTATTCCCGCTCTTTGCTTAATGCATCCT |
| FOXB1 | | NM_012182 | 27023 | Forkhead | Seed | forkhead box B1 | ATGCCTCGGCCCGGCCGCAACACGTACAGCGACCAGAAGCCGCCCTACTC |
| FOXC1 | | NM_001453 | 2296 | Forkhead | Seed | forkhead box C1 | AGGATCGGCTTGAACAACTCTCCAGTGAACGGGAATAGTAGCTGTCAAAT |
| FOXC2 | | NM_005251 | 2303 | Forkhead | Seed | forkhead box C2 (MFH-1, mesenchyme forkhead 1) | ATGCAGGCGCGCTACTCCGTGTCCGACCCCAACGCCCTGGGAGTGGTGCC |
| FOXD1 | | NM_004472 | 2297 | Forkhead | Seed | forkhead box D1 | CAAGGGACTGCCCTGTCCAGTGTCGAGAACTTTACTGCTAGGATTTCCAA |
| FOXD2 | | NM_004474 | 2306 | Forkhead | Seed | forkhead box D2 | GTCTACGCAGGCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATAT |
| FOXD3 | | NM_012183 | 27022 | Forkhead | Seed | forkhead box D3 | AGAAGAAGCTGACCCTGAGCGGCATCTGCGAGTTCATCAGCAACCGCTTC |
| FOXD4 | | AY344640 | 2298 | Forkhead | Seed | forkhead box D4 | |
| FOXE1 | | NM_004473 | 2304 | Forkhead | Seed | forkhead box E1 (thyroid transcription factor 2) | ACAAGTTCATCACCGAGCGCTTCCCCTTCTACCGCGACAACCCCAAAAAG |
| FOXE2 | | NM_012185 | 27021 | Forkhead | Seed | forkhead box E2 | |
| FOXE3 | | NM_012186 | 2301 | Forkhead | Seed | forkhead box E3 | TCACGCTGGCCGCCATCTACCGCTTCATCACCGAACGCTTTGCCTTCTAC |
| FOXF1 | | NM_001451 | 2294 | Forkhead | Seed | forkhead box F1 | TCGCCCAGCATGTGTGACCGAAAGGAGTTTGTCTTCTCTTTCAACGCCAT |
| FOXF2 | | NM_001452 | 2295 | Forkhead | Seed | forkhead box F2 | CTAGCGGGTCGTATTATCACCATCACCACCAGAGCGTCTGTCAGGATATT |
| FOXG1B | | NM_005249 | 2290 | Forkhead | Seed | forkhead box G1B | TATTTCACACATCAAAATCAGGGGTCTTCTTCCAACCCTTTAATACATTA |
| FOXH1 | | NM_003923 | 8928 | Forkhead | Seed | forkhead box H1 | AAGACTACGAGGGCTGGAAAGACTCCATTCGCCACAACCTTTCCTCCAAC |
| FOXI1 | | NM_012188 | 2299 | Forkhead | Seed | forkhead box I1 | TACGGAGGATCTGTGCTCAGCCAATTCAGCCCTCACTTCTACAACAGTGT |
| FOXJ1 | | NM_001454 | 2302 | Forkhead | Seed | forkhead box J1 | AAGATCACCCTGTCGGCCATCTACAAGTGGATCACGGACAACTTCTGCTA |
| FOXL1 | | NM_005250 | 2300 | Forkhead | Seed | forkhead box L1 | CTCTCTTATTTCCCCCTGCAGGTTCCCGACACGGTACTCCACTTCCAGTA |
| FOXL2 | | NM_023067 | 668 | Forkhead | Seed | forkhead box L2 | AGAAGAATAAGAAGGGCTGGCAAAATAGCATCCGCCACAACCTCAGCCTC |
| FOXM1 | | NM_021953 | 2305 | Forkhead | Seed | forkhead box M1 | CCTTGAATCACCGCAAAGGCTCCTCAGTTCAGAACCCTTAGACCTCATCT |
| FOXN4 | NT_009770:26 | AF425596 | 121643 | Forkhead | Found | forkhead/winged helix transcription factor FOXN4 | ATGAACACTGAGGTGGATGCCCTCGACCCGAGCATCATGGACTTCGCTCT |
| FOXO1A | | NM_002015 | 2308 | Forkhead | Seed | forkhead box O1A (rhabdomyosarcoma) | TTCTGGGCCAGAACGTCATGATGGGCCCTAATTCGGTCATGTCAACCTAT |
| FOXO3A | | NM_001455 | 2309 | Forkhead | Seed | forkhead box O3A | TGTTGTTGGTTTGAACGTGGGGAACTTCACTGGTGCTAAGCAGGCCTCAT |
| FOXP1 | | AF275309 | 27086 | Forkhead | Seed | forkhead box P1 | GAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGC |
| FOXP2 | | NM_014491 | 93986 | Forkhead | Seed | forkhead box P2 | GCTCACCTCAGCCGCACATACATTCAATCCACGTCAAGGAAGAGCCAGTG |
| FOXP3 | | NM_014009 | 50943 | Forkhead | Seed | forkhead box P3 | CAACATGGACTACTTCAAGTTCCACAACATGCGACCCCCTTTCACCTACG |
| FOXP4 | NT_007592:3277 | NM_138457 | 116113 | Forkhead | Found | forkhead box P4 | TTTATCAAACACCTCAACACAGAGCACGCCCTGGATGACCGGAGTACAGC |
| FOXQ1 | | NM_033260 | 94234 | Forkhead | Seed | forkhead box Q1 | CGGGCCCGCGCGCGGACTTTGCACTTTGAATCCAGAGGAAGATGAATTTT |
| FREQ | NT_029366:864 | NM_014286 | 23413 | Other | Found | frequenin homolog (Drosophila) | TGACCAGGAAGACCTACTTTACCGAGAAGGAGGTCCAGCAGTGGTACAAAGGCT |
| FUBP1 | | NM_003902 | 8880 | Other | Seed | far upstream element-binding protein | CAGCCTGGGCTGAGCATTATAGACAACAAGCAGCCTATTATGCCCAGACA |
| FUBP3 | NT_008338:25 | BC001325 | 8939 | Other | Found | far upstream element (FUSE) binding protein 3 | AGATAACATACACGGTGCCAGCCGATAAGTGTGGCCTCGTCATAGGCAAAGG |
| GABPA | | NM_002040 | 2551 | Trp cluster-Ets | Seed | GA-binding protein transcription factor, alpha subunit (60kD) | AAGCATTGTAGAACAAACCTACGCGCCAGCTGAATGTGTAAGCCAGGCCA |
| GABPB1 | | NM_005254 | 2552 | Co-activator | Seed | GA-binding protein transcription factor, beta subunit 1 (53kD) | TCAGAAAATTCATCCAAGGCAACAGATGAAACGGGTGTATCTGCTGTTCA |
| GABPB2 | | NM_016655 | 2553 | Trp cluster-Ets | Seed | GA-binding protein transcription factor, beta subunit 2 (47kD) | GCAGAAATAGAAGTAAGGAGTCTTTTACCCGGTGTGCTTTGCCGCAGTCA |
| GAS41 | | NM_006530 | 8089 | Structural | Seed | glioma-amplified sequence-41 | AAGGGTGTTACTATCGTTAAACCAATAGTTTACGGTAATGTTGCTCGGTA |
| GASC1 | | AB018323 | 23081 | ZnF-PHD | Seed | gene amplified in squamous cell carcinoma 1 | TTTTGTGGCACCTATCTATGGTGCAGATATTAATGGGAGCATATATGATG |
| GATA1 | | NM_002049 | 2623 | ZnF-GATA | Seed | GATA-binding protein 1 (globin transcription factor 1) | ACCATGCGGAAGGATGGTATTCAGACTCGAAACCGCAAGGCATCTGGAAA |
| GATA2 | | NM_002050 | 2624 | ZnF-GATA | Seed | GATA-binding protein 2 | AAGAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAACCACCACCTTAT |
| GATA3 | | NM_002051 | 2625 | ZnF-GATA | Seed | GATA-binding protein 3 | GCATCCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAA |
| GATA4 | | NM_002052 | 2626 | ZnF-GATA | Seed | GATA-binding protein 4 | TCTTGCAATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCAAGA |
| GATA5 | | NM_080473 | 140628 | ZnF-GATA | Seed | GATA-binding protein 5 | CACCACCACCACCAACTTGAATTCCGTCATCAATGCTCACCGTCAATATG |
| GATA6 | | NM_005257 | 2627 | ZnF-GATA | Seed | GATA-binding protein 6 | AATCCCGAGAACAGCGAGCTCAAGTATTCGGGTCAAGATGGGCTCTACAT |
| GBX1 | | L11239 | 2636 | Homeobox | Seed | gastrulation brain homeobox 1 | GAGCCCGTAAGAAACCCCAAGATTGTTGTCCCCATACCTGTGCATGTCAA |
| GBX2 | | NM_001485 | 2637 | Homeobox | Seed | gastrulation brain homeobox 2 | CAGCTGCTGGAGCTAGAGAAGGAGTTCCACTGCAAAAAGTACCTCTCCTT |
| GCMA | | NM_003643 | 8521 | GCM | Seed | glial cells missing (Drosophila) homolog a | TGCCTCCGGAGTCTACTCTGATCATGGCGATCTACAAGCGTGGAGTAAAA |
| GCMB | | NM_004752 | 9247 | GCM | Seed | glial cells missing (Drosophila) homolog b | AGCCCATATCCCACCCTTTATAAGGATTCCACCAGTATCCCTAATGACAC |
| GCN5L1 | | NM_001487 | 2647 | Other | Seed | GCN5 (general control of amino-acid synthesis, yeast, homolog)-like 1 | ATCGAGCTGGACATGCGCACCATTGCCACTGCACTGGAATATGTCTACAA |
| GCN5L2 | | NM_021078 | 2648 | Bromodomain | Seed | GCN5 (general control of amino-acid synthesis, yeast, homolog)-like 2 | ATCAAGCACAACATTCTCTACTTCCTCACCTACGCCGACGAGTACGCCAT |
| GFI1 | | NM_005263 | 2672 | ZnF-C2H2 | Seed | growth factor independent 1 | TACCCCTGTCAGTACTGTGGCAAGAGGTTCCACCAGAAGTCAGACATGAA |
| GFI1B | | NM_004188 | 8328 | ZnF-C2H2 | Seed | growth factor independent 1B (potential regulator of CDKN1A, translocated in CML) | CAAGCGTTTCCACCAGAAGTCCGACATGAAGAAGCACACCTACATCCACA |
| GIOT-1 | | AB021641 | 92283 | ZnF-C2H2 | Seed | gonadotropin inducible transcription repressor 1 | CTTATCAATGCGGGAAGGCGTTTAATCATAGATTACAACTTAACTTACAT |
| GIOT-2 | | NM_016264 | 51710 | ZnF-C2H2 | Seed | gonadotropin inducible transcription repressor-2 | AGGACTCACAGTGAAGAAAAATCTTATGAGTGTCAAATTTGTGGGAAAGC |
| GLI | | NM_005269 | 2735 | ZnF-C2H2 | Seed | glioma-associated oncogene homolog (zinc finger protein) | ATGAGTGTCTTACTGAGATCCCTACCTGGGGAAACAGAATTCCTCAACTC |
| GLI2 | | NM_005270 | 2736 | ZnF-C2H2 | Seed | GLI-Kruppel family member GLI2 | CAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAACATGGCTGT |
| GLI3 | | NM_000168 | 2737 | ZnF-C2H2 | Seed | GLI-Kruppel family member GLI3 (Greig cephalopolysyndactyly syndrome) | CTATCGGGGACATGAGTTCTTTGCTGACCTCCCTAGCGGAAGAAAGCAAA |
| GLI4 | NT_023684:15 | NM_138465 | 2738 | ZnF-C2H2 | Found | GLI-Kruppel family member GLI4 | GGACATTCAGGAGTCCCCTTCTGTCCCGTCCCCTGTCAGTCTCTCATCAC |
| GLIS2 | | NM_032575 | 84662 | ZnF-C2H2 | Seed | Kruppel-like zinc finger protein GLIS2 | TTTAAGCACACGCGCACCCACTATGTGGACAAGCCCTACTACTGCAAGAT |
| GREB1 | NT_005334:553 | NM_014668 | 9687 | Co-repressor | Found | GREB1 protein | ATAACCTCTATTCTCAAAGTGACCCGTCGGTGGGATTGGTGGACCGATTGC |
| GRLF1 | | NM_004491 | 2909 | ZnF-Other | Seed | glucocorticoid receptor DNA binding factor 1 | AAAGAACATAATCGAGGCTACTCATATGTACGATAATGCTGCCGAGGCCT |
| GSC | | ENST00000238558 | 2927 | Homeobox | Seed | goosecoid | CGCACAGCGCGGCGGCTCCCGTCGTCTTCCCGGCCCTGCACGGGGACTCG |
| GSCL | | NM_005315 | 2928 | Homeobox | Seed | goosecoid-like | GGGTGCCGGGCGGCCCTGCCCCTTCTCCATCGAGCACATCCTCTCCAGCC |
| GSH1 | | XM_046853 | 92719 | Homeobox | Seed | genomic screened homeo box 1 homolog (mouse) | GGGGCCCAGCTTCCAATAGTGTCAGAAGCAACTTGTGGCTTTGCCTTGGT |
| GSH2 | | NM_133267 | 170825 | Homeobox | Seed | genomic screened homeo box 2 homolog (mouse) | CTCTTCCAACATGTACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTT |
| GTF2A1 | | NM_015859 | 2957 | Other | Seed | general transcription factor IIA, 1 (37kD and 19kD subunits) | ACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGA |
| GTF2A2 | | NM_004492 | 2958 | Other | Seed | general transcription factor IIA, 2 (12kD subunit) | GGGCTCTCTAAATACGTACAGATTCTGCGATAATGTGTGGACTTTTGTAC |
| GTF2B | | NM_001514 | 2959 | Other | Seed | general transcription factor IIB | GCTGATGTTACAATCAGACAGTCCTATAGACTGATCTATCCTCGAGCCCC |
| GTF2E1 | | NM_005513 | 2960 | Other | Seed | general transcription factor IIE, polypeptide 1 (alpha subunit, 56kD) | GGAAGCATATATAGCAATGGGACAACGCATGTTTGAGGACCTCTTTGAGT |
| GTF2E2 | | NM_002095 | 2961 | Other | Seed | general transcription factor IIE, polypeptide 2 (beta subunit, 34kD) | TCACAGAAAAAGCGACGCTTTAAGACTCATAACGAACACTTGGCTGGAGT |
| GTF2F1 | | NM_002096 | 2962 | Other | Seed | general transcription factor IIF, polypeptide 1 (74kD subunit) | AGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATG |
| GTF2F2 | | NM_004128 | 2963 | Other | Seed | general transcription factor IIF, polypeptide 2 (30kD subunit) | AAGACGGAAAGCGAGCTCGAGCTGATAAACAACATGTTTTAGACATGCTA |
| GTF2H1 | | NM_005316 | 2965 | Other | Seed | general transcription factor IIH, polypeptide 1 (62kD subunit) | AAAGATTCGGAGACAGTATTTAAGCACAAATTTGGTAAGTCACATAGAAG |
| GTF2H2 | | NM_001515 | 2966 | Other | Seed | general transcription factor IIH, polypeptide 2 (44kD subunit) | GTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCT |
| GTF2H3 | | NM_001516 | 2967 | Other | Seed | general transcription factor IIH, polypeptide 3 (34kD subunit) | AAGAGATTAAAGATCTAATGACCAAAAGTGACATAAAGGGTCAACATACA |
| GTF2H4 | | NM_001517 | 2968 | Other | Seed | general transcription factor IIH, polypeptide 4 (52kD subunit) | GCCAGGTTTCATTGTCGTGGAAACCAATTACCGACTGTATGCCTACACGG |
| GTF2I | | NM_001518 | 2969 | Other | Seed | general transcription factor II, i | AAAGAGACTGATGGAAGCTCTCAGATCAAGCAAGAACCAGACCCCACGTG |
| GTF2IRD1 | NT_007758:1220 | NM_005685 | 9569 | bHLH | Found | GTF2I repeat domain containing 1 | CTGGTCCCTTATAAACTAATCCGGGACAGCCCAGACGCCGTGGAGGTCACGG |
| GTF2IRD2 | NT_007758:1320 | NM_173537 | 84163 | bHLH | Found | transcription factor GTF2IRD2 | |
| GTF3A | | NM_002097 | 2971 | Other | Seed | general transcription factor IIIA | TGAAGCTCAAAGTCAAAAAATCTCGTGAAAAACGGGAGTTTGGCCTCTCA |
| GTF3C1 | | NM_001520 | 2975 | Other | Seed | general transcription factor IIIC, polypeptide 1 (alpha subunit, 220kD ) | GTCCTACCAGCTATCCCAGACCTACTACAGGATTTTTACGTGGCGATTTC |
| GTF3C2 | | NM_001521 | 2976 | Other | Seed | general transcription factor IIIC, polypeptide 2 (beta subunit, 110kD) | CAGCTGGAGGCTATTCATAAGGTACGTTTCAGCCCAAACCTGGACTCCTA |
| GTF3C3 | | NM_012086 | 9330 | Other | Seed | general transcription factor IIIC, polypeptide 3 (102kD) | AGGGTATAGAACTTGACCAGTTAGACTTACGAAGAGATATTGCCTACAAC |
| GTF3C4 | | NM_012204 | 9329 | Other | Seed | general transcription factor IIIC, polypeptide 4 (90kD) | AGATGCACTTGACCAGGGAACACATGAAGCCAGTCTTAGGAGAAGTGTAT |
| GTF3C5 | | NM_012087 | 9328 | Other | Seed | general transcription factor IIIC, polypeptide 5 (63kD) | GCTCAAGGTCTTGCTTCCCTTCATAGCCTATTACATGATAACAGGCCCCT |
| HAND1 | | NM_004821 | 9421 | bHLH | Seed | heart and neural crest derivatives expressed 1 | ACGAAGGTTTTCCTCCTGCCCTGGGCCCAGTCGAGAAGAGGATTAAAGGA |
| HAND2 | | NM_021973 | 9464 | bHLH | Seed | basic helix-loop-helix transcription factor HAND2 | GAGCTGAACGAAATCTTGAAAAGCACAGTGAGCAGCAACGACAAGAAAAC |
| HATH6 | NT_015805:94 | NM_032827 | 84913 | bHLH | Found | basic helix-loop-helix transcription factor 6 | CTACTCGTCAATTTCACACGTAATTTACAATAACCACCAGGATTCCTCCG |
| HBOA | | NM_007067 | 11143 | Co-activator | Seed | histone acetyltransferase | CCAGAACGTCCACTCTCAGATCTGGGGCTTATAAGCTATCGCAGTTACTG |
| HCF2 | | NM_013320 | 29915 | Other | Seed | host cell factor 2 | TGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTT |
| HCNGP | | NM_013260 | 29115 | Other | Seed | transcriptional regulator protein | AACAAAAATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACG |
| HDAC1 | | NM_004964 | 3065 | Co-repressor | Seed | histone deacetylase 1 | TTATGCTGTTAACTACCCGCTCCGAGACGGGATTGATGACGAGTCCTATG |
| HDAC2 | | NM_001527 | 3066 | Co-repressor | Seed | histone deacetylase 2 | CTGTCAATTTTCCAATGTGTGATGGTATAGATGATGAGTCATATGGGCAG |
| HDAC4 | | NM_006037 | 9759 | Co-repressor | Seed | histone deacetylase 4 | AAAAGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCATGGAG |
| HDAC8 | NT_011594:18 | NM_018486 | 55869 | Structural | Found | histone deacetylase 8 | CTGGGAATATTACGATTGCGACGGAAATTTGAGCGTATTCTCTACGTGGATTTGG |
| HES2 | | NM_019089 | 54626 | bHLH | Seed | hairy and enhancer of split 2 (Drosophila) | CTTCCCCTCCATGCTCAGAACTGCTTCCTACTCTACATCCAGGCTCCTGA |
| HES5 | | BQ924744 | 256482 | bHLH | Seed | hairy and enhancer of split 5 (Drosophila) | CCGACATCCTGGAGATGGCTGTCAGCTACCTGAAGCACAGCAAAGGTGAG |
| HES6 | | NM_018645 | 55502 | bHLH | Seed | hairy and enhancer of split 6 (Drosophila) | ATCGACGCTACCGTCGCTGCCGAGCTCCTGAACCATCTGCTCGAGTCCAT |
| HES7 | | NM_032580 | 84667 | bHLH | Seed | hairy and enhancer of split 7 (Drosophila) | AACCCGAAGCTGGAGAAAGCGGAGATATTGGAGTTCGCCGTGGGCTACTT |
| HESX1 | | NM_003865 | 8820 | Homeobox | Seed | homeobox (expressed in ES cells) 1 | GTCTTTAGAGTAAACTGCTATCCTGGTATCGATATTAGAGAAGACTTAGC |
| HEY1 | | NM_012258 | 23462 | bHLH | Seed | hairy/enhancer-of-split related with YRPW motif 1 | GTTACTTTGACGCGCACGCCCTTGCTATGGACTATCGGAGTTTGGGATTT |
| HEY2 | | NM_012259 | 23493 | bHLH | Seed | hairy/enhancer-of-split related with YRPW motif 2 | AACAAACAATAAACCTTACCGACCCTGGGGGACAGAAGTTGGAGCTTTTT |
| HEYL | | NM_014571 | 26508 | bHLH | Seed | hairy/enhancer-of-split related with YRPW motif-like | CATGCTCTACCACTCCTGGGTCTCTGAAATCACTGAAATCGGGGCTTTCT |
| HHEX | | NM_002729 | 3087 | Homeobox | Seed | hematopoietically expressed homeobox | AGAATAAAGGTGCTTCTTTGGATAGCTCTCAATGTTCGCCCTCCCCTGCC |
| HIC1 | | NM_006497 | 3090 | ZnF-BTB/POZ | Seed | hypermethylated in cancer 1 | AAGTTCGCACAGCAACGCAACCTCATCAGCCACATGAAGATGCACGCCGT |
| HIC2 | | AB028943 | 23119 | ZnF-BTB/POZ | Seed | hypermethylated in cancer 2 | CGGCTTCAGTCACCCCACTTTAACTTTCTACCAGGACCCCCTCCCCCTAC |
| HIF1A | | NM_001530 | 3091 | bHLH | Seed | hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | CAGCCAGACGATCATGCAGCTACTACATCACTTTCTTGGAAACGTGTAAA |
| HIF3A | | NM_022462 | 64344 | bHLH | Seed | hypoxia inducible factor 3, alpha subunit | AGGAAAAGGCCTCCCCCCTTCTTAGCCCCATTTACCCCGTTTGTGGAAGG |
| HIRA | | NM_003325 | 7290 | Other | Seed | HIR (histone cell cycle regulation defective, S. cerevisiae) homolog A | TCCTCGTCTACGCACGGTACCTCGTAAACGAAGGGTTTGAATACCGACTT |
| HIS1 | | NM_006460 | 10614 | Other | Seed | HMBA-inducible | CAGAACATGAGCAAGCAGGAGCTCATCAAGGAGTACCTGGAACTGGAGAA |
| HIVEP1 | | NM_002114 | 3096 | ZnF-C2H2 | Seed | human immunodeficiency virus type I enhancer-binding protein 1 | CCCTCGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAA |
| HIVEP2 | | NM_006734 | 3097 | ZnF-C2H2 | Seed | human immunodeficiency virus type I enhancer-binding protein 2 | ACAGCAAGAAGAGACCTCTCCCCTAGAAGAGAGAGAAGATACATGACCAC |
| HIVEP3 | NT_004852:421 | NM_024503 | 59269 | ZnF-C2H2 | Found | human immunodeficiency virus type I enhancer binding protein 3 | CCTCCGTGTCGCCTGTGGCTAAGGTCTCCAAATTCACACTCTCCTCAGAG |
| HKR1 | | BC004513 | 3102 | ZnF-C2H2 | Seed | GLI-Kruppel family member HKR1 | GAAGACACAAACTGGGGAGACACCTTACATGTACACTGAGTGGGGAGACA |
| HKR2 | | M20676 | 3103 | ZnF-C2H2 | Seed | GLI-Kruppel family member HKR2 | AAGGCCTTTGGACAGAGAAGTCACCTTGTTCAGCACACCAGTGAGAAGCT |
| HKR3 | | NM_005341 | 3104 | ZnF-BTB/POZ | Seed | GLI-Kruppel family member HKR3 | ATGCACATCAAGGCCAAGCACAGGAATGAGAGGCCACACGTATGTGAGTT |
| HLF | | NM_002126 | 3131 | bZIP | Seed | hepatic leukemia factor | TCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACA |
| HLX1 | | NM_021958 | 3142 | Homeobox | Seed | H2.0 (Drosophila)-like homeo box 1 | GAGCGGACTGAGGGGAGTGAGCGTTCTCTGCACCAAACAACAGTTATTAA |
| HLXB9 | | NM_005515 | 3110 | Homeobox | Seed | homeo box HB9 | AGATTTGGTTCCAGAACCGGCGGATGAAATGGAAACGCAGCAAAAAGGCC |
| HMG20A | NT_024654:319 | NM_018200 | 10363 | Structural | Found | high-mobility group 20A | AACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAG |
| HMG20B | | NM_006339 | 10362 | Structural | Seed | high-mobility group 20B | TCCAGCCCCCCTAAAATTAAATTTCTGCAGCATCCCTTTAGCTTTCAATC |
| HMGA1 | | NM_002131 | 3159 | Beta-scaffold-HMG | Seed | high mobility group AT-hook 1 | CTCGGGGCCGACCAAAGGGAAGCAAAAACAAGGGTGCTGCCAAGACCCGG |
| HMGA2 | | NM_003483 | 8091 | Beta-scaffold-HMG | Seed | high mobility group AT-hook 2 | CAGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAAGAGGACTA |
| HMGB1 | | NM_002128 | 3146 | Structural | Seed | high-mobility group box 1 | GCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGG |
| HMGB2 | | NM_002129 | 3148 | Structural | Seed | high-mobility group box 2 | GAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAAGCTCGCTATGACA |
| HMGB3 | NT_011602:55 | NM_005342 | 3149 | Structural | Found | high-mobility group box 3 | |
| HMGN2 | | NM_005517 | 3151 | Structural | Seed | high-mobility group nucleosomal binding domain 2 | |
| HMX1 | | NM_018942 | 3166 | Homeobox | Seed | homeo box (H6 family) 1 | GGCCGAAAGAAGAAGACGCGCACAGTCTTCTCCCGCAGCCAGGTCTTCCA |
| HMX2 | | ENST00000224868 | 3167 | Homeobox | Seed | homeo box (H6 family) 2 | AGATCATTCTGGAGGAGAGCGACTCCGAGGAAAGCAAAAAGGAAGGCGAA |
| HMX3 | | XM_114950 | | Homeobox | Seed | homeo box (H6 family) 3 | TCCTCTCGCAGTGCGTTGCTAGGCTCCTCAAATTCAATCGACACAATTGA |
| HNF4A | | NM_000457 | 3172 | NHR | Seed | hepatocyte nuclear factor 4, alpha | CTGATGCAGGAACATATGGGAACCAACGTCATCGTTGCCAACACAATGCC |
| HNF4G | | NM_004133 | 3174 | NHR | Seed | hepatocyte nuclear factor 4, gamma | TTGTCTCAAGACCCATTAACTGGACAAACTATACTTTTAGGTCCCATGTC |
| HOP | | NM_032495 | 84525 | Homeobox | Seed | homeodomain-only protein | AGGACGCTAGGCTCTGCCGTCAGCCCGCAACAGCGCTCAGTCCAGGGAGG |
| HOXA1 | | NM_005522 | 3198 | Homeobox | Seed | homeobox A1 | AGTCAAAAGAAACCCTCCCAAAACAGGGAAAGTTGGAGAGTACGGCTACC |
| HOXA10 | | NM_018951 | 3206 | Homeobox | Seed | homeobox A10 | TATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATCGTCGGAGAG |
| HOXA11 | | NM_005523 | 3207 | Homeobox | Seed | homeobox A11 | TGCTCCTCTAACATGTATTTGCCAAGTTGTACTTACTACGTCTCGGGTCC |
| HOXA13 | | NM_000522 | 3209 | Homeobox | Seed | homeobox A13 | ACTTGAACGGGAATACGCCACGAATAAATTCATTACTAAGGACAAACGGA |
| HOXA2 | | NM_006735 | 3199 | Homeobox | Seed | homeobox A2 | CCAGGTTCCCTCGACAGTCCCGTAGATATTTCAGCTGACAGCTTAGACTT |
| HOXA3 | | NM_030661 | 3200 | Homeobox | Seed | homeobox A3 | GCCGCATGAAGTACAAAAAGGATCAGAAGGGCAAGGGCATGCTAACGTCA |
| HOXA4 | | NM_002141 | 3201 | Homeobox | Seed | homeobox A4 | ATGAAGAAGATCCATGTCAGCGCCGTTAACCCCAGTTATAACGGAGGGGA |
| HOXA5 | | NM_019102 | 3202 | Homeobox | Seed | homeobox A5 | TCATTTTGCGGTCGCTATCCAAATGGCCCGGACTACCAGTTGCATAATTA |
| HOXA6 | | NM_024014 | 3203 | Homeobox | Seed | homeobox A6 | AACCGCCGCATGAAGTGGAAAAAGGAAAACAAGCTCATCAATTCCACGCA |
| HOXA7 | | NM_006896 | 3204 | Homeobox | Seed | homeobox A7 | GTTCTTCGTATTATGTGAACGCGCTTTTTAGCAAATATACGGCGGGGACT |
| HOXA9 | | NM_002142 | 3205 | Homeobox | Seed | homeobox A9 | CCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCC |
| HOXB1 | | NM_002144 | 3211 | Homeobox | Seed | homeobox B1 | ATGGACTATAATAGGATGAACTCCTTCTTAGAGTACCCACTCTGTAACCG |
| HOXB13 | | NM_006361 | 10481 | Homeobox | Seed | homeobox B13 | GGAGTATGCGGCTAACAAGTTCATCACCAAGGACAAGAGGCGCAAGATCT |
| HOXB2 | | NM_002145 | 3212 | Homeobox | Seed | homeobox B2 | TTCTCTCGACAGCCCGGTCCCTTTTTCCGAGGAAGAGCTGGATTTTTTCA |
| HOXB3 | | NM_002146 | 3213 | Homeobox | Seed | homeobox B3 | CCTCACCAAACAGATATTCCCCTGGATGAAAGAGTCGAGGCAAACGTCCA |
| HOXB4 | | NM_024015 | 3214 | Homeobox | Seed | homeobox B4 | TGAAGTGGAAAAAAGACCACAAGTTGCCCAACACCAAGATCCGCTCGGGT |
| HOXB5 | | NM_002147 | 3215 | Homeobox | Seed | homeobox B5 | CCTTCTCGGGGCGTTATCCAAATGGCCCGGACTATCAGTTGCTAAATTAT |
| HOXB6 | | NM_018952 | 3216 | Homeobox | Seed | homeobox B6 | AGAAGTGCTCCACTCCGGTCTACCCGTGGATGCAGCGGATGAATTCGTGC |
| HOXB7 | | NM_004502 | 3217 | Homeobox | Seed | homeobox B7 | TTTCTAAATATCCAGCCTCAAGTTCGGTTTTCGCTACCGGAGCCTTCCCA |
| HOXB8 | | NM_024016 | 3218 | Homeobox | Seed | homeobox B8 | GGAGTTCCTATTTAATCCCTATCTGACTCGTAAGCGGCGAATCGAGGTAT |
| HOXB9 | | NM_024017 | 3219 | Homeobox | Seed | homeobox B9 | TTTCTGGGACGCTTAGCAGCTATTATGTCGACTCGATCATAAGTCACGAG |
| HOXC10 | | NM_017409 | 3226 | Homeobox | Seed | homeobox C10 | GTATTTGACGCGAGAGCGCCGCCTGGAGATTAGCAAGACCATTAACCTTA |
| HOXC11 | | NM_014212 | 3227 | Homeobox | Seed | homeobox C11 | AGCTGTCCCGGATGCTGAACCTGACGGACCGACAAGTGAAAATTTGGTTT |
| HOXC12 | | X99631 | 3228 | Homeobox | Seed | homeoboxC12 | GAGGGAACTCTCAGACCGCTTGAATCTTAGTGACCAGCAGGTCAAGATCT |
| HOXC13 | | NM_017410 | 3229 | Homeobox | Seed | homeobox C13 | AAAGAGAAGAAGGTGGTCAGCAAATCGAAAGCGCCTCATCTCCACTCCAC |
| HOXC4 | | NM_014620 | 3221 | Homeobox | Seed | homeobox C4 | TATTCGCAAAATAGCTACATCCCTGAACACAGTCCGGAATATTACGGCCG |
| HOXC5 | | NM_018953 | 3222 | Homeobox | Seed | homeobox C5 | CAATATCCCTGCCTATAACATGCAAACTTGTGGGAACTATGGATCGGCCT |
| HOXC6 | | NM_004503 | 3223 | Homeobox | Seed | homeobox C6 | AACACCTTAGGACATAACACACAGACCTCAATCGCTCAGGATTTTAGTTC |
| HOXC8 | | NM_022658 | 3224 | Homeobox | Seed | homeobox C8 | TCTTTAATCCTTATTTGACACGAAAACGTCGGATTGAAGTCTCTCATGCC |
| HOXC9 | | NM_006897 | 3225 | Homeobox | Seed | homeobox C9 | AGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGA |
| HOXD1 | | NM_024501 | 3231 | Homeobox | Seed | homeobox D1 | AAGTGAAGAGGAATGCCTCTAAGAAAGGTAAACTCGCCGAGTATGGGGCC |
| HOXD10 | | NM_002148 | 3236 | Homeobox | Seed | homeobox D10 | GCCTAGAGATCAGTAAGAGCGTTAACCTCACCGACAGGCAGGTCAAGATT |
| HOXD11 | | NM_021192 | 3237 | Homeobox | Seed | homeobox D11 | AAACTGAACAGAGACCGTCTGCAGTATTTCACTGGAAACCCCTTATTTTG |
| HOXD12 | | NM_021193 | 3238 | Homeobox | Seed | homeobox D12 | CAGAAACGCAAGGAATTGTCCAATAGGCTGAACCTCAGCGACCAGCAAGT |
| HOXD13 | | NM_000523 | 3239 | Homeobox | Seed | homeobox D13 | AAGAGTGAAGGACAAGAAAATTGTCTCCAAGCTCAAAGATACTGTCTCCT |
| HOXD3 | | NM_006898 | 3232 | Homeobox | Seed | homeobox D3 | ACCCAGGACTGTTTGGAGGCTATGGCTACAGCAAAACTACGGACACTTAC |
| HOXD4 | | NM_014621 | 3233 | Homeobox | Seed | homeobox D4 | GAATTTCATTTTAACAGGTATCTGACAAGGCGCCGTCGGATTGAAATCGC |
| HOXD8 | | NM_019558 | 3234 | Homeobox | Seed | homeobox D8 | TTTTTAACCCCTATCTGACCAGGAAAAGAAGAATCGAGGTTTCCCACGCC |
| HOXD9 | | NM_014213 | 3235 | Homeobox | Seed | homeobox D9 | GAGTTCGCCTCGTGTAGTTTTGCCCCCAGATCGGCCGTGTTCTCTGCCTC |
| HPCA | NT_004511:93 | NM_002143 | 3208 | Other | Found | hippocalcin | TTCAAGAAGATCTACGCCAACTTCTTTCCCTATGGTGACGCCTCCAAGTTTGCC |
| HPCAL1 | NT_005334:412 | NM_002149 | 3241 | Other | Found | hippocalcin-like 1 | ACAGACAAGATCTTCAGGCAGATGGACACCAACAATGACGGCAAACTGTCC |
| H-plk | | NM_015852 | 51351 | ZnF-C2H2 | Seed | Krueppel-related zinc finger protein | CCCAGTGATCTCTCCGGCCTCCTGATTCCCACAACATATAAGCATTCCTT |
| HR | | AF039196 | 3264 | Jumonji | Seed | hairless | AAGGAATCAACACAGAAAACGCCCCCAACTCCACAACCTTCCTGCAATGG |
| HRIHFB2122 | | NM_007032 | 11078 | Other | Seed | Tara-like protein (Drosophila) | AGTTCCTGCGAGCTAGAGGTGCTGCTTCGCGTAAAAGAAAACGAACTCCA |
| HRY | | NM_005524 | 3280 | bHLH | Seed | hairy (Drosophila)-homolog | AACACTGATTTTGGATGCTCTGAAGAAAGATAGCTCGCGGCATTCCAAGC |
| HS747E2A | | NM_015370 | 25770 | Other | Seed | hypothetical protein (RING domain) | AGGCCTGCAGGAGGCATCAGAGAGAGTAAAGAAAGTTCAAAGGAGAAAAA |
| HSA275986 | | NM_018403 | 55802 | Other | Seed | transcription factor SMIF | TTCTGTATAGAAATGCAAGCTTGTCGATATATAGTATCTGGTTTTATGAC |
| HSAJ2425 | | NM_017532 | 55566 | NHR | Seed | p65 protein | GTTCCCAGTTATGCTTCTCAAGATTAGCCATATTAGGCACATGGTTGGGG |
| HSF1 | | NM_005526 | 3297 | Heat shock | Seed | Heat shock transcription factor 1 | TGGACAAGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTG |
| HSF2 | | NM_004506 | 3298 | Heat shock | Seed | Heat shock transcription factor 2 | AAATCTAAATCCAAACCAGATAAGCAGCTTATCCAGTATACCGCCTTTCC |
| HSF2BP | | NM_007031 | 11077 | Co-activator | Seed | Heat shock transcription factor 2 binding protein | AGTGTACCAAACTCAAAGTGCTAATGCTGATGTCCCTATACAATGTAAGC |
| HSF4 | | NM_001538 | 3299 | Heat shock | Seed | Heat shock transcription factor 4 | ACTTCATCCAGTCGCCTTCTACTTACAGCCTCTCCCAGAGACAAATTTGG |
| HSFY | | NM_033108 | 86614 | Heat shock | Seed | Heat shock transcription factor, Y-linked | ATCAGTTGACCACTATTCATATGCACTCTCATAGTACCTACATGCAAGCA |
| HSGT1 | | NM_007265 | 11319 | Other | Seed | suppressor of S. cerevisiae gcr2 | TGAAACACGAATAATGACATCGGTCACATTCACTAAATGTCTATATGCAC |
| HSHPX5 | | X74862 | 55545 | Other | Seed | HPX-5 | GTTGCTCCAGAAACAGTACCTCTCCATTGCAGAGGGTGCGGACTTCTCCA |
| HSPC018 | | NM_014027 | 28961 | Other | Seed | HSPC018 protein | CTGGATCCATGCTTTACTGTGTTTAATGGGGGTAACAGGGGTCCCTACAG |
| HSPC059 | NT_011233:37 | NM_016536 | 51276 | ZnF-C2H2 | Found | HSPC059 protein | TGCAAAGGCAACTTAGAGGGTCAAGAAGCAAGTCAGGAAGGGCTTTACATGTGTG |
| HSPC063 | NT_033899:972 | NM_014155 | 29068 | ZnF-C2H2 | Found | HSPC063 protein | GGATTCAGCCTGAGAAAGTTAAGCACGCAGAAAATACCCGGACTTTAGAATTACC |
| HSPC189 | | NM_016535 | 51545 | Other | Seed | HSPC189 protein | CTTTATGGAGCAGAACACACTGCAGAAACACACGCGGTGGAAGCATCCAT |
| HSPX153 | | X76978 | 54729 | Homeobox | Seed | HPX-153 homeobox | AGCAGCTCGTGGCGCTGGAGAACAAGTTCAAGGCCACGCGCTACCTGTCG |
| HSRNAFEV | NT_005403:123 | NM_017521 | 54738 | Trp Cluster-Ets | Found | FEV protein | ACCTTTTTTCTTCTAGGTCTCCAGGTCCCGGAGGGGATTTGTGGACCTCTC |
| HSU79252 | | NM_013298 | 29787 | Other | Seed | hypothetical protein | TTTGGAATCAGTCACCAGTCTTTCTGTACTGTCTTGGTTAGCTCTATATA |
| HSZFP36 | | X51760 | 55552 | ZnF-C3H | Seed | ZFP-36 for a zinc finger protein | GAATTCCGAGAGAGAGACGCCCTGGAAGGTCTGTATCAGCGTCTGTCGCG |
| HTATIP | | NM_006388 | 10524 | Co-activator | Seed | HIV-1 Tat interactive protein, 60 kDa | ACATCCTCCAGGCAATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTG |
| HTLF | | NM_002158 | 3344 | Forkhead | Seed | T-cell leukemia virus enhancer factor | TGGAATTCGTACATGTTTAGGTTCCCTAATAAGTACTGCAAAGACACAAA |
| HUMPPA | NT_010677:83 | NM_014603 | 30850 | ZnF-PHD | Found | paraneoplastic antigen | AGATGAAGCAGGCCAAGACCTACCTACTGGGTCCGGACGACCACCTGGCC |
| HYPH | | AB023163 | 23390 | ZnF-Other | Seed | Huntingtin interacting protein H | ATCCTTTTTCGATCATTCAATGCATAGTGCATTGCCCCTTGGGATATATT |
| HZF12 | NT_011295:582 | NM_033204 | 94039 | ZnF-C2H2 | Found | zinc finger protein 12 | CCAGTAGTGGTGCACGGCGCACAGTAACACCAACTCGAAAGAGACCTTATGAA |
| ICSBP1 | | NM_002163 | 3394 | Trp cluster-IRF | Seed | interferon consensus sequence binding protein 1 | ACCAGGTCTTCCGGATGTTTCCAGATATTTGTGCCTCACACCAGAGATCA |
| ID1 | | NM_002165 | 3397 | bHLH | Seed | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein | ATGAAAGTCGCCAGTGGCAGCACCGCCACCGCCGCCGCGGGCCCCAGCTG |
| ID2 | | NM_002166 | 3398 | bHLH | Seed | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | TGTCCTTGCAGGCTTCTGAATTCCCTTCTGAGTTAATGTCAAATGACAGC |
| ID2B | NT_005999:169 | M96843 | 84099 | bHLH | Found | inhibitor of DNA binding 2B, dominant negative helix-loop-helix protei | AGCATCCTGTCCTTGCAGGCTTCTGAATTCCCTTCGGAGTTAATGTCAAATG |
| ID3 | | NM_002167 | 3399 | bHLH | Seed | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein | ACTCAGCTTAGCCAGGTGGAAATCCTACAGCGCGTCATCGACTACATTCT |
| ID4 | | NM_001546 | 3400 | bHLH | Seed | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein | CCAACAAGAAAGTCAGCAAAGTGGAGATCCTGCAGCACGTTATCGACTAC |
| IGHMBP2 | | NM_002180 | 3508 | ZnF-AN1 | Seed | immunoglobulin mu binding protein 2 | CACAGCATGGGGAAGTACGCACGGCCTTTGAGTATCTTGACGATATTGTC |
| ILF1 | | NM_004514 | 3607 | Forkhead | Seed | interleukin enhancer binding factor 1 | CCAGCTACCAATAAAAACTGTAACACAAAACGGCACTCACGTGGCATCAG |
| ILF2 | | NM_004515 | 3608 | ZnF-C2H2 | Seed | interleukin enhancer binding factor 2, 45 kDa | ACATGGTCTGCTATACAGCTCAGACTCTCGTCCGAATCCTCTCACATGGT |
| ILF3 | | NM_012218 | 3609 | ZnF-C2H2 | Seed | interleukin enhancer binding factor 3, 90 kDa | GATCCGACTACAACTACGAGAGCAAATTCAACTACAGTGGTAGTGGAGGC |
| INSM1 | | NM_002196 | 3642 | ZnF-C2H2 | Seed | insulinoma-associated 1 | TCAACAAGTGCCACCCATCCGAAAACAGACAGGTGATCCTCCTGCAGGTG |
| INSM2 | | NM_032594 | 84684 | ZnF-C2H2 | Seed | insulinoma-associated protein IA-6 | TGCGTGCATGTCTCAATGTCCACAAAGGATTCTGGCTACCCTTTGGTAGC |
| IPF1 | | NM_000209 | 3651 | Homeobox | Seed | insulin promoter factor 1, homeodomain transcription factor | CTGCTAGAGCTGGAGAAGGAGTTCCTATTCAACAAGTACATCTCACGGCC |
| IRF1 | | NM_002198 | 3659 | Trp cluster-IRF | Seed | interferon regulatory factor 1 | ACTCGGATGCGCATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCA |
| IRF2 | | NM_002199 | 3660 | Trp cluster-IRF | Seed | interferon regulatory factor 2 | GTGTCTTCCTATGCAGAAAGCGAAACGACTGATAGTGTGCCCAGCGATGA |
| IRF3 | | NM_001571 | 3661 | Trp cluster-IRF | Seed | interferon regulatory factor 3 | CCTTCATTGTAGATCTGATTACCTTCACGGAAGGAAGCGGACGCTCACCA |
| IRF4 | | NM_002460 | 3662 | Trp cluster-IRF | Seed | interferon regulatory factor 4 | GCAATCCAGAAGATTACCACAGATCTATCCGCCATTCCTCTATTCAAGAA |
| IRF5 | | NM_002200 | 3663 | Trp cluster-IRF | Seed | interferon regulatory factor 5 | ATCCAGCGGGAGGTCAAGACCAAGCTTTTCAGCCTGGAGCATTTTCTCAA |
| IRF6 | | NM_006147 | 3664 | Trp cluster-IRF | Seed | interferon regulatory factor 6 | TCTTGGTTCAGGTCATTCCAGTAGTGGCTCGGATGATCTACGAGATGTTT |
| IRF7 | | NM_001572 | 3665 | Trp cluster-IRF | Seed | interferon regulatory factor 7 | ATGGCCTTGGCTCCTGAGAGGGCAGCCCCACGCGTGCTGTTCGGAGAGTG |
| IRLB | | X63417 | 10260 | Other | Seed | c-myc promoter-binding protein | AAGTACAGGGGTGATGGAATGTCGAAAAACCTTTGGAGAACCTTATCTTT |
| IRX1 | | U90307 | 79192 | Homeobox | Seed | iroquois homeobox protein 1 | TCGCAGCCCACACGGCGCCGGCTTATTACCCCTACGGCCAGTTCCAATAC |
| IRX2 | | AF319967 | 93965 | Homeobox | Seed | iroquois homeobox protein 2 | TCGCCCTTCTACGGCAACTACACAAACTACGGGAACTTGAACGCGGCGCT |
| IRX3 | | U90308 | 79191 | Homeobox | Seed | iroquois homeobox protein 3 | CTTCTACCCGTATGGCCAGTACCAGTTCGGGGACCCGTCCCGTCCCAAGA |
| IRX4 | | NM_016358 | 50805 | Homeobox | Seed | iroquois homeobox protein 4 | TTCTACTCGCTGAACAGCTTTGATTCCAAGGATGGTTCGGGATCTGCGCA |
| IRX5 | | NM_005853 | 10265 | Homeobox | Seed | iroquois homeobox protein 5 | AAATGTTGCGGAGCCAGTCTCAGCTAGACCTGTGCAAAGACTCTCCCTAT |
| IRX6 | | U90305 | 79190 | Homeobox | Seed | iroquois homeobox protein 6 | GACTCTGGGGCAGTACCAATATGAACGATATGGCGCAGTGGAATTGAGTG |
| ISGF3G | | NM_006084 | 10379 | Trp cluster-IRF | Seed | interferon-stimulated transcription factor 3, gamma (48kD) | GAAGAGAGCCATGGCTCCAGCCATACTCCACAGAATCTTATCACAGTGAA |
| ISL1 | | NM_002202 | 3670 | Homeobox | Seed | ISL1 transcription factor, LIM/homeodomain, (islet-1) | CAACTTCCAGATACACCTAACAGCATGGTAGCCAGTCCTATTGAGGCATG |
| ISL2 | | AK001022 | 64843 | Homeobox | Seed | ISL2 transcription factor, LIM/homeodomain, (islet-2) | CCTGCTTTCACCAGACTGCAGACCCCTGCTCCGAGGACTCTTAGTTTTTC |
| IVNS1ABP | NT_004487:955 | NM_006469 | 10625 | ZnF-BTB/POZ | Found | influenza virus NS1A binding protein | AGCTAATCGAAAAGCCCATGTCTCCTATGCAGTACGCACGATCTGGTCTGGG |
| Jade-1 | NT_016354:276 | NM_024900 | 79960 | ZnF-PHD | Found | PHD protein Jade-1 | CACATAGGAAACCCGAGGAGAGTCTTGGCAAGGGGGCTGCACAGGAGAAT |
| JARID1A | NT_009759:29 | NM_005056 | 5927 | Jumonji | Found | Jumonji, AT rich interactive domain 1A (RBP2-like) | TCCTGGAAGTATCTCTGGACGAGACTCAACACATATGGCGGATTTTGCAGGC |
| JARID1B | NT_034408:191 | NM_006618 | 10765 | Jumonji | Found | Jumonji, AT rich interactive domain 1B (RBP2-like) | TGGGACTGATCCTTTCTACCAGACTTAACTTCTTCAGGGCAGGAACTCTGATACA |
| JARID1D | NT_011875:152 | NM_004653 | 8284 | Jumonji | Found | Jumonji, AT rich interactive domain 1D (RBP2-like) | CAGACCGTGAAAATATGTTCCTGACACCTTCCACAGACCACAGCCCTTTCTTGA |
| JDP2 | NT_026437:1173 | NM_130469 | 122953 | bZIP | Found | jun dimerization protein 2 | |
| JMJ | | NM_004973 | 3720 | Jumonji | Seed | jumonji homolog (mouse) | CTTTGAGACCGCCAAGGAAATGAAGCGTCGCCATATAGCTAAGCCATTCT |
| JMJD1 | NT_015805:184 | NM_018433 | 55818 | Jumonji | Found | jumonji domain containing 1 | GGACCAATGAAATCATCACAGGAGCCACAGTAGGAGACTTCTGGGATGGATTTGA |
| JMJD2 | NT_032971:21 | BC002558 | 9682 | Jumonji | Found | jumonji domain containing 2 | GGAAGTGGTCCAAGTGAGATGGACAGACGGCCAAGTCTATGGAGCCAAGT |
| JMJD2B | NT_011255:298 | AK026040 | 23030 | Jumonji | Found | jumonji domain-containing 2B | AGAGGAAACCAAGTCTAGAAAGGAAGAAAGAGCAGACCAAAAGGCCGGGGCTGTC |
| JUN | | NM_002228 | 3725 | bZIP | Seed | v-jun avian sarcoma virus 17 oncogene homolog | AAGCTGGAGAGAATCGCCCGGCTGGAGGAAAAAGTGAAAACCTTGAAAGC |
| JUNB | | NM_002229 | 3726 | bZIP | Seed | Jun B proto-oncogene | ACTAAAATGGAACAGCCCTTCTACCACGACGACTCATACACAGCTACGGG |
| JUND | | NM_005354 | 3727 | bZIP | Seed | Jun D proto-oncogene | AAGAGAAAGTGAAGACCCTCAAGAGTCAGAACACGGAGCTGGCGTCCACG |
| KBTBD10 | NT_005332:189 | NM_006063 | 10324 | ZnF-BTB/POZ | Found | kelch repeat and BTB (POZ) domain containing 10 | TTCCTCGTTCCATGTTTGGAGTAGCAGTCCATAAAGGCAAAATTGTGATTGCAGG |
| KBTBD5 | NT_005825:210 | NM_152393 | 131377 | ZnF-BTB/POZ | Found | kelch repeat and BTB (POZ) domain containing 5 | GAGAAGCTCTCAACTCCATCTACGTGGTCGGTGGCAGAGAGATCAAGGAC |
| KBTBD7 | NT_009984:758 | NM_032138 | 84078 | ZnF-BTB/POZ | Found | kelch repeat and BTB (POZ) domain containing 7 | GCTATGACCCTTACTCGGGGGACATTTACACAATGCCATCCCCTTTGACCAGCT |
| KCNIP1 | NT_023132:191 | NM_014592 | 30820 | Other | Found | Kv channel interacting protein 1 | ATGGGGAAATACACATATCCTGTGCTCAAAGAGGACACTCCAAGGCAGCATGTG |
| KCNIP2 | NT_030059:932 | NM_014591 | 30819 | Other | Found | Kv channel interacting protein 2 | GTCCGTGATTCTTCGGGGAACTGTAGATGACAGGCTTAATTGGGCCTTCAACCT |
| KCNIP4 | NT_006344:469 | NM_025221 | 80333 | Other | Found | Kv channel interacting protein 4 | TCGAGGATTTCATCAAAGGTCTTTCCATTTTGCTCCGGGGGACAGTACAAGAAAA |
| KEAP1 | | NM_012289 | 9817 | Other | Seed | Kelch-like ECH-associated protein 1 | AGAATCTACGTCCTTGGAGGCTATGATGGTCACACGTTCCTGGACAGTGT |
| KIAA0014 | | NM_014665 | 9684 | Other | Seed | KIAA0014 gene product | GGAGAAGTTTGCCCGCGTAGAAGCTGAGTTGCACCAGCTGCTTCTAGCCT |
| KIAA0040 | | NM_014656 | 9674 | Other | Seed | KIAA0040 gene product | TATATACAATTTCCTAACCAGCAAGGCCCCCATACACCATCTATTCCATA |
| KIAA0173 | | NM_014640 | 9654 | Other | Seed | KIAA0173 gene product | CTGCGGATCTATGTTTATGTCACTTCCTACGATCCTCTGCGGATTTACCT |
| KIAA0194 | | D83778 | 22993 | Beta-scaffold-HMG | Seed | KIAA0194 protein | CCATTGCCTTCGACAATGCCACTCACTATTACCTCTACAACCGCCTCATG |
| KIAA0211 | | NM_014630 | 9640 | ZnF-C2H2 | Seed | KIAA0211 gene product | ATCCGCAACAACCATGACACAGTAAAGAAGTTCTACACCTGCGGGTACTG |
| KIAA0222 | | NM_014643 | 9658 | ZnF-C2H2 | Seed | KIAA0222 gene product | AAACAAGGGAGAGACCATTCTAACACAGGTACCGTCCAGACAGTGCCTCT |
| KIAA0237 | | NM_014747 | 9783 | Other | Seed | KIAA0237 gene product | AAGACAAAGATGACCAAGAAGACCTGTGATCCCCTGTACCAGCAGGCTCT |
| KIAA0296 | | NM_014699 | 9726 | ZnF-C2H2 | Seed | KIAA0296 gene product | CAAACTTCTCCCTAACCTGCTGTCTCTTAAGAACCACAGCAGGACCCACA |
| KIAA0326 | | AB002324 | 23361 | ZnF-C2H2 | Seed | KIAA0326 protein | GCCCCTTCTTAAGTGGGAAGCCCTTTAAATGCCCTGAATGCAAACAAAGC |
| KIAA0339 | NT_024826:22 | BC027450 | 9739 | Structural | Found | KIAA0339 gene product | CTGACTGGCTCAACGACACTCACTGGGTCCATCACACAATCACCAACCTG |
| KIAA0352 | | NM_014830 | 9880 | ZnF-BTB/POZ | Seed | KIAA0352 gene product | TTCATGTACATCATCCATTCCAAAGAGGCGGATAAGAACCCGGACAGTTG |
| KIAA0390 | NT_011196:162 | AB002388 | 9745 | ZnF-C2H2 | Found | KIAA0390 gene product | GGCCTACAGTTCTGATGGCTTAGCAGCCTTTAACGGACTTGCAAGTAGCACAGCA |
| KIAA0431 | NT_024797:404 | BC002701 | 23300 | ZnF-C2H2 | Found | KIAA0431 protein | CCCAGAACCCCGGAATCGATTTTGATATCGAAGAGTTCTTTTCGGCCTCAAA |
| KIAA0441 | | NM_014797 | 9841 | ZnF-BTB/POZ | Seed | KIAA0441 gene product | TTCTCGTAACCGATTCTGTACATAACATCAATTTCATGCCCGGTCCTAGC |
| KIAA0445 | NT_034376:1 | AB007914 | | Other | Found | hypothetical protein KIAA0445 | |
| KIAA0469 | | NM_014851 | 9903 | ZnF-BTB/POZ | Seed | KIAA0469 gene product | TGTCATCGTGATGAGTGTTTGGGATCCACAGCCATGATGGATGGGTCTCA |
| KIAA0478 | | NM_014870 | 9923 | ZnF-C2H2 | Seed | KIAA0478 protein | CCATTCCGGTGCTTGTACTGTGCTGCTACTTTCCGTTTTCCTGGAGCATT |
| KIAA0543 | NT_007914:871 | BC041427 | 23145 | ZnF-C2H2 | Found | KIAA0543 gene product | CTGAACTTCCTCATTCAGGACCCCCGTGGAAACACAGTGAGCATCCTTAT |
| KIAA0602 | | AB011174 | 23241 | Other | Seed | KIAA0602 protein | GACTTTACCCTAAGCCCTGACGAAGAGTCCTCCCAAAAGTTCATTCCCTT |
| KIAA0628 | NT_023684:59 | AB014528 | 9831 | ZnF-C2H2 | Found | KIAA0628 gene product | AAGGCCCCCATACATTTGGGTGAGAGGTCTGTAGATAAGGGGGAACACACAGG |
| KIAA0669 | | NM_014779 | 9819 | bZIP | Seed | KIAA0669 gene product | CTTTAGTCGGGCAAGTCGACGATACTAGAAGAAAATCAGAACCCCTACCT |
| KIAA0798 | | NM_014650 | 9668 | ZnF-C2H2 | Seed | KIAA0798 gene product | CTCTGTAAGTACAAAAGCCAATAGCACTAAATCCCAAGTCAGTAAGCATC |
| KIAA0924 | NT_010783:119 | | 22834 | ZnF-C2H2 | Found | KIAA0924 protein | |
| KIAA0961 | | NM_014898 | 22835 | ZnF-C2H2 | Seed | KIAA0961 protein | GTTCTTTCGTCGTTACTCAGAACTTATTTCACATCAGGGTATTCACATTG |
| KIAA0972 | | NM_014930 | 22869 | ZnF-C2H2 | Seed | KIAA0972 protein | GCAATGAATATGGGAAATTATGTAAGAAGTCTACCCTAAGCTTATACCAG |
| KIAA0998 | | NM_015072 | 23093 | Other | Seed | KIAA0998 protein | CTGGAGGCTGCAGGAGAATTCCAGTTTTGGTATTCCATGCCGACGCTATT |
| KIAA1041 | | NM_014947 | 22887 | Forkhead | Seed | KIAA1041 protein | AATGATTGGTATGCGACACTTGATATGCTAAAAGAAAGCTGTCGAATTGC |
| KIAA1076 | NT_009487:55 | AB028999 | 23067 | Structural | Found | KIAA1076 gene product | CCATGACACCATCATCGACGCCACCAAGTGCGGCAACTTCGCGCGCTTCATCA |
| KIAA1190 | | NM_145166 | 92999 | Other | Seed | hypothetical protein KIAA1190 | TGTGCCAATGGTGCGGCAAGGACTTCAACATGAAGCAGTACTTCGATGAG |
| KIAA1285 | NT_007914:800 | NM_015694 | 27153 | ZnF-MIZ | Found | KIAA1285 protein | GCCGCGTTTCCCCGGGGGCCCCAGGGGGGAGGGCGCGGACCTGGGGAACCCT |
| KIAA1309 | NT_028406:7 | NM_033495 | 90293 | ZnF-BTB/POZ | Found | KIAA1309 | AACGGCAGTTGATACAGTCTTCAGATTTGATCCTCGATACAATAAATGGATGCAA |
| KIAA1321 | | AB037742 | 57532 | Other | Seed | KIAA1321 protein | TCAAGTTCTGGGTAGCATTCTAAAATCTGGGACTACTAGTGAGAGTGGAG |
| KIAA1340 | NT_009471:56 | AB037761 | 57542 | ZnF-BTB/POZ | Found | KIAA1340 gene product | CAGGATGCGTGGAATTTTGTGGCGCCCTTACCCAATCCTCTGGCTGAGTT |
| KIAA1384 | NT_010966:160 | AB037805 | 57565 | ZnF-BTB/POZ | Found | KIAA1384 gene product | GGGGTGTACACAATGGAGAATATGTCCCATGGCTATATTGCTATGACCCAGTAAT |
| KIAA1441 | NT_021907:147 | NM_020832 | 57592 | ZnF-C2H2 | Found | KIAA1441 protein | GACCTGTAAGGTCTGTGGCAAGAGCTGCGACAGCCCTCTAAACCTCAAGACC |
| KIAA1442 | | AB037863 | 57593 | Other | Seed | KIAA1442 protein | TCTGAACGAGCCCACCATTGACTACGGATTCCAGAGGCTACAGAAAGTCA |
| KIAA1474 | NT_011196:202 | NM_020856 | 57616 | Homeobox | Found | teashirt 3 | AGAGTCACACTTAGGCTTCCGGCTACGGGACTTATCCAAACTGTCCACCGAACAG |
| KIAA1542 | | AB040975 | 57661 | ZnF-PHD | Seed | KIAA1542 protein | AAGTAAGAGCTCAGCGACAAGATCTAAGAAACGCCAACATCGAGTGAAGA |
| KIAA1668 | | AB051455 | 85377 | Other | Seed | KIAA1668 protein | AGATGTTGAAACTGCTAGGAAACAAACGTGATGCCAAGAGCAAGTCCCCC |
| KIAA1862 | NT_007914:846 | AB058765 | 84626 | ZnF-C2H2 | Found | KIAA1862 protein | CCTCCCACGGGGACCTCGCTGGGCTCATGGCCCTGGTCACAGACATCTGC |
| KLF1 | | NM_006563 | 10661 | ZnF-C2H2 | Seed | Kruppel-like factor 1 (erythroid) | CTTTTTCGCGCTCTGACCACCTGGCCTTGCACATGAAGCGCCACCTTTGA |
| KLF12 | | NM_007249 | 11278 | ZnF-C2H2 | Seed | Kruppel-like factor 12 | AGAGGTACATCCGTCCCCAGTATCAAGGGTCCGGGGAAATCGAATGAATA |
| KLF13 | | NM_015995 | 51621 | ZnF-C2H2 | Seed | Kruppel-like factor 13 | GAGAAAGTTTACGGGAAATCTTCGCACCTCAAGGCGCACCTGAGAACTCA |
| KLF14 | | NM_138693 | 136259 | ZnF-C2H2 | Seed | Kruppel-like factor 14 | ACTGGGGGCCGGAAAATAGCGGGAATTCTTGCAACGTGTATATCATCCTA |
| KLF15 | | NM_014079 | 28999 | ZnF-C2H2 | Seed | Kruppel-like factor 15 | CCAAGAACCCAGCCGCAGAACTCATCAAAATGCACAAATGTACTTTCCCT |
| KLF16 | | NM_031918 | 83855 | ZnF-C2H2 | Seed | Kruppel-like factor 16 | CCGGACTGCGCCAAAGCCTACTACAAGTCCTCGCACCTAAAGTCGCACCT |
| KLF2 | | NM_016270 | 10365 | ZnF-C2H2 | Seed | Kruppel-like factor 2 (lung) | CCTTTTCGCGCTCCGATCACCTGGCGCTGCACATGAAACGGCACATGTAG |
| KLF3 | | NM_016531 | 51274 | ZnF-C2H2 | Seed | Kruppel-like factor 3 (basic) | CTTTACCTGTGGAATCCCCGGATACTCAAAGGAAGCGGAGGATACACAGA |
| KLF4 | | NM_004235 | 9314 | ZnF-C2H2 | Seed | Kruppel-like factor 4 (gut) | GGAGTTCAACGATCTCCTGGACCTGGACTTTATTCTCTCCAATTCGCTGA |
| KLF5 | | NM_001730 | 688 | ZnF-C2H2 | Seed | Kruppel-like factor 5 (intestinal) | GAAGGAGTAACCCCGATTTGGAGAAACGACGCATCCACTACTGCGATTAC |
| KLF7 | | NM_003709 | 8609 | ZnF-C2H2 | Seed | Kruppel-like factor 7 (ubiquitous) | TTGGCTAGTTATAGTATATTCCAGGAGCTACAACTTGTCCACGACACCGG |
| KLF8 | | NM_007250 | 11279 | ZnF-C2H2 | Seed | Kruppel-like factor 8 | ATCAAGCCTTTTCGGTGCACAGACTGCAACCGCAGCTTTTCTCGTTCTGA |
| KLHL1 | NT_024524:413 | NM_020866 | 57626 | ZnF-BTB/POZ | Found | kelch-like 1 (Drosophila) | ATGATCCTCATACAAATAAGTGGAACATGTGTGCTCCCATGTGTAAGAGG |
| KLHL3 | NT_016714:116 | NM_017415 | 26249 | ZnF-BTB/POZ | Found | kelch-like 3 (Drosophila) | TCGGTGGAGTACTACAATCCTGTCACTGACAAATGGACGCTGCTTCCAACG |
| KLHL4 | NT_011689:82 | NM_019117 | 56062 | ZnF-BTB/POZ | Found | kelch-like 4 (Drosophila) | GGCAGGTTGAAGAGCCACTCTCGGGACAGAAACGGACTGAAGAAAAGCAAC |
| KLHL5 | | NM_015990 | 51088 | ZnF-BTB/POZ | Seed | kelch-like 5 (Drosophila) | GAGTGGACCCAGGTATTTTCACATACTTTTGAGGACAGCAAAGATCACCT |
| KLHL6 | NT_022676:150 | NM_130446 | 89857 | ZnF-BTB/POZ | Found | kelch-like 6 (Drosophila) | GAGGCTAAATGCATCAATGCAGTGAGTTTCCGGGACCGCATCTATGTCGTT |
| KLHL8 | NT_006204:183 | NM_020803 | 57563 | ZnF-BTB/POZ | Found | kelch-like 8 | GAGTTCAGTTGAGCGGTATGACCCCCGAAGCAACAAGTGGGATTATGTGG |
| KR18 | | NM_033288 | 90338 | ZnF-C2H2 | Seed | KRAB zinc finger protein KR18 | GAAACCTATAACCGCATTTTGTGCTTGAATTACGTGCCCCACACTGTGGC |
| KRBO3 | NT_011109:1357 | NM_182512 | 147658 | ZnF-C2H2 | Found | KRAB domain only 3 | GAGGAGCCAACCGGCCCAAACTTTGTGGGAAATGACTCCCCTCTGCCCTC |
| L3MBTL | | NM_015478 | 26013 | Other | Seed | l(3)mbt-like (Drosophila) | CCTCTGCTCTCTACCCACTCATTTGCTTGCCAAACTTAGCTTTGCCAGTG |
| LAF4 | | NM_002285 | 3899 | AF-4 | Seed | lymphoid nuclear protein related to AF4 | TCCTGTACTGGCGGATGTTTCGACTCAAAAGGGACCACGCTGTAAAGTAT |
| LARP | | NM_015315 | 23367 | Other | Seed | likely ortholog of mouse la related protein | AACACGTCTACCATAAGTATCGTAGGCGCTGCCTTAATGAGCGGAAACGC |
| LBX1 | | NM_006562 | 10660 | Homeobox | Seed | transcription factor similar to D. melanogaster homeodomain protein lady bird late | CGAAAGTCGCGCACGGCCTTCACCAACCACCAGATCTATGAATTGGAAAA |
| LDB1 | | NM_003893 | 8861 | Co-activator | Seed | LIM domain binding 1 | CTCCAAAAACATCACTCGGTGTGGGCTGTCCAATTCCACTCTCAACTACC |
| LDB2 | | NM_001290 | 9079 | Co-activator | Seed | LIM domain binding 2 | ACGAGGACGAAAGGCTAATCACTAGATTAGAAAACACGCAATATGATGCG |
| LDOC1 | | NM_012317 | 23641 | bZIP | Seed | leucine zipper, down-regulated in cancer 1 | TGGGATGACGACGAAGACGACGACGACGAAGAAGAGGAGGATGATTATTA |
| LEF1 | | NM_016269 | 51176 | Beta-scaffold-HMG | Seed | lymphoid enhancer factor 1 | AGAGAGAAACTACAGGAATCTGCATCAGGTACAGGTCCAAGAATGACAGC |
| LHX1 | | NM_005568 | 3975 | Homeobox | Seed | LIM homeobox protein 1 | ATCCCCAATGGTCCCTTCTCCTTCTACGGAGATTACCAGAGCGAGTACTA |
| LHX2 | | NM_004789 | 9355 | Homeobox | Seed | LIM homeobox protein 2 | TCGGGACTTGGTTTATCACCTCAACTGCTTCACGTGCACCACGTGTAACA |
| LHX3 | | NM_014564 | 8022 | Homeobox | Seed | LIM homeobox protein 3 | AGCGTTTACTGCAAGGACGACTTTTTCAAGCGCTTCGGGACCAAGTGCGC |
| LHX4 | | NM_033343 | 89884 | Homeobox | Seed | LIM homeobox protein 4 | TATCCCGACTTTCCAACTAGCCCAGGCTCTTGGCTCGATGAAATGGATCA |
| LHX5 | | NM_022363 | 64211 | Homeobox | Seed | LIM homeobox protein 5 | TGGCACATCAAATGTGTTCAGTGCTGCGAGTGCAAAACCAACCTCTCGGA |
| LHX6 | | NM_014368 | 26468 | Homeobox | Seed | LIM homeobox protein 6 | AGAGTCATCCAGGTGTGGTTTCAAAACTGCCGGGCGCGTCATAAAAAGCA |
| LHX8 | | AB050476 | | Homeobox | Seed | LIM homeobox protein 8 | GATGGAACGATGTTAACTGCGCTGCATAGTTATATGGATGCTCATTCACC |
| LHX9 | | AJ277915 | 56956 | Homeobox | Seed | LIM homeobox protein 9 | ACCTGACCAATCCCACTATCACTGTAGTGACATCCGTGACCTCTAACATG |
| LIM | | NM_006457 | 10611 | Co-activator | Seed | LIM protein (similar to rat protein kinase C-binding enigma) | GCTACACCTGGCATGACACTTGCTTTGTATGCTCAGTGTGTTGTGAAAGT |
| LIN28 | | NM_024674 | 79727 | Beta-scaffold-cold-shock | Seed | RNA-binding protein LIN-28 | TGCTACAACTGTGGAGGTCTAGATCATCATGCCAAGGAATGCAAGCTGCC |
| LISCH7 | | NM_015925 | 51599 | bHLH | Seed | liver-specific bHLH-Zip transcription factor | CGCAGGCTCAAGAAGAACTTGGCCCTGAGTCGGGAAAGTTTAGTCGTCTG |
| LMO1 | | NM_002315 | 4004 | ZnF-Other | Seed | LIM domain only 1 (rhombotin 1) | ACAACATGATCTTGTGTCAGATGGACTATGAGGAAGGGCAGCTCAATGGC |
| LMO2 | | NM_005574 | 4005 | ZnF-Other | Seed | LIM domain only 2 (rhombotin-like 1) | TCAACTCTGACATAGTGTGCGAACAGGACATCTACGAGTGGACTAAGATC |
| LMO4 | | NM_006769 | 8543 | ZnF-Other | Seed | LIM domain only 4 | GCCATTTGAATTCACTTCAGAGCAATCCACTACTGCCAGACCAGAAGGTC |
| LMO6 | | NM_006150 | 4007 | ZnF-Other | Seed | LIM domain only 6 | CATGCCTGCTCAGGACACTGCAATGGAGACCTTCAACTCCCCATCTTTAT |
| LMO7 | | NM_005358 | 4008 | ZnF-Other | Seed | LIM domain only 7 | CTGCGTAACAGGTCAGTCAGTGGGAAGCGCATATGCTCCTACTGCAATAA |
| LMX1A | | AY078398 | 4009 | Homeobox | Seed | LIM homeobox transcription factor 1, alpha | CTCTGCAGTCCAGAGTGGGAAACCCCATTGACCATCTGTACTCCATGCAG |
| LMX1B | | NM_002316 | 4010 | Homeobox | Seed | LIM homeobox transcription factor 1, beta | AGCTGCTACTTCCGGGATCGGAAACTGTACTGCAAACAAGACTACCAACA |
| LOC113655 | | BC011982 | 113655 | Other | Seed | hypothetical protein BC011982 | ATGCGCGGGAAGTTGCTGCCGCTGGCCGGCCTCTACCTGGTGCAGGGCCT |
| LOC115468 | NT_035560:126a | NM_145326 | 115648 | ZnF-C2H2 | Found | similar to hypothetical protein FLJ13659 | |
| LOC115509 | NT_024802:36 | NM_138447 | 115509 | ZnF-C2H2 | Found | hypothetical protein BC014000 | AGGCCCCAAACTGTAGCCCTAGATCTGCTATCGGGGGCTCCAGTCAGAGG |
| LOC115950 | NT_011176:403 | NM_138783 | 115950 | ZnF-C2H2 | Found | hypothetical protein BC016816 | AAGGAGGAGAAGGAGGAGCCAGTAGCCCCGGAGCTGGCAACAACGGTGCC |
| LOC126295 | NT_011255:1 | NM_173480 | 126295 | ZnF-C2H2 | Found | hypothetical protein LOC126295 | GTCGGATGGCGTTTAATGGGTTCGCAAGCTTCACTAGACATGTGAGAACTC |
| LOC146542 | NT_024802:32a | NM_145271 | 146542 | ZnF-C2H2 | Found | similar to hypothetical protein MGC13138 | GAGCCAAAGGGCCTAGAAAGGCTCCTGTGAAGGAGAGTCCTGAAGTGCTG |
| LOC148213 | NT_033317:111 | NM_138286 | 148213 | ZnF-C2H2 | Found | hypothetical protein FLJ31526 | ATGGTGGCCGAACCCCCAGTTATTTGTTCTCATTTTGCCCAACACTTTTCA |
| LOC151162 | | AF055029 | 151162 | Other | Seed | hypothetical protein LOC151162 | GGAGATGGTGACGTCCCTTCCACTGTAGTTGCTGTCACAACCTTGACGTC |
| LOC152485 | NT_016606:89 | NM_178835 | 152485 | ZnF-C2H2 | Found | hypothetical protein LOC152485 | CAGAGAAAGGGTTCGAATGTGTTTTTTGCAACTTTGTCTGCAAGACGAAG |
| LOC168850 | NT_007933:4291 | NM_176814 | 166850 | ZnF-C2H2 | Found | hypothetical protein LOC168850 | GAAAGCCCTAAATCAACTAGTCCGTCGGCTGCAGGTGGCCAGCAAAAAAC |
| LOC169270 | NT_008060:14 | NM_173539 | 169270 | ZnF-AN1 | Found | hypothetical protein LOC169270 | CATTCATCATATCTATCAGAAGGGCACGTCCACCATCAGCACAATGAGATCTCA |
| LOC199692 | NT_011176:416 | AK074846 | 199692 | ZnF-C2H2 | Found | similar to Zinc finger protein 136 | AACCAGTGTGGACGAGCCTTGAGTTATCATCGCTCTTTTCCAGTACGTGAAAGGA |
| LOC201292 | NT_033292:8 | NM_173547 | 201292 | Structural | Found | hypothetical protein LOC201292 | CCCCAGGTCCCCTGGCACCGGTCCCAAGCACAGTTTGTCCACTGAGGAGGA |
| LOC201514 | NT_011104:374 | NM_173548 | 201514 | ZnF-C2H2 | Found | hypothetical protein LOC201514 | CCCAACAGGCAGAAGTGCTTTCAAGAAGTCAGCTCATATTAACCCCCGAAAAA |
| LOC220992 | NT_033985:129 | NM_145312 | 220992 | ZnF-C2H2 | Found | Zinc finger protein 93 (Zinc finger protein HTF34) | AGGCACACATGCAGTCGAGGATTACTGGTTTGAAACAAAGATGTCAGCCCTAAAG |
| LOC283248 | NT_033241:294 | NM_173587 | 283248 | Trp Cluster-Myb | Found | hypothetical protein LOC283248 | |
| LOC284346 | NT_011109:18 | NM_174945 | 284346 | ZnF-C2H2 | Found | hypothetical protein LOC284346 | TGGCACCGATGCTCCAGCTGCGGCCAGGCCTTTGGCCAGAGACGCTTACT |
| LOC285346 | NT_034534:55 | BC014381 | 285346 | Methyl-CpG-binding | Found | hypothetical protein LOC285346 | AATGACCGTAGCATGGCTTCTTTGGCAGGTAGGAACATGATGGAGAGTTCAGAGC |
| LOC286103 | NT_031818:174 | NM_178535 | 286103 | ZnF-C2H2 | Found | hypothetical protein LOC286103 | GTCTTTTGACCTCATCGCCCCCTCTAGAAGGCTGCTGCCATCGCTTAAAT |
| LOC51036 | | NM_015854 | 51036 | Other | Seed | retinoic acid receptor-beta associated open reading frame | CCAAAAATACATAAGTTATAACCAATTTAACAGACAGAAAGGCGCACAGA |
| LOC51042 | | NM_015871 | 51042 | ZnF-C2H2 | Seed | zinc finger protein | CGAGGTACTTCATCGATTCCACCAACCTGAAGACCCACTTCCGATCCAAA |
| LOC51045 | | NM_015877 | 51045 | ZnF-C2H2 | Seed | Kruppel-associated box protein | TGGCAAATCCTTTTGCTATCGTTCATATCTTAGGGAACATTATAGAATGC |
| LOC51058 | | NM_015911 | 51058 | ZnF-C2H2 | Seed | hypothetical protein | TTATGAGTGCACTGAGTGTGGGCGGACCTTCAGCGATATCTCCAACTTTG |
| LOC51123 | | NM_016096 | 51123 | ZnF-C2H2 | Seed | HSPC038 protein | GACACAAATGCCAGACCCTAAGACCTTCAAGCAGCACTTTGAGAGCAAGC |
| LOC51186 | | NM_016303 | 51186 | Other | Seed | pp21 homolog | AAACTTATAGTGATGCGTTGGAAGGTTAATCGAAACCATCCTTACCCCTA |
| LOC51193 | | NM_016331 | 51193 | ZnF-C2H2 | Seed | zinc finger protein ANC_2H01 | GGTAAATGAGCATGCATGTAAATTAATAGAGTTAAGTGATAAGTATAACA |
| LOC51270 | | NM_016521 | 51270 | E2F | Seed | E2F-like protein | ACCACCAACTCGGCTCAGAACTGTCAGAACTTACGGGTGGAAAGACAGAA |
| LOC51290 | | NM_016570 | 51290 | Other | Seed | CDA14 | ATAATTTGCTGTCGTTTCAGACTTGGATCCTATAAACCTGTCAATTCTGT |
| LOC51333 | NT_024802:6 | NM_016643 | 51333 | ZnF-C2H2 | Found | mesenchymal stem cell protein DSC43 | AGCCGTACGCGTGCCCGGACTGCGGACGCGCCTTTGGCGGCAGCTCGTGC |
| LOC55893 | | NM_018660 | 55893 | ZnF-C2H2 | Seed | papillomavirus regulatory factor PRF-1 | GACACAGTGGACTCTGATCAGTTCAAGCGGGAGGAGGATTTCTACTACAC |
| LOC56270 | | NM_019613 | 56270 | Other | Seed | hypothetical protein 628 | GAGTGCATCCGAGATGTCTACGCGCAGTTTCTAGAGATGACCGATGACAA |
| LOC56930 | | AL365410 | 56930 | Other | Seed | hypothetical protein from EUROIMAGE 1669387 | TTTGCCAAATAAGACGGGATAGTTTATGGAGTTTTCTGAGGCGCATTGAA |
| LOC57209 | | AJ245587 | 57209 | ZnF-C2H2 | Seed | Kruppel-type zinc finger protein | TTAAAACATCAAATAGTACACATGGGGGGAAAGTCTTATGATTACAATGA |
| LOC57801 | | NM_021170 | 57801 | bHLH | Seed | hairy and enhancer of split 4 (Drosophila) | TATTAACGAGAGCCTCGCTCAGCTCAAAACCCTCATCCTGGACGCCCTCA |
| LOC58500 | | X16282 | 58500 | ZnF-C2H2 | Seed | zinc finger protein (clone 647) | CACGAATGTCTTGAGTGTCGGAAAGCCTTCACTCAACTCTCACATCTCAT |
| LOC65243 | | NM_023070 | 65243 | ZnF-C2H2 | Seed | hypothetical protein | GGAAAAGCGTTTTTCCAGATTAGACACCTTAGGCAACATGAGATTATTCA |
| LOC86614 | | NM_033108 | 86614 | Heat shock | Seed | Heat shock transcription factor 2-like | CAGCTGCCCCTCATTCCAGGCTAGCTCTTCAACCATCACCACTGGACAAA |
| LOC90322 | | AK001357 | 90322 | ZnF-C2H2 | Seed | similar to KRAB zinc finger protein KR18 | AAAGGATGGCCCCCAAAGTACAGCACGTGGGAGCCAGAAGAGCACATCTT |
| LOC90462 | | AK027873 | 90462 | ZnF-C2H2 | Seed | similar to Zinc finger protein 84 (Zinc finger protein HPF2) | AAATATTTAATTCAAGCATAAACATTGTTCATGTAGGACTGCGATCCCAT |
| LOC90589 | NT_011176:506 | NM_145233 | 90589 | bZIP | Found | similar to Zinc finger protein 20 (Zinc finger protein KOX13) | AAGAAAACTCCCCGAGTAAAATCATGTGGAGAAGTCAGCGTGGGTCATGC |
| LOC90987 | | AK000435 | 90987 | ZnF-C2H2 | Seed | similar to ZINC FINGER PROTEIN 184 | GTTCACAGCTCACACCACCTCAGCAGACTCGTGTTGGAGAGAAACCTGCT |
| LOC91120 | | NM_033196 | 91120 | ZnF-C2H2 | Seed | similar to ZINC FINGER PROTEIN 85 (ZINC FINGER PROTEIN HPF4) (HTF1) (H. sapiens) | GTATAAAAAATGTGGGGAAGCTTTTAATCACTGCTCAAACCTTACTACGT |
| LOC91464 | NT_011520:1976 | AK025181 | 91464 | Homeobox | Found | hypothetical protein LOC91464 | AGGTCTTCCCATCCATCAAACTTGCATCCCTGTGCTATGCATCCTTCCAC |
| LOC91614 | | AJ245600 | 91614 | Other | Seed | novel 58.3 KDA protein | GAACTCTACATAAAATTGTAAGTGTTAAGCTTATGGCCATACAGAACGGA |
| LOC91661 | NT_011148:42 | NM_138372 | 91661 | ZnF-C2H2 | Found | hypothetical protein BC001610 | |
| LW-1 | | NM_016153 | 51402 | Heat shock | Seed | LW-1 | CTTCCGCCAGCTAAACTTGTATGGCTTCCGAAAACGGCGTCAATGCACTT |
| LYL1 | | NM_005583 | 4066 | bHLH | Seed | lymphoblastic leukemia derived sequence 1 | CCCTTCCTCAACAGTGTCTACATTGGGCCAGCAGGACCTTTTAGCATCTT |
| LZLP | | NM_013344 | 29932 | bZIP | Seed | leucine zipper-like protein | TGCAGATAAACTTTTAAAGATCTCAACCTGTGGACGGGAAATGTGGGGTT |
| LZTR1 | | NM_006767 | 8216 | ZnF-BTB/POZ | Seed | leucine-zipper-like transcriptional regulator, 1 | ACCAGCCAGTGGACATTGGCACATCTCTGATCCAGGATATGAAGGCATAC |
| LZTS1 | | NM_021020 | 11178 | bZIP | Seed | leucine zipper, putative tumor suppressor 1 | GAGAAGGAGAAGGTGATTCAGTACCAGAAACAGCTGCAGCAGAGCTACGT |
| M96 | | NM_007358 | 22823 | ZnF-PHD | Seed | likely ortholog of mouse metal response element binding transcription factor 2 | AGGTAGAATAGCATGTGGCGAAAAATACCGAGTTTTGGCACGTCGGGTGA |
| MAD | | NM_002357 | 4084 | bHLH | Seed | MAX dimerization protein 1 | GCCACTGGGACCCGAATCAAGTCGACACACTACGTTGAGTTTATTAACAA |
| MADH1 | | NM_005900 | 4086 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 1 (Drosophila) | GATTTGAGACAGTCTATGAGCTTACAAAAATGTGTACTATACGTATGAGC |
| MADH2 | | NM_005901 | 4087 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 2 (Drosophila) | GGCTCAGTCTGTTAATCAGGGTTTTGAAGCCGTCTATCAGCTAACTAGAA |
| MADH3 | | NM_005902 | 4088 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 3 (Drosophila) | TGACAGCGCTATTTTTGTCCAGTCTCCCAACTGTAACCAGCGCTATGGCT |
| MADH4 | | NM_005359 | 4089 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 4 (Drosophila) | AGCTCCTAGACGAAGTACTTCATACCATGCCGATTGCAGACCCACAACCT |
| MADH5 | | NM_005903 | 4090 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 5 (Drosophila) | TCAAATGTTAATCGTAATTCGACAATTGAAAACACTAGGCGACATATTGG |
| MADH6 | | NM_005585 | 4091 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 6 (Drosophila) | TGGATCTGTCCGATTCCACATTGTCTTACACTGAAACGGAGGCTACCAAC |
| MADH7 | | NM_005904 | 4092 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 7 (Drosophila) | TTGGTACACAAGGTGTTCCCCGGTTTCTCCATCAAGGCTTTCGACTACGA |
| MADH9 | | NM_005905 | 4093 | Dwarfin | Seed | MAD, mothers against decapentaplegic homolog 9 (Drosophila) | AGAGAGTCCCTATCAACACTCAGACTTTCGACCAGTTTGTTACGAGGAGC |
| MAF | | NM_005360 | 4094 | bZIP | Seed | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | GGATACGCCACATTTTGGAAGCCCCAGCATCGTGTACTTACCAGTGTGTT |
| MAFB | | NM_005461 | 9935 | bZIP | Seed | v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) | TCTTGCAGGTATAAACGCGTCCAGCAGAAGCACCACCTGGAGAATGAGAA |
| MAFF | | NM_012323 | 23764 | bZIP | Seed | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian) | ATGTCTGTGGATCCCCTATCCAGCAAAGCTCTAAAGATCAAGCGAGAGCT |
| MAFG | | NM_002359 | 4097 | bZIP | Seed | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian) | GGCCGCCACCAGCGTCATCACAATAGTAAAGTCCAAGACGGATGCCCGAT |
| MAFK | | NM_002360 | 7975 | bZIP | Seed | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) | ATGACGACTAATCCCAAACCGAATAAGGCATTAAAGGTCAAGAAGGAGGC |
| MAPK8IP1 | | NM_005456 | 9479 | Other | Seed | mitogen-activated protein kinase 8 interacting protein 1 | AGGTTCCCTATCACAAGGGCAATGACGTCCTCTGTGCTGCTATGCAAAAG |
| MAX | | NM_002382 | 4149 | bHLH | Seed | MAX protein | AGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCA |
| MAZ | | NM_002383 | 4150 | ZnF-C2H2 | Seed | MYC-associated zinc finger protein (purine-binding transcription factor) | TGTCACGTGTGTGGCAAGATGCTGAGCTCGGCTTATATTTCGGACCACAT |
| MBD1 | | NM_002384 | 4152 | Methyl-CpG-binding | Seed | methyl-CpG binding domain protein 1 | GGCTGTTCTGCAAGTGTGAACGGAGACGCTGCCTCCGGATTGTGGAAAGG |
| MBD2 | | NM_003927 | 8932 | Methyl-CpG-binding | Seed | methyl-CpG binding domain protein 2 | GGCTTTTTCTTCCCTTGGGCATGAGTCAGATACACAAGGACCCTTCAGGT |
| MBD4 | | NM_003925 | 8930 | Methyl-CpG-binding | Seed | methyl-CpG binding domain protein 4 | ATGGCAACGACTCTTACCGAATTTTTTGTGTCAATGAGTGGAAGCAGGTG |
| MBNL2 | | NM_005757 | 10150 | ZnF-C3H | Seed | muscleblind-like 2 (Drosophila) | GTGACAACACCGTAACCGTTTGTATGGATTACATAAAGGGGCGTTGCATG |
| MDS032 | | NM_018467 | 55850 | Other | Seed | uncharacterized hematopoietic stem/progenitor cells protein MDS032 | ATCTTCATTAGCATGATCCTCTTCATTCGAATCATGCCTAAACTCAAATA |
| MDS1 | | NM_004991 | 4197 | Other | Seed | myelodysplasia syndrome 1 | CTTCCAAGGTCTCGGAGGGTAAGCGTTCACTCTTGGTTGTATTTGGGGAA |
| MECP2 | | NM_004992 | 4204 | Methyl-CpG-binding | Seed | methyl CpG binding protein 2 (Rett syndrome) | GAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCATC |
| MED6 | | NM_005466 | 10001 | Co-activator | Seed | mediator of RNA polymerase II transcription, subunit 6 homolog (yeast) | GGGATCAGTTATAAACTCTAGAGTGCTTACTGCAGTGCATGGTATTCAGT |
| MEF2A | | NM_005587 | 4205 | Beta-scaffold-MADS | Seed | MADS box transcription enhancer factor 2, polypeptide A (myocyte enhancer factor 2A) | GAGGGCAGTTATCTCAGGGTTCCAATTTATCCATTAATACCAACCAAAAC |
| MEF2B | | NM_005919 | 4207 | Beta-scaffold-MADS | Seed | MADS box transcription enhancer factor 2, polypeptide B (myocyte enhancer factor 2B) | ATGGGGAGGAAAAAAATCCAGATCTCCCGCATCCTGGACCAAAGGAATCG |
| MEF2C | | NM_002397 | 4208 | Beta-scaffold-MADS | Seed | MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C) | TTTCAACAACATATGGTACCGAGTACTCTCTGAGTAGTGCAGACCTGTCA |
| MEF2D | | NM_005920 | 4209 | Beta-scaffold-MADS | Seed | MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D) | AGCGTGCTATGTGACTGCGAGATCGCACTCATCATCTTCAACCACTCCAA |
| MEFV | | NM_000243 | 4210 | Co-activator | Seed | Mediterranean fever (pyrin) | AGCAGGTGTACTACTTCCTGGAACAGCAGGAGCATTTCTTTGTGGCCTCA |
| MEIS1 | | NM_002398 | 4211 | Homeobox | Seed | Meis1, myeloid ecotropic viral integration site 1 homolog (mouse) | CATGATAGACCAGTCCAACCGAGCAGTAAGTCAAGGAACACCTTATAATC |
| MEIS2 | | NM_020149 | 4212 | Homeobox | Seed | Meis1, myeloid ecotropic viral integration site 1 homolog 2 (mouse) | GAGCTGGACAATTTGATGATACAAGCAATACAAGTACTAAGGTTTCATCT |
| MEIS3 | | U68385 | 4213 | Homeobox | Seed | Meis1, myeloid ecotropic viral integration site 1 homolog 3 (mouse) | CAGCATCAGTGGGGGATGAGTTTGGAACTCGGAAGGAGGAATGGCATTAT |
| MEOX1 | | NM_004527 | 4222 | Homeobox | Seed | mesenchyme homeobox 1 | TTGCCCATCATAACTACCTGACTCGGCTCCGCAGATATGAGATTGCGGTA |
| MEOX2 | | NM_005924 | 4223 | Homeobox | Seed | mesenchyme homeo box 2 (growth arrest-specific homeo box) | CATCATAATTATCTCACCAGACTGAGGCGATACGAGATAGCAGTGAATCT |
| MESP1 | NT_033276:146 | NM_018670 | 55897 | bHLH | Found | mesoderm posterior 1 | CTATATCGGCCACCTGTCGGCCGTGCTAGGCCTCAGCGAGGAGAGTCTCC |
| MESP2 | | AL360139 | 145873 | bHLH | Seed | mesoderm posterior 2 | AAATTGTATGGGTCTCTCTGTGTCTCCAGAGCCCTGTCTGTCGCTGGGAG |
| METTL3 | | NM_019852 | 56339 | Other | Seed | methyltransferase like 3 | GGCACTCGCAAGATTGAGTTATTTGGACGACCACACAATGTGCAACCCAA |
| MGA | | AB011090 | 23269 | bHLH | Seed | MAX gene associated | GATTCCAGGCGTTTTAGGGGGAAGGCTGCAGATACCATTCTAACCCCCAA |
| MGC10561 | NT_010664:55 | NM_032467 | 84733 | Structural | Found | hypothetical protein MGC10561 | GCATTGCTGGGCGTCTGGACATCTGTAGCTGTCGTTTGGTTTGATCTTGTTG |
| MGC10715 | NT_011387:237 | NM_024325 | 79175 | ZnF-C2H2 | Found | novel C2H2 type zinc finger protein | CCGGACCATAACCTGGAATCAAACTTTATTACAAACCCGAGGACCCTCTTAGGGA |
| MGC10772 | | NM_030567 | 80758 | Other | Seed | hypothetical protein MGC10772 | GGTGATGTCCCAGGGCACCTACACGTTCCTCACGTGCTTCGCCGGCTTCT |
| MGC11349 | | NM_025112 | 79364 | Other | Seed | hypothetical protein MGC11349 | CAAAATGAGTCCTCCCCATTTCCATGCAAGCCAGAACAGTTGGTTGTGTG |
| MGC12466 | NT_031730:24 | NM_033213 | 93474 | ZnF-C2H2 | Found | hypothetical protein MGC12466 | ACATGGTAACACACACTAGTAATGGGCCTTATAAGGGTCCAGTGTATGAGAAGCC |
| MGC13105 | | AL389937 | 84527 | ZnF-C2H2 | Seed | hypothetical protein MGC13105 | GAACGGCCCTTTGAATGTCAGGAATGTGGGAAAGCCTTTACTCGGTCCAC |
| MGC13138 | NT_024802:30 | NM_033410 | 92595 | ZnF-C2H2 | Found | hypothetical protein MGC13138 | GTGGCGAAATGTCAGACACAAACGGACCCAGCAGATTCCAGAAACAAGAA |
| MGC15631 | NT_011255:130 | NM_032753 | 84839 | Homeobox | Found | hypothetical protein MGC15631 | GTTCGAGGCCTCTCACTACCCGGATGTGTACAGCCGTGAGGAGCTGGCAG |
| MGC15716 | | NM_032370 | 84330 | Other | Seed | hypothetical protein MGC15716 | GGCTCACAGCAAACTGCACTACAAACCCAATCGCTACTTCAAGTGTGAGA |
| MGC16733 | | NM_033547 | 92105 | Other | Seed | hypothetical gene MGC16733 similar to CG12113 | AAGTGTCACAAAAGATGCAGAAGGCCTAGCTGCCAGAGATGTCCAGAAGA |
| MGC17986 | NT_011109:758 | NM_153608 | 163071 | ZnF-C2H2 | Found | hypothetical protein MGC17986 | TTACTCAGTGCGAGAACACCTCCAGAAATAACTCAATTCACGCCATGCAGATG |
| MGC20700 | | NM_021731 | 126321 | Other | Seed | hypothetical protein MGC20700 | GAACAGGAAGAGCTGGAGGGGACGTCACACACATGAGCCTTTTAGGAATA |
| MGC23143 | NT_011150:25 | NM_153219 | 147807 | ZnF-C2H2 | Found | hypothetical protein MGC23143 | CTCCTCCTGATCGATGATCAGGGTGTGCCCTATACGGTCTCTGAAGGTTC |
| MGC2508 | | NM_024327 | 79177 | ZnF-C2H2 | Seed | hypothetical protein MGC2508 | ATGGAGGACCCGAACCCTGAAGAGAACATGAAGCAGCAGGATTCACCCAA |
| MGC2629 | NT_034406:17 | NM_032522 | 84614 | ZnF-C2H2 | Found | hypothetical protein MGC2629 | TGAAGTTGACAGATTTAGCCCCTCCGGCAGTGTTGTTCCCTTGACAGAGAGA |
| MGC26707 | NT_011268:275 | NM_152791 | 148254 | ZnF-AN1 | Found | hypothetical protein MGC26707 | ATGTAGGACATCCTCCTGCAAATGAATTCATGTGCAGTGCTTCAGAAAAGTCACA |
| MGC26914 | NT_011176:562 | NM_144976 | 163050 | ZnF-MIZ | Found | hypothetical protein MGC26914 | TGTGGGAAAGCTTTCATTTATCACACAACCTTCGAATACCTGTGAAAATGAA |
| MGC27466 | NT_004852:316 | NM_152373 | 127396 | ZnF-C2H2 | Found | hypothetical protein MGC27466 | GAGCGAATCCACACGAGAGCTCTCCAGAATCTGACTACCCACTTGTTGATG |
| MGC30156 | NT_009759:4 | NM_152639 | 196512 | bZIP | Found | hypothetical protein MGC30156 | |
| MGC32104 | NT_011109:1338 | NM_144684 | 147657 | ZnF-C2H2 | Found | hypothetical protein MGC32104 | TGTCAAAACCCCCATTTTTAATAGGAATGATTTTGATGATTCTTCATTTCTCCCA |
| MGC33414 | NT_004782:145 | NM_173574 | 257101 | ZnF-C2H2 | Found | hypothetical protein MGC33414 | GCCAGCTCCACCGATGACAAGAAATTCACAGTCAAGTACCCACAGAACAAG |
| MGC34079 | NT_011104:269 | NM_152475 | 147687 | ZnF-C2H2 | Found | hypothetical protein MGC34079 | |
| MGC4054 | NT_011145:54 | NM_024341 | 79230 | ZnF-C2H2 | Found | hypothetical protein MGC4054 | GGCTTTCGGCACGAGGTCATCTCTTTCTTCGCACTATAGCATTCATACAGGGGAG |
| MGC41917 | NT_011104:193 | NM_153231 | 162972 | ZnF-C2H2 | Found | hypothetical protein MGC41917 | GCACTCCAGGGCATTACAAGAGTGGTTATCAGCAGATGTTCTCCATGAATGTG |
| MGC4400 | NT_011109:1258 | NM_032679 | 84765 | ZnF-C2H2 | Found | hypothetical protein MGC4400 | GGAACCCCGCCATTGTTAAACAAGAGTGAGCGCCTAGTGGGCAGAAATGTA |
| MGC45380 | NT_011192:45 | NM_133466 | 284406 | ZnF-C2H2 | Found | hypothetical protein MGC45380 | TTGAAAACCATGGCCTTAAGGGTCTCATTTTAAAAAATGATTGGGAATCCACAGG |
| MGC45408 | NT_011176:129 | NM_152289 | 93134 | ZnF-C2H2 | Found | hypothetical protein MGC45408 | |
| MGC45586 | NT_011192:107 | NM_152603 | 163081 | ZnF-C2H2 | Found | hypothetical protein MGC45586 | GAGAAACCTCATTGTCCATCAAAGAACTCACAAGGGAGAAAACATTGAAATGCAA |
| MGC45866 | | BC002881 | 90381 | Other | Seed | hypothetical protein MGC45866 | TCAGAAGTTAGTAAGAGTAAAGAGGGGTCTCCAAGTTGGAGTGCATGGCA |
| MGC4618 | NT_006111:171 | NM_032326 | 84286 | ZnF-PHD | Found | hypothetical protein MGC4618 | CTCTCGCTGGCCTTCGTGGGTGGCCTCCCACTAGCCTACCAGCAGACCTC |
| MGC4728 | NT_011104:181 | NM_198542 | 374928 | ZnF-C2H2 | Found | similar to hypothetical protein FLJ23233 | AATGTGGGAAATTTTTTCGCCACAGCTCCAGTCTTGTTAAACATCGAAGGATTCA |
| MGC48625 | NT_011148:24 | NM_182609 | 342926 | ZnF-C2H2 | Found | hypothetical protein MGC48625 | GCAGAGTGTTTCTATAAGAGATAGTGCACACCAGTATTTCATCCATGACAAGCCA |
| MGC5384 | NT_011109:1426 | NM_030972 | 81856 | ZnF-C2H2 | Found | hypothetical protein MGC5384 | |
| MHC2TA | | NM_000246 | 4261 | Other | Seed | MHC class II transactivator | TTCGCTCGCTGCATCCCTGCTCAGGCTAAGCTTGTACAATAACTGCATCT |
| MID1 | | NM_000381 | 4281 | Structural | Seed | midline 1 (Opitz/BBB syndrome) | ACCTTCACCGTGTGGAACAAGTGTCTGACGATTATCACTGGGCTCCCTAT |
| MID2 | NT_011651:146 | NM_012216 | 11043 | Structural | Found | midline 2 | ACTGCTTTCCAGTGTCCTACCTGCAGGTATGTTATCTCGCTGAACCACCGGG |
| MI-ER1 | | NM_020948 | 57708 | Other | Seed | mesoderm induction early response 1 | GCAGATATGGATACTAATGGTTATGAAACAGATAACCTTACCACTGACCC |
| MILD1 | | NM_031944 | 83881 | Homeobox | Seed | Mix1 homeobox-like 1 (Xenopus laevis) | TGAAGACATTGGTTCAAAGCTGGACTCATGGGAGGAACACATCTTTTCTG |
| MITF | | NM_000248 | 4286 | bHLH | Seed | microphthalmia-associated transcription factor | AGCATCCGTGGACTATATCCGAAAGTTGCAACGAGAACAGCAACGCGCAA |
| MIZ1 | | NM_004671 | 9063 | ZnF-MIZ | Seed | Msx-interacting-zinc finger | GAAGAATTACTCTATGTCTGTATATCTTGTACGGCAGCTTACATCAGCCA |
| MLL | | NM_005933 | 4297 | AF-4 | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) | TGCCATGCGTAAGATCTACCGAGGAGAGGAACTCACTTACGACTATAAGT |
| MLL2 | | NM_003482 | 8085 | AF-4 | Seed | myeloid/lymphoid or mixed-lineage leukemia 2 | CATGTTCCGAATAAACAATGAACATGTGATTGATGCTACGTTGACCGGCG |
| MLL3 | NT_007914:1255 | NM_021230 | 58508 | Structural | Found | myeloid/lymphoid or mixed lineage leukemia 3 | CTCGGATTCAGGGGCTGGGCCTGTATGCTGCTCGAGACATTGAGAAACAC |
| MLL4 | | NM_014727 | 9757 | Structural | Seed | myeloid/lymphoid or mixed-lineage leukemia 4 | AGAAGTTCTACGATGGGAAGGGCATCGGGTGCTATATGTTCCGCATGGAT |
| MLLT1 | | NM_005934 | 4298 | AF-4 | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 1 | AGCAGATTGTGAATCTGATCGAGGAGACTGGCCACTTCAATGTCACCAAC |
| MLLT10 | | NM_004641 | 8028 | ZnF-PHD | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to 10 | AAGTCTCTCGCCACGATCCCCTGTAAGCAGCTTACAGATTCGCTATGATC |
| MLLT2 | | NM_005935 | 4299 | AF-4 | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to 2 | ACATAGCAATAAAGTATTCTCGTACTCTTAATAAACACTTCGAGAGTTCT |
| MLLT3 | | NM_004529 | 4300 | AF-4 | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to 3 | GATCTTTGCTCGCTGGACAAAACCACAGTCCGTAAACTACAGAGTTACCT |
| MLLT4 | | NM_005936 | 4301 | Structural | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to 4 | TAGACCTGAAGCCTACCCCATTCCCACTCAGACGTACACCAGAGAGTATT |
| MLLT6 | | NM_005937 | 4302 | ZnF-PHD | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to 6 | AGGTGGACAACGTCAAGTACTGCGGCTACTGCAAATACCACTTCAGCAAG |
| MLLT7 | | NM_005938 | 4303 | Forkhead | Seed | myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog); translocated to, 7 | CTGACACTTGCCCAGATTTACGAGTGGATGGTCCGTACTGTACCCTACTT |
| MNAT1 | | NM_002431 | 4331 | ZnF-Other | Seed | menage a trois 1 (CAK assembly factor) | GGCTCAGCATAAAGATAGATCTACCCAATTAGAAATGCAACTTGAGAAAC |
| MNDA | | NM_002432 | 4332 | Other | Seed | myeloid cell nuclear differentiation antigen | GGAACAATGGTGTATGGGTTGTTTATGTTACAAAAGAAAAGCGTACACAA |
| MNT | | NM_020310 | 4335 | bHLH | Seed | MAX binding protein | AGGAGAAGGAATATGAGCATGAAATGGAGCGGCTGGCACGTGAGAAGATT |
| MONDOA | | NM_014938 | 22877 | bHLH | Seed | Mlx interactor | CGGGACTGATTCCTTTGCAGCCTAACCTGGACTTCATGGACACCTTTGAG |
| MORF | | NM_012330 | 23522 | ZnF-PHD | Seed | monocytic leukemia zinc finger protein-related facto | CACAACTGAGAACTACGAAAACCCAAGCAGCTACGATTCTACTATGGGAG |
| MORF4 | | NM_006792 | 10934 | Structural | Seed | mortality factor 4 | GAGACTCCCCAGCCTCCTCGAAAGAAAAGGGCCCAGGTAGATCCTACTGT |
| MORF4L1 | | NM_006791 | 10933 | Structural | Seed | mortality factor 4 like 1 | TCACTTATAAATGGCGCCGAAGCAGGACCCGAAGCCTAAATTCCAGGAGG |
| MORF4L2 | | NM_012286 | 9643 | Structural | Seed | mortality factor 4 like 2 | AGAAATCGCAGGGAAATGTTGATAATAAGGAATATGCGGTTAATGAAGTT |
| MRF-1 | | BC032488 | 10865 | Structural | Seed | modulator recognition factor I | TGGTACTCTGCTGCTCAAAGCAGCTTTTCAGCCTTCCCCATCTGTTCTGC |
| MRF2 | | BC015120 | 84159 | Structural | Seed | modulator recognition factor 2 | CCCCTGCCTCCAATCAAACCTCGGAAACAGGAGAACAGTTCACAGGAAAA |
| MRG2 | | AL359938 | 56917 | Homeobox | Seed | likely ortholog of mouse myeloid ecotropic viral integration site-related gene 2 | AGGATCAGTGGGGATGAGTTTGAACTTGGAAGGAGAATGGCATTATCTAT |
| M-RIP | NT_030843:4 | NM_015134 | 23164 | bZIP | Found | myosin phosphatase-Rho interacting protein | |
| MSC | | NM_005098 | 9242 | bHLH | Seed | musculin (activated B-cell factor-1) | TGGAACCACCGCTTAAATCGGACTGGAACTCACTTGATGGGATTATTCGT |
| MSX1 | | NM_002448 | 4487 | Homeobox | Seed | msh (Drosophila) homeo box homolog 1 (formerly homeo box 7) | AAAGAGACTACAAGAGGCAGAGCTGGAGAAGCTGAAGATGGCCGCCAAGC |
| MSX2 | | NM_002449 | 4488 | Homeobox | Seed | msh (Drosophila) homeo box homolog 2 | CTGAAAATGGCTGCAAAACCTATGCTGCCCTCCAGCTTCAGTCTCCCTTT |
| MTA1 | | NM_004689 | 9112 | ZnF-Other | Seed | metastasis associated 1 | TCCCCCTAACATGCAGTGTCGTCTCTGCGCATCTTGTTGGACATATTGGA |
| MTA1L1 | | NM_004739 | 9219 | ZnF-Other | Seed | metastasis-associated 1-like 1 | AAAGCAGAGTGCTCCATTCGACTTCCTAAGGCCGCCAAGACTCCATTGAA |
| MTF1 | | NM_005955 | 4520 | ZnF-C2H2 | Seed | metal-regulatory transcription factor 1 | GCACATTCGAACTCATACAGGGGAAAAGCCATTTCGGTGCGATCACGATG |
| MXD3 | | NM_031300 | 83463 | bHLH | Seed | MAX dimerization protein 3 | AGTCTGGACTCCTCAGGCCTCTCCTCTGAGCGCTCAGACTCAGACCAAGG |
| MXD4 | | NM_006454 | 10608 | bHLH | Seed | MAX dimerization protein 4 | TCACACAACGAGCTAGAAAAGCACAGACGAGCCAAACTCAGGCTGTACCT |
| MXI1 | | NM_005962 | 4601 | bHLH | Seed | MAX interacting protein 1 | GAACGAATACGAATGGACAGCATTGGATCAACTATTTCTTCAGATCGTTC |
| MYB | | NM_005375 | 4602 | Trp cluster-Myb | Seed | v-myb myeloblastosis viral oncogene homolog (avian) | ACTGTTCACGCAGACCTCGCCTGTGCGAGATGCACCGAATATTCTTACAA |
| MYBBP1A | | NM_014520 | 10514 | Co-repressor | Seed | MYB binding protein (P160) 1a | CTATGGCCTATTGAAGCACAGTCGCGAGTTCTTGGACTTCTTCTGGGACA |
| MYBL1 | | X66087 | 4603 | Trp cluster-Myb | Seed | v-myb myeloblastosis viral oncogene homolog (avian)-like 1 | AAATAGATTTACTACATCCTTATTAATGATACCATTATTGGAAATACATG |
| MYBL2 | | NM_002466 | 4605 | Trp cluster-Myb | Seed | v-myb myeloblastosis viral oncogene homolog (avian)-like 2 | TGAAGCTGATGATGTCCACACTGCCCAAGTCTCTATCCTTGCCGACAACT |
| MYC | | NM_002467 | 4609 | bHLH | Seed | v-myc myelocytomatosis viral oncogene homolog (avian) | TGCGGAAACGACGAGAACAGTTGAAACACAAACTTGAACAGCTACGGAAC |
| MYCBP | | NM_012333 | 26292 | Co-activator | Seed | c-myc binding protein | AGAAATAGAGCTCGTTCGCCTAGAACTGGCCGAAATGAAAGAGAAGTATG |
| MYCL1 | | M19720 | 4610 | bHLH | Seed | v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) | AGGTCAGGCATTGGCTCTTCTCAAGCTCTTGGGCCATCTCCGCCTCTCTT |
| MYCL2 | | NM_005377 | 4611 | bHLH | Seed | v-myc myelocytomatosis viral oncogene homolog 2 (avian) | TGCCAGCGACGGCAATTGCAGAAAAGAATTGAGTACCTCAGTAGCTACTG |
| MYCLK1 | | M64786 | 4612 | bHLH | Seed | v-myc myelocytomatosis viral oncogene homolog (avian)-like 1 | TCTTTACCCAGATCGGCCTGTGAGTAGGCGTGGTGGTAAATTTACTTCCA |
| MYCN | | NM_005378 | 4613 | bHLH | Seed | v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) | GTGCCGGAGTTGGTAAAGAATGAGAAGGCCGCCAAGGTGGTCATTTTGAA |
| MYF5 | | NM_005593 | 4617 | bHLH | Seed | myogenic factor 5 | GATTCACAGCCTCGAACTCCAGGGGCTTCTAGTTCCAGGCTTATCTATCA |
| MYF6 | | NM_002469 | 4618 | bHLH | Seed | myogenic factor 6 (herculin) | GAGGAGCAAGTATTGATTCGTCAGCCTCGAGTAGCCTTCGATGCCTTTCT |
| MYNN | NT_010840:25 | NM_018657 | 55892 | ZnF-BTB/POZ | Found | myoneurin | GGCTTTCAACTCCCCGAAAACAGGGCAGAATAAAACAGTGCAATATCCCAGTGA |
| MYOD1 | | NM_002478 | 4654 | bHLH | Seed | myogenic factor 3 | AGCAAAGTAAATGAGGCCTTTGAGACACTCAAGCGCTGCACGTCGAGCAA |
| MYOG | | NM_002479 | 4656 | bHLH | Seed | myogenin (myogenic factor 4) | ATGTGTCTGTGGCCTTCCCAGATGAAACCATGCCCAACTGAGATTGTCTT |
| MYT1 | | NM_004535 | 4661 | ZnF-Other | Seed | myelin transcription factor 1 | AGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGAC |
| MYT1L | | AF036943 | 23040 | ZnF-Other | Seed | myelin transcription factor 1-like | ATGCTTACGTGACTACTTTGACGGAAATGTATACAAATCAAGATCGTTAT |
| MYT2 | | NM_003871 | 8827 | Other | Seed | myelin transcription factor 2 | CTGCGTTAGAGCGTAATGTGATACGAAATATTGCTAAAACTTGGCGTGAA |
| NAB1 | | NM_005966 | 4664 | Co-repressor | Seed | NGFI-A binding protein 1 (EGR1 binding protein 1) | AAGAGCACAGTCCTAACGGCTTGACTTCCGATAACTCAGATGGACAAGGT |
| NAB2 | | NM_005967 | 4665 | Co-repressor | Seed | NGFI-A binding protein 2 (EGR1 binding protein 2) | CAGTTCTGCATGAGGGACAACACGCTCTTATTACGGAGAGTGGAGCTCTT |
| NCALD | | NM_032041 | 83988 | Other | Seed | neurocalcin delta | AATTTTGAATGCATTTCCAGAGTGGCCATGCCTAGAGGGCAGATGCAGAG |
| NCOA1 | | NM_003743 | 8648 | Co-activator | Seed | nuclear receptor coactivator 1 | CTCATAGCTCATTGACAGCACGGCATAAAATTCTACACCGGCTCTTACAG |
| NCOA2 | | NM_006540 | 10499 | Co-activator | Seed | nuclear receptor coactivator 2 | GAATGCACTACTTCGCTATTTGCTAGATAAAGATGATACTAAAGATATTG |
| NCOA3 | | NM_006534 | 8202 | Co-activator | Seed | nuclear receptor coactivator 3 | CATTGCCTCTTCGGTCTAATAGCATACCAGGTGCGAGACCAGTATTGCAA |
| NCOA4 | | NM_005437 | 8031 | Co-activator | Seed | nuclear receptor coactivator 4 | TGCAGCTTAAAGTTGATAAAGAGAAGTGGTTATATCGAACTCCTCTACAG |
| NCOA6 | | NM_014071 | 23054 | Co-activator | Seed | nuclear receptor coactivator 6 | ATCCCTTGTGCATCCCGAATTGAGTGAGGTCAGTTCTAACGTTGCACCAA |
| NCOR1 | | NM_006311 | 9611 | Other | Seed | nuclear receptor Co-repressor 1 | AGAGTTAATACAGAGTATGGATCGTGTAGATCGAGAAATTGCAAAAGTAG |
| NCOR2 | | NM_006312 | 9612 | Other | Seed | nuclear receptor Co-repressor 2 | GGAGGCCATAATTAGAAAGGCACTCATGGGTAAATATGACCAGTGGGAAG |
| NCYM | | NM_006316 | 10408 | Other | Seed | DNA-binding transcriptional activator | TTGCTCCTGTGTAATTACGAAAGAAGGCTAGTCCGAAGGTGCAAAATAGC |
| NEUD4 | | NM_004647 | 8193 | ZnF-PHD | Seed | Neuro-d4 (rat) homolog | CTGGAGGACCGAGACAAGCCGTATGTCTGTGATAAGTTTTACAAAGAATT |
| NEUROD1 | | NM_002500 | 4760 | bHLH | Seed | neurogenic differentiation 1 | ACATCATGAGCGAGTCATGAGTGCCCAGCTCAATGCCATATTTCATGATT |
| NEUROD2 | | NM_006160 | 4761 | bHLH | Seed | neurogenic differentiation 2 | ATCTCTTGTCTTACGATATGCACCTTCACCACGACCGGGGCCCCATGTAC |
| NEUROD4 | | NM_021191 | 58158 | bHLH | Seed | neurogenic differentiation 4 | CTGGTACCCCCCGTTATGATGTTCCTATAGACATGTCCTATGATTCCTAC |
| NEUROD6 | | NM_022728 | 63974 | bHLH | Seed | neurogenic differentiation 6 | CACTTCCCTTACGACTTACATCTGCGCAGCCAATCTCTCACAATGCAAGA |
| NEUROG1 | | NM_006161 | 4762 | bHLH | Seed | neurogenin 1 | CTGCCCAAAGACTTGCTCCACACAACGCCCTGTTTCATTCCTTACCACTA |
| NEUROG2 | | AF303002 | 63973 | bHLH | Seed | neurogenin 2 | CCGAGACGGTGCAGCGCATCAAGAAGACCCGTAGACTGAAGGCCAACAAC |
| NEUROG3 | | NM_020999 | 50674 | bHLH | Seed | neurogenin 3 | CTTCCGCCTGCTTGAGCCCAGGCAGTCTGGCTTTCTCAGATTTTCTGTGA |
| NFAT5 | | NM_006599 | 10725 | Beta-scaffold-RHD | Seed | nuclear factor of activated T-cells 5, tonicity-responsive | TTATTTGGCATTCAAAATAACTGTAGTCAGCTTTTAACCTCTGGACCAGC |
| NFATC1 | | NM_006162 | 4772 | Beta-scaffold-RHD | Seed | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 | AGTCCTCGCATCGAGATAACCTCGTGCTTGGGCCTGTACCACAACAATAA |
| NFATC2 | | NM_012340 | 4773 | Beta-scaffold-RHD | Seed | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 | AAAGAGCCGCCAAAAACGGACCCCCGGTCAGTGACCAAAAGGAAGTATTA |
| NFATC3 | | NM_004555 | 4775 | Beta-scaffold-RHD | Seed | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 | ATCACTTTAGATGATGACCAATTTATATCTGACTTGGAACACCAGCCATC |
| NFATC4 | | NM_004554 | 4776 | Beta-scaffold-RHD | Seed | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 | ACAGTGTCCCTATCCAGGGTATCACGCTGGAGGAAGTGAGTGAGATCATT |
| NFE2 | | NM_006163 | 4778 | bZIP | Seed | nuclear factor (erythroid-derived 2), 45kD | TGTCAACTTGCCGGTAGATGACTTTAATGAGCTATTGGCAAGGTACCCGC |
| NFE2L1 | | NM_003204 | 4779 | bZIP | Seed | nuclear factor (erythroid-derived 2)-like 1 | ACCGAGCCCGAGCCATGAAGATCCCTTTCACCAATGACAAAATCATCAAC |
| NFE2L2 | | NM_006164 | 4780 | bZIP | Seed | nuclear factor (erythroid-derived 2)-like 2 | GAAGCTCAACTTGCATTAATTCGGGATATACGTAGGAGGGGTAAGAATAA |
| NFE2L3 | | NM_004289 | 9603 | bZIP | Seed | nuclear factor (erythroid-derived 2)-like 3 | AGGATTTCTTTCACCGGTTGACAATCATATGAGGAATCTAACAAGCCAAG |
| NFIA | | AB037860 | 4774 | Beta-scaffold-CCAAT | Seed | nuclear factor I/A | GGCAAAGTTGCGGAAAGATATCCGACCCGAATATCGAGAGGATTTTGTTC |
| NFIB | | NM_005596 | 4781 | Beta-scaffold-CCAAT | Seed | nuclear factor I/B | GAACTCGGGGGTCAATCTTCAGAGGTCTCTGTCTTCTCCACCAAGCAGCA |
| NFIC | | NM_005597 | 4782 | Beta-scaffold-CCAAT | Seed | nuclear factor I/C (CCAAT-binding transcription factor) | CTTCCAGGAGAGCTTTGTCACCTCCGGCGTGTTCAGCGTCACTGAGCTCA |
| NFIL3 | | NM_005384 | 4783 | bZIP | Seed | nuclear factor, interleukin 3 regulated | GCAGAGGTTGTCTCACTCAAGAGACTTATAGCCACACAACCAATCTCTGC |
| NFIX | | NM_002501 | 4784 | Beta-scaffold-CCAAT | Seed | nuclear factor I/X (CCAAT-binding transcription factor) | TTATCTGGCTTACTTTGTCCACACTCCGGAATCCGGACAATCAGATAGTT |
| NFKB1 | | NM_003998 | 4790 | Beta-scaffold-RHD | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105) | TCAAATATTAGAGCAACCTAAACAGAGAGGATTTCGTTTCCGTTATGTAT |
| NFKB2 | | NM_002502 | 4791 | Beta-scaffold-RHD | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) | GGGTACTGATGGAGGGAGGGGTAAAGGTAAGAGAAGCTGTGGAGGAAAAA |
| NFKBIA | | NM_020529 | 4792 | Co-repressor | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | AGGATGAGGAGAGCTATGACACAGAGTCAGAGTTCACGGAGTTCACAGAG |
| NFKBIB | | NM_002503 | 4793 | Co-activator | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta | ACGGCACTGCACTTGGCTGTGATTCATCAGCATGAACCCTTCCTGGATTT |
| NFKBIE | | NM_004556 | 4794 | Co-repressor | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon | CAGGACCTGACTGAGGAATCCCTTGTCCTTTTGCCCTTTGATGACCTGAA |
| NFKBIL1 | | NM_005007 | 4795 | Co-repressor | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 | CCTCTGCCATGGGAATAAAGAATAAGGATGGGGAGACCCCTGGCCAAATT |
| NFKBIL2 | | NM_013432 | 4796 | Co-repressor | Seed | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2 | AGGAAGAGCATCTTCCTTGCGGAGCAGAACCACCTTTACGAGGACCTATT |
| NFRKB | | NM_006165 | 4798 | Beta-scaffold-RHD | Seed | nuclear factor related to kappa B binding protein | AGTGAACAAAAGCGGCCCTTCCACAGTCTCAGAACCAGCTAAGTCTAGCT |
| NFX1 | | NM_002504 | 4799 | RFX | Seed | nuclear transcription factor, X-box binding 1 | AAGTCCGTTTGTCCTCCTACCACGCTGACAGGTGTGCTTGAAAGGGAAAT |
| NFYA | | NM_002505 | 4800 | Beta-scaffold-CCAAT | Seed | nuclear transcription factor Y, alpha | AAGAGCCTCTCTACGTGAATGCCAAACAATACCACCGTATTCTTAAGAGG |
| NFYB | | NM_006166 | 4801 | Beta-scaffold-CCAAT | Seed | nuclear transcription factor Y, beta | CAATAGCAAACGTGGCTAGGATAATGAAAAATGCCATACCTCAAACGGGA |
| NFYC | | NM_014223 | 4802 | Beta-scaffold-CCAAT | Seed | nuclear transcription factor Y, gamma | CTCAAGTTGTGCAGGGACAGATCCAGACACTTGCCACCAATGCTCAACAG |
| NHLH1 | NT_004982:183 | NM_005598 | 4807 | bHLH | Found | nescient helix loop helix 1 | |
| NHLH2 | | NM_005599 | 4808 | bHLH | Seed | nescient helix loop helix 2 | ATCGAGATCCTGCGCCTGGCCATCTGCTACATCTCCTATCTCAACCACGT |
| NKX2-2 | | NM_002509 | 4821 | Homeobox | Seed | NK2 transcription factor related, locus 2 (Drosophila) | ATGTCGCTGACCAACACAAAGACGGGGTTTTCGGTCAAGGACATCTTAGA |
| NKX2-3 | | NM_145285 | 53631 | Homeobox | Seed | NK2 transcription factor related, locus 3 (Drosophila) | ACGAGGAAGACGAGGGCGAGAAATTGTCCTATTTGAACTCACTAGCCGCA |
| NKX2-4 | | AF202037 | 4823 | Homeobox | Seed | NK2 transcription factor related, locus 4 (Drosophila) | GAGCTCACTCGCCTTCCCCCTTGGGACTCTTCCCCAGTCTCCAGGTTCAT |
| NKX2-5 | | NM_004387 | 1482 | Homeobox | Seed | NK2 transcription factor related, locus 5 (Drosophila) | ACAACAACTTCGTGAACTTCGGCGTCGGGGACTTGAATGCGGTTCAGAGC |
| NKX2-8 | | NM_014360 | 26257 | Homeobox | Seed | NK2 transcription factor related, locus 8 (Drosophila) | AGATCTGGTTCCAGAATCATCGCTACAAGCTGAAGCGTGCTCGCGCTCCA |
| NKX3-1 | | NM_006167 | 4824 | Homeobox | Seed | NK3 transcription factor related, locus 1 (Drosophila) | CTGGTCTCCGTGTATAACAGCTATCCTTACTACCCATACCTGTACTGCGT |
| NKX6-1 | | NM_006168 | 4825 | Homeobox | Seed | NK6 transcription factor related, locus 1 (Drosophila) | TACAATAAGCCTCTGGATCCCAACTCGGACGACGAGAAAATCACGCAGCT |
| NKX6-2 | | NM_177400 | 84504 | Homeobox | Seed | NK6 transcription factor related, locus 2 (Drosophila) | AACATGGCCGAGATGAAGACGTCGCTGTTCCCCTACGCGCTGCAGGGTCC |
| NMI | | NM_004688 | 9111 | Co-activator | Seed | N-myc (and STAT) interactor | AGAAGTAGATGTGGTCAAGTGTTCTCTAGGTCAACCTCACATAGCATACT |
| NPAS1 | | NM_002517 | 4861 | bHLH | Seed | neuronal PAS domain protein 1 | AAATTCCTCTACATCTCAGAGACAGTCTCCATCTATCTGGGTCTCTCACA |
| NPAS2 | | NM_002518 | 4862 | bHLH | Seed | neuronal PAS domain protein 2 | TGCTCAGAGAATCAAGTGTGATATCAACCCAAGGTCCAAAGCCAATGAGA |
| NPAS3 | NT_025892:1045 | NM_022123 | 64067 | bHLH | Found | neuronal PAS domain protein 3 | GCCGGAGAAAACTTCCGAATCCTCGGAGACATCCGACTCTGAGTCAGACTCTA |
| NR0B1 | | NM_000475 | 190 | NHR | Seed | nuclear receptor subfamily 0, group B, member 1 | AACATCAGTACCAAGGAGTACGCCTACCTCAAGGGGACCGTGCTCTTTAA |
| NR0B2 | | NM_021969 | 8431 | NHR | Seed | nuclear receptor subfamily 0, group B, member 2 | TGCTTGGGGACCTCTTCTTTCGCCCTATCATTGGAGATGTTGACATCGCT |
| NR1D1 | | NM_021724 | 9572 | NHR | Seed | nuclear receptor subfamily 1, group D, member 1 | AGAATGTTCTGCTGGCATGTCCTATGAACATGTACCCGCATGGACGCAGT |
| NR1D2 | | NM_005126 | 9975 | NHR | Seed | nuclear receptor subfamily 1, group D, member 2 | GTTTTAATGGTACGGTTCGCATCATTATTTGATGCAAAGGAACGTACTGT |
| NR1H2 | | NM_007121 | 7376 | NHR | Seed | nuclear receptor subfamily 1, group H, member 2 | CAGGCGCTACAACCACGAGACAGAGTGTATCACCTTCTTGAAGGACTTCA |
| NR1H3 | | NM_005693 | 10062 | NHR | Seed | nuclear receptor subfamily 1, group H, member 3 | ATCCACCATCCCCATGACCGACTGATGTTCCCACGGATGCTAATGAAACT |
| NR1H4 | | NM_005123 | 9971 | NHR | Seed | nuclear receptor subfamily 1, group H, member 4 | TTAAAAGGCTCCAGGGAATCCTGCATTCTAATTGGCAAGCCCTGTTTGCC |
| NR1I2 | | NM_003889 | 8856 | NHR | Seed | nuclear receptor subfamily 1, group I, member 2 | AGGAGCAATTCGCCATTACTCTGAAGTCCTACATTGAATGCAATCGGCCC |
| NR1I3 | | NM_005122 | 9970 | NHR | Seed | nuclear receptor subfamily 1, group I, member 3 | ACAGGCTACCACTTTAATGCGCTGACTTGTGAGGGCTGCAAGGGTTTCTT |
| NR2C1 | | NM_003297 | 7181 | NHR | Seed | nuclear receptor subfamily 2, group C, member 1 | TCAAAGGTCTCATTGGCAATATACGAATTGACAGTGTTATCCCACATATT |
| NR2C2 | | NM_003298 | 7182 | NHR | Seed | nuclear receptor subfamily 2, group C, member 2 | GCTATGAGTATGCATACCTTAAAGCTATAGTTCTCTTTAGCCCCGATCAT |
| NR2E1 | | NM_003269 | 7101 | NHR | Seed | nuclear receptor subfamily 2, group E, member 1 | TTTTCAAAAAAACCATCGGCAATGTGCCAATTACAAGACTGCTTTCAGAT |
| NR2E3 | | NM_016346 | 10002 | NHR | Seed | nuclear receptor subfamily 2, group E, member 3 | GATGCTGATGAGAATATTGATGTCACCAGCAATGACCCTGAGTTCCCCTC |
| NR2F1 | | NM_005654 | 7025 | NHR | Seed | nuclear receptor subfamily 2, group F, member 1 | TTACTGTCTGGGAGCAGCTTCAACTGGCCTTACATGTCCATCCAGTGCTC |
| NR2F2 | | NM_021005 | 7026 | NHR | Seed | nuclear receptor subfamily 2, group F, member 2 | ATATGTTACTGTCCGGCAGCAGTTTTAACTGGCCGTATATGGCAATTCAA |
| NR2F6 | | NM_005234 | 2063 | NHR | Seed | nuclear receptor subfamily 2, group F, member 6 | CATTGAGACACTGATCAGAGACATGCTGCTGTCGGGGAGTACCTTCAACT |
| NR3C1 | | NM_000176 | 2908 | NHR | Seed | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | TTTTTGGATAAGACCATGAGTATTGAATTCCCCGAGATGTTAGCTGAAAT |
| NR3C2 | | NM_000901 | 4306 | NHR | Seed | nuclear receptor subfamily 3, group C, member 2 | ACACGGCGACCTGTCGTCTAGAAGAAGTGATGGGTATCCGGTCTTAGAAT |
| NR4A1 | | NM_002135 | 3164 | NHR | Seed | nuclear receptor subfamily 4, group A, member 1 | TCTTCAAGCGCACAGTGCAGAAAAACGCCAAGTACATCTGCCTGGCTAAC |
| NR4A2 | | NM_006186 | 4929 | NHR | Seed | nuclear receptor subfamily 4, group A, member 2 | AAGACCACGTGACTTTCAACAATGGGGGGTTGAACCGCCCCAATTATTTG |
| NR4A3 | | NM_006981 | 8013 | NHR | Seed | nuclear receptor subfamily 4, group A, member 3 | CCTTCTCCTCCAATCTGCATGATGAATGCTCTTGTCCGAGCTTTAACAGA |
| NR5A1 | | NM_004959 | 2516 | NHR | Seed | nuclear receptor subfamily 5, group A, member 1 | AGCCTGGATTTGAAGTTCCTGAATAACCACATCCTGGTGAAAGACGCTCA |
| NR5A2 | | NM_003822 | 2494 | NHR | Seed | nuclear receptor subfamily 5, group A, member 2 | GTCTTTAAAGCACGGACTTACACCTATTGTGTCTCAATTTAAAATGGTGA |
| NR6A1 | | NM_001489 | 2649 | NHR | Seed | nuclear receptor subfamily 6, group A, member 1 | GCCGAACCGCTTTCCTGATCTCATGATGTGCTTACCTGAGATTCGATATA |
| NRF | | NM_017544 | 55922 | Other | Seed | transcription factor NRF | GCAGAAACGTATTGAAGTTAGAGTTGTCCGGCGGAAATTCAAGCATACAT |
| NRF1 | | NM_005011 | 4899 | bZIP | Seed | nuclear respiratory factor 1 | TCAGAATTGCCAACCACGGTCACCGTTGCCCAAGTGAATTATTCTGCCGT |
| NRIP1 | | NM_003489 | 8204 | Co-activator | Seed | nuclear receptor interacting protein 1 | ATTACATGCTTCAAAAAGGAGGCAATTCTGTTGCCAGTCGAGAAACACAA |
| NRL | | NM_006177 | 4901 | bZIP | Seed | neural retina leucine zipper | ATATGTCAATGACTTTGACTTGATGAAGTTTGAGGTAAAGCGGGAACCCT |
| NSEP1 | | NM_004559 | 4904 | Beta-scaffold-cold-shock | Seed | nuclease sensitive element binding protein 1 | GTAGACCAGTGAGGCAGAATATGTATCGGGGATATAGACCACGATTCCGC |
| NT_004350:88 | NT_004350:88 | na | | bHLH | Found | | |
| NT_004525:23 | NT_004525:23 | na | | bHLH | Found | | |
| NT_004525:75 | NT_004525:75 | na | | ZnF-C2H2 | Found | | |
| NT_005034:87 | NT_005034:87 | na | | ZnF-C2H2 | Found | | |
| NT_005370:482 | NT_005370:482 | na | | ZnF-C2H2 | Found | | |
| NT_005403:3 | NT_005403:3 | na | | Beta-scaffold-HMG | Found | | |
| NT_005403:380 | NT_005403:380 | na | | bHLH | Found | | TCTCAAAACCAACCAACCATCCAACCCTCAGCTCAGGCCTCACTTGCAAG |
| NT_005416:99 | NT_005416:99 | na | | ZnF-PHD | Found | | TGACTCATTGATGGCGTTTGCAAAAAGGATGTGGTTTTTTCCAATTCCAC |
| NT_005825:232 | NT_005825:232 | na | | ZnF-C2H2 | Found | | |
| NT_006519:17 | NT_006519:17 | na | | Beta-scaffold-HMG | Found | | |
| NT_007299:265 | NT_007299:265 | na | | Co-repressor | Found | | ACTGGCTAACACCCAGGGGGAGCTGCTGTCTATAGCAAAACAACTGGGAA |
| NT_007592:1641 | NT_007592:1641 | na | | ZnF-C2H2 | Found | | |
| NT_007592:1721 | NT_007592:1721 | na | | ZnF-C2H2 | Found | | |
| NT_007592:1743 | NT_007592:1743 | na | | ZnF-C2H2 | Found | | |
| NT_007592:1790 | NT_007592:1790 | na | | ZnF-C2H2 | Found | | |
| NT_007758:1041 | NT_007758:1041 | na | | Tubby | Found | | |
| NT_007758:1071 | NT_007758:1071 | na | | bHLH | Found | | |
| NT_007758:1316 | NT_007758:1316 | na | | bHLH | Found | | |
| NT_007758:175 | NT_007758:175 | na | | bHLH | Found | | |
| NT_007758:246 | NT_007758:246 | na | | bHLH | Found | | |
| NT_007758:49 | NT_007758:49 | na | | Trp Cluster-Ets | Found | | |
| NT_007758:68 | NT_007758:68 | na | | ZnF-C2H2 | Found | | |
| NT_007758:970 | NT_007758:970 | na | | ZnF-C2H2 | Found | | |
| NT_007819:476 | NT_007819:476 | na | | Forkhead | Found | | |
| NT_007819:839 | NT_007819:839 | na | | ZnF-C2H2 | Found | | |
| NT_007914:787 | NT_007914:787 | na | | ZnF-C2H2 | Found | | |
| NT_007914:794 | NT_007914:794 | na | | ZnF-C2H2 | Found | | CAGCCACTATGAGTCCAGGGAAGAGGAGAGTTGCCCTGAGCTTCAAGTTG |
| NT_007933:2507 | NT_007933:2507 | na | | ZnF-C2H2 | Found | | |
| NT_007933:56 | NT_007933:56 | na | | ZnF-C2H2 | Found | | |
| NT_008413:570 | NT_008413:570 | na | | bHLH | Found | | |
| NT_008413:741 | NT_008413:741 | na | | Co-repressor | Found | | GGAGGATGAGAAGGGAACTGCATGTACCTCAACAAGGCGTCGGTCAACAC |
| NT_008476:127 | NT_008476:127 | na | | ZnF-C2H2 | Found | | |
| NT_008705:419 | NT_008705:419 | na | | Trp Cluster-Ets | Found | | |
| NT_008818:505 | NT_008818:505 | na | | bHLH | Found | | TGCCATAGTCATGGTCAGGTGTTCTGTGGTTCACTGTCTACAACATGGCT |
| NT_009952:480 | NT_009952:480 | na | | Tubby | Found | | |
| NT_010404:40 | NT_010404:40 | na | | ZnF-C2H2 | Found | | TCCCCTCACCCCAGGCCTCCCTGGCCTCTCTGGAGTTGTTCAGTCTCTTC |
| NT_010478:365 | NT_010478:365 | na | | ZnF-C2H2 | Found | | TGCCTCTGTACCCTCCCCAAGCCATGCAAATCCATTCCAGACTGAGTTTC |
| NT_010552:854 | NT_010552:854 | na | | ZnF-C2H2 | Found | | |
| NT_010799:327 | NT_010799:327 | na | | E2F | Found | | |
| NT_010874:45 | NT_010874:45 | na | | ZnF-C2H2 | Found | | |
| NT_011104:174 | NT_011104:174 | na | | ZnF-C2H2 | Found | | |
| NT_011104:197 | NT_011104:197 | na | | ZnF-C2H2 | Found | | |
| NT_011104:361 | NT_011104:361 | na | | ZnF-C2H2 | Found | | |
| NT_011104:8 | NT_011104:8 | na | | ZnF-C2H2 | Found | | TCACCTGGAGTGTTTTCTTCTGCCGCAGGTTCAAGAGCCATATTCGAATA |
| NT_011104:89 | NT_011104:89 | na | | ZnF-C2H2 | Found | | TGCTTTCTGTGGAAGTATAGAGGGCCATGTGAGGGAAGCCGTTATCCAGA |
| NT_011109:1294 | NT_011109:1294 | na | | ZnF-C2H2 | Found | | |
| NT_011109:1299 | NT_011109:1299 | na | | ZnF-C2H2 | Found | | |
| NT_011109:1305 | NT_011109:1305 | na | | ZnF-C2H2 | Found | | |
| NT_011109:1313 | NT_011109:1313 | na | | ZnF-C2H2 | Found | | ACCCCCTCAATCACCTGTCTCACCTGCTAGGACACCTGCTGTGTAGCTCA |
| NT_011109:1351 | NT_011109:1351 | na | | ZnF-C2H2 | Found | | |
| NT_011109:1446 | NT_011109:1446 | na | | ZnF-C2H2 | Found | | |
| NT_011109:1451 | NT_011109:1451 | na | | ZnF-C2H2 | Found | | GCAAGAAATACCTGTGGTTCAGTCCATCCCACACCCCTGCTACAACAGCA |
| NT_011109:69 | NT_011109:69 | na | | ZnF-C2H2 | Found | | CTTCAAACTGCAGTCCTGGGATGCAGGGGTCAGTCCTAGGAAACTGCTTC |
| NT_011148:38 | NT_011148:38 | na | | ZnF-C2H2 | Found | | |
| NT_011148:51 | NT_011148:51 | na | | ZnF-C2H2 | Found | | |
| NT_011150:9 | NT_011150:9 | na | | ZnF-C2H2 | Found | | GGGGCCGATGGCGAACAGACTCGACTCTGCGTACAGGAGGTAGAAACACT |
| NT_011176:127 | NT_011176:127 | na | | ZnF-C2H2 | Found | | |
| NT_011176:150 | NT_011176:150 | na | | ZnF-C2H2 | Found | | |
| NT_011176:217 | NT_011176:217 | na | | Other | Found | | |
| NT_011176:469 | NT_011176:469 | na | | ZnF-C2H2 | Found | | |
| NT_011176:470 | NT_011176:470 | na | | ZnF-C2H2 | Found | | |
| NT_011192:122 | NT_011192:122 | na | | ZnF-C2H2 | Found | | |
| NT_011192:143 | NT_011192:143 | na | | ZnF-C2H2 | Found | | |
| NT_011192:34 | NT_011192:34 | na | | ZnF-C2H2 | Found | | |
| NT_011196:503 | NT_011196:503 | na | | ZnF-C2H2 | Found | | CAGCGTTGTTAGGCGAGCACAAGACTTCACAGGTGATGCTAGTTCACCAA |
| NT_011196:510 | NT_011196:510 | na | | ZnF-C2H2 | Found | | TTGGAACCTCTCATGGCACATGCTGAGCAGCCAGTAGTCTTCAGGACAAT |
| NT_011233:28 | NT_011233:28 | na | | ZnF-C2H2 | Found | | |
| NT_011250:146 | NT_011250:146 | na | | ZnF-C2H2 | Found | | |
| NT_011250:154 | NT_011250:154 | na | | ZnF-C2H2 | Found | | |
| NT_011295:596 | NT_011295:596 | na | | ZnF-C2H2 | Found | | CCTCTGTCGTTGTGGTCCATAGAGAGAGTGTGCCTATTGACTGTGGGGTG |
| NT_011333:191 | NT_011333:191 | na | | ZnF-BTB/POZ | Found | | |
| NT_011387:2065 | NT_011387:2065 | na | | ZnF-C2H2 | Found | | |
| NT_011520:1624 | NT_011520:1624 | na | | Other | Found | | |
| NT_011568:205 | NT_011568:205 | na | | ZnF-C2H2 | Found | | |
| NT_011568:220 | NT_011568:220 | na | | ZnF-C2H2 | Found | | |
| NT_011735:1 | NT_011735:1 | na | | ZnF-C2H2 | Found | | |
| NT_015805:343 | NT_015805:343 | na | | Forkhead | Found | | |
| NT_017568:1168 | NT_017568:1168 | na | | ZnF-PHD | Found | | |
| NT_017568:142 | NT_017568:142 | na | | Beta-scaffold-cold-shock | Found | | |
| NT_021937:180 | NT_021937:180 | na | | ZnF-C2H2 | Found | | ACCACCAGGGCAGCTCGTCCACATGATAGCCCTTCCATTCTCAAGCACAT |
| NT_022052:1 | NT_022052:1 | na | | ZnF-C2H2 | Found | | |
| NT_022135:81 | NT_022135:81 | na | | ZnF-BTB/POZ | Found | | |
| NT_022184:625 | NT_022184:625 | na | | Homeobox | Found | | AGGAACCCTTGTCCCCAGAACAGACATTTACACTCACCCACAGAGCTTCC |
| NT_022396:136 | NT_022396:136 | na | | ZnF-PHD | Found | | |
| NT_022665:49 | NT_022665:49 | na | | ZnF-C2H2 | Found | | |
| NT_023684:87 | NT_023684:87 | na | | bZIP | Found | | GCCAACAGACCCATCCCCAGGAGAAAAGGGAAGGAAGAAACGGAAGGCAA |
| NT_024397:58 | NT_024397:58 | na | | ZnF-C2H2 | Found | | |
| NT_025920:29 | NT_025920:29 | na | | bHLH | Found | | |
| NT_026437:3411 | NT_026437:3411 | na | | ZnF-C2H2 | Found | | ATTTACAACACTCAGGCAGCCCCGAGGGTTCCTCCTCCTGAAGCCCTTTC |
| NT_028392:557 | NT_028392:557 | na | | bZIP | Found | | |
| NT_029256:2 | NT_029256:2 | na | | Beta-scaffold-CCAAT | Found | | |
| NT_029991:365 | NT_029991:365 | na | | Other | Found | | |
| NT_029998:4 | NT_029998:4 | na | | bHLH | Found | | |
| NT_030828:357 | NT_030828:357 | na | | T-box | Found | | |
| NT_031730:53 | NT_031730:53 | na | | ZnF-C2H2 | Found | | TGCATTATGTCTAAGGCGTGTGAGAGCAGTGGGATTTGGCTCAGAATCCC |
| NT_031818:137 | NT_031818:137 | na | | ZnF-C2H2 | Found | | ATGTCAACCGCAGTCCCCGTGTTATCCAGGAGGAAGCGAAGAAAACACTG |
| NT_031818:172 | NT_031818:172 | na | | ZnF-C2H2 | Found | | |
| NT_031818:32 | NT_031818:32 | na | | bHLH | Found | | |
| NT_033216:4 | NT_033216:4 | na | | ZnF-C2H2 | Found | | |
| NT_033276:184 | NT_033276:184 | na | | ZnF-C2H2 | Found | | GGAAACGGCCACAGGATTTGAAAATTGGGAAATCATCAGTGAATTCTGGG |
| NT_033299:111 | NT_033299:111 | na | | ZnF-C2H2 | Found | | |
| NT_033317:19 | NT_033317:19 | na | | ZnF-C2H2 | Found | | |
| NT_033985:117 | NT_033985:117 | na | | ZnF-C2H2 | Found | | AGATCCCAGGTACCTGTGTGGGTTCCCTCAGACCTGGCCCCAGTACTTTT |
| NT_033985:38 | NT_033985:38 | na | | ZnF-C2H2 | Found | | |
| NT_034483:65 | NT_034483:65 | na | | Trp Cluster-Myb | Found | | TGAAAAATAAGATAAGCTGCCCTGTGGTCCTGATGGTCAGCCCAGTTTGG |
| NT_034886:16 | NT_034886:16 | na | | bHLH | Found | | |
| NT_035081:14 | NT_035081:14 | na | | ZnF-C2H2 | Found | | CTGACCCCCAGGACATCAGCTGCCACCAAAGCCCTTCCAAGACAGACCAT |
| NT_035089:9 | NT_035089:9 | na | | ZnF-C2H2 | Found | | |
| NT_035218:11 | NT_035218:11 | na | | Heat Shock | Found | | |
| NT_035360:17 | NT_035360:17 | na | | Beta-scaffold-HMG | Found | | |
| NT_035362:75 | NT_035362:75 | na | | Other | Found | | |
| NT_035560:142 | NT_035560:142 | na | | ZnF-PHD | Found | | |
| NT_035560:2 | NT_035560:2 | na | | ZnF-C2H2 | Found | | |
| NT_035560:27 | NT_035560:27 | na | | ZnF-C2H2 | Found | | |
| NT_035560:33 | NT_035560:33 | na | | ZnF-C2H2 | Found | | |
| NY-REN-34 | | NM_016119 | 51131 | ZnF-PHD | Seed | putative zinc finger protein NY-REN-34 antigen | GGCAATCATGTACAGCCACCCGAAACAATGAAATGTAATACATTCATAAG |
| OAZ | | AB018303 | 23090 | ZnF-C2H2 | Seed | OLF-1/EBF associated zinc finger gene | TTCGAGAACGAGAGAGAGATCCAAATCCACGTTGCCAACCACATGATTGA |
| ODD | NT_005214:38 | NM_145260 | 130497 | ZnF-C2H2 | Found | odd-skipped homolog (Drosophila) | AAGAAGGAATTCGTCTGCAAGTTCTGTGGCCGCCACTTCACCAAGTCCTAC |
| OG2x | | AC004534 | | Homeobox | Seed | OG2x OG2 homeobox (mouse) homolog | AGATATTCCAAGAAGACCACTATCCTGACAGTGATAAACGCCGAGAGATT |
| OLIG1 | | BC026989 | 116448 | bHLH | Seed | oligodendrocyte transcription factor 1 | GGGTTGGGACGTGGGTCCACTTTTGTAGACCAGCTGTTTGGAGAGCTGTA |
| OLIG2 | | NM_005806 | 10215 | bHLH | Seed | oligodendrocyte transcription factor 2 | CCTGGGGACAAGCTAGGAGGCAGTGGCTTCAAGTCGTCCTCGTCCAGCAC |
| OLIG3 | | NM_175747 | 167826 | bHLH | Seed | oligodendrocyte transcription factor 3 | ATCTCAACCGAGGTCCAGGGCATGACACCTCCTATGTGGGTTTTCCTTTC |
| ONECUT1 | | U96173 | 3175 | Homeobox | Seed | one cut domain, family member 1 | TCCAATTCAGGCAACTCATCTTCTTCATCAAGCACTTGTACCAAAGCATG |
| ONECUT2 | | NM_004852 | 9480 | Homeobox | Seed | one cut domain, family member 2 | CTTACGCCTGGCAGCGTGCAAACGCAAAGAGCAAGAACCAAACAAAGACA |
| OPTN | | NM_021980 | 10133 | Co-activator | Seed | optineurin | GAGAGGTTCTGCCTGACATAGACACGTTACAGATTCACGTGATGGATTGC |
| OSR1 | | NM_145260 | 130497 | ZnF-C2H2 | Seed | odd-skipped related 1 | AAGAGCCGGGCGTTATATTGCGATTGGCACTTTATGCTGACCATCGGTAA |
| OSR2 | NT_008046:515 | NM_053001 | 116039 | ZnF-C2H2 | Found | odd-skipped-related 2A protein | CGGACAGAAAGCCCTCTCGAGGAAGGTTGCCCTCCAAAACGAAAAAAGAGTTTA |
| OTEX | NT_011588:87 | NM_139282 | 158800 | Homeobox | Found | paired-like homeobox protein OTEX | CAATGAACTACGTGCTGACCCAGACGACTGTGTCTACATCGTCGTGGACT |
| OTP | NT_006713:546 | NM_032109 | 23440 | Homeobox | Found | orthopedia homolog (Drosophila) | CTCCCTCCGCCGCAAGGCGCTAGAGCACACAGTCTCTATGAGCTTCACTT |
| OTX1 | | NM_014562 | 5013 | Homeobox | Seed | orthodenticle homolog 1 (Drosophila) | GACTGTCTGGACTATAAGGACCAAGCCTCATGGCGGTTCCAGGTCTTGTG |
| OTX2 | | NM_021728 | 5015 | Homeobox | Seed | orthodenticle homolog 2 (Drosophila) | CTGCTTGGATTATAAAGATCAGACATCCTCGTGGAAATTCCAGGTTTTGT |
| OTX3 | | NM_147192 | 127343 | Homeobox | Seed | orthodenticle homolog 3 (Drosophila) | CATAGCCAGGAAACCCAGCTCAGCAAACTCCCTTTCAAAGCTGTGTGACC |
| OVOL1 | | NM_004561 | 5017 | ZnF-C2H2 | Seed | ovo-like 1(Drosophila) | TGCTCTCTGGAGTCTCACCTCAAGAAGATCCATGGTGTGCAGCAGAAGTA |
| OVOL3 | | AD001527 | 148142 | ZnF-C2H2 | Seed | ovo-like 3 (Drosophila) | AAGCTCACCTTGCTAAGGTGCATGGACAGCCGGCCAGCTACGCTTACCGT |
| p100 | | NM_014390 | 27044 | Co-activator | Seed | EBNA-2 Co-activator (100kD) | TAGCTACAAGCCCGTGTTTGTGACCGAGATCACTGATGACCTGCACTTCT |
| P1P373C6 | | NM_019110 | 56053 | ZnF-C2H2 | Seed | hypothetical protein P1 p373c6 | TCATCTCTTTTTGTACTGTGAACCTCCTTGGCAGTAAGGGTTTGCTGAAA |
| P38IP | | NM_017569 | 55578 | Other | Seed | transcription factor (p38 interacting protein) | AAACCGTGTCAGTTCAGTCTTCGGTATTGGGGAAGGGTGTAAAACATCGA |
| PAWR | NT_019546:106 | NM_002583 | 5074 | bZIP | Found | PRKC, apoptosis, WT1, regulator | AGGAAGCTGCGGGAGAAGCGGCGCTCCACCGGCGTGGTCAACATCCCTGCCGC |
| PAX1 | | NM_006192 | 5075 | Paired Box | Seed | paired box gene 1 | GTGAATGGGCTAGAGAAACCTGCCTTAGAGGCAGACATTAAATACACTCA |
| PAX2 | | NM_000278 | 5076 | Paired Box | Seed | paired box gene 2 | TGGAGATTCAGCAACCCCGCCTTACTAAGTTCCCCTTATTATTATAGTGC |
| PAX3 | | NM_000438 | 5077 | Paired Box | Seed | paired box gene 3 (Waardenburg syndrome 1) | GGGAAATCCGAGACAAATTACTCAAGGACGCGGTCTGTGATCGAAACACC |
| PAX4 | | NM_006193 | 5078 | Paired Box | Seed | paired box gene 4 | GTCTGGTTTTCCAACAGAAGAGCCAAATGGCGTCGGCAAGAGAAGCTCAA |
| PAX5 | | NM_016734 | 5079 | Paired Box | Seed | paired box gene 5 (B-cell lineage specific activator protein) | TTTGAGAGGCAGCACTACTCAGACATCTTCACCACCACAGAGCCCATCAA |
| PAX6 | | NM_000280 | 5080 | Paired Box | Seed | paired box gene 6 (aniridia, keratitis) | CGTGCGACATTTCCCGAATTCTGCAGGTGTCCAACGGATGTGTGAGTAAA |
| PAX7 | | NM_002584 | 5081 | Paired Box | Seed | paired box gene 7 | TGCTTGTTTATGGAGAGCTACAAGGTGGTGTCAGGGTGGGGAATGTCCAT |
| PAX8 | | NM_003466 | 7849 | Paired Box | Seed | paired box gene 8 | CAGTTCTAGCTCCACCCCTTCCTCTTTATCTAGCTCCGCCTTTTTGGATC |
| PAX9 | | NM_006194 | 5083 | Paired Box | Seed | paired box gene 9 | CCCAAGTGTCGCCTTACATGACCTACAGTGCTGCTCCTTCTGGTTATGTT |
| PAXIP1L | | U80735 | 22976 | Co-activator | Seed | PAX transcription activation domain interacting protein 1 like | GTTTTCCAGCTGCTTTCCTGGGGGATCAGACTGTGAAGCAGGAAGACAGA |
| PBX1 | | NM_002585 | 5087 | Homeobox | Seed | pre-B-cell leukemia transcription factor 1 | ATTACAGAGCCAAACTCTCACAGATCAGACAAATCTACCATACGGAGCTG |
| PBX2 | | NM_002586 | 5089 | Homeobox | Seed | pre-B-cell leukemia transcription factor 2 | TGAGGTCCTAAATGAGTATTTCTACTCCCACCTGAGTAACCCATATCCTA |
| PBX3 | | NM_006195 | 5090 | Homeobox | Seed | pre-B-cell leukemia transcription factor 3 | GATTTTAAGATCAAGGTTCCTTGATGCCAGACGGAAAAGGCGTAACTTCA |
| PBX4 | | NM_025245 | 80714 | Homeobox | Seed | pre-B-cell leukemia transcription factor 4 | AGAAGAGGCTACCATTTACACGGGTAAAACGGCTGTGGATACCACGGAAG |
| PC4 | | NM_006713 | 10923 | Co-activator | Seed | activated RNA polymerase II transcription cofactor 4 | GGAGCCAGCTGAAGGAACAGATTTCTGACATAGATGACGCAGTAAGAAAG |
| PCAF | NT_022517:55 | NM_003884 | 8850 | Bromodomain | Found | p300/CBP-associated factor | TGGAACCTGTGAAGAGAACAGAAGCTCCAGGATATTATGAAGTTATAAGGTTCCC |
| PCAR | | AF174394 | | Other | Seed | hypothetical protein I38022 | GTGAAACTTACCTGATTAGTACAGCCAAGATTGTCTTATCCAGGTTAGGC |
| PCQAP | | NM_015889 | 51586 | Co-activator | Seed | PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein | ATGGCACTGTCCACCTGATCTGCAAGCTGGATGACAAGGACCTCCCAAGT |
| PDEF | | NM_012391 | 25803 | Trp cluster-Ets | Seed | prostate epithelium-specific Ets transcription factor | AGCTATGGCCGCTTCATTAGGTGGCTCAACAAGGAGAAGGGCATCTTCAA |
| PEGASUS | | NM_022466 | 64376 | ZnF-C2H2 | Seed | zinc finger protein, subfamily 1A, 5 (Pegasus) | GTGATATGTACTTTGCAGACAACATCCTTTACACTATTCATATGGGATGT |
| PER1 | | NM_002616 | 5187 | bHLH | Seed | period homolog 1 (Drosophila) | CCTTGGTGCTCCCTAACTATCTGTTCCCAACCCCATCCAGCTATCCTTAT |
| PER2 | | NM_003894 | 8864 | bHLH | Seed | period homolog 2 (Drosophila) | AAATCTCCTTCATCATTGGGAGGCACAAAGTCAGGGTGGGCCCTTTGAAT |
| PER3 | | NM_016831 | 8863 | bHLH | Seed | period homolog 3 (Drosophila) | GAATGATACGGCAGACACCTGAGCGCATTCTCATGACATACCAGGTACCT |
| PFDN5 | | NM_002624 | 5204 | Co-repressor | Seed | prefoldin 5 | CAACGAGGGGAAAGAATTACTCGTCCCACTGACGAGTTCTATGTATGTCC |
| PGR | | NM_000926 | 5241 | NHR | Seed | progesterone receptor | AAGTATTGTTACTTCTTAATACAATTCCTTTGGAAGGGCTACGAAGTCAA |
| PHC1 | | NM_004426 | 1911 | Structural | Seed | polyhomeotic-like 1 (Drosophila) | AGAGGAATTTCGCTCACAGGAGATTGATGGACAGGCCCTTTTATTACTTA |
| PHD3 | | NM_015153 | 23183 | ZnF-PHD | Seed | PHD finger protein 3 | GGCTTGAACTGCATAGACCTAATCTATTGTTGGGCTTAATTATTCGTCAG |
| PHF15 | NT_034776:94 | NM_015288 | 23338 | ZnF-PHD | Found | PHD finger protein 15 | AAGATCCCGGACTCATACCAGCTCAGCCCGGATGACTACTACATCCTGGC |
| PHF16 | NT_011568:120 | NM_014735 | 9767 | ZnF-PHD | Found | PHD finger protein 16 | GTGCTATGTGAAGCCAACCAAGAATATGAGCCCCAAGGAGCAGTTCTGGGGTAG |
| PHTF1 | | NM_006608 | 10745 | Homeobox | Seed | putative homeodomain transcription factor | TATAAGTGATCTTCTAGGATTTAATATAAGACTGTGGAAAATTAAATCAT |
| PIAS1 | NT_010222:2 | NM_016166 | 8554 | ZnF-MIZ | Found | protein inhibitor of activated STAT, 1 | CTACTATGTCCACTTGGTAAAATGCGGCTGACAATTCCGTGTCGGGCCCTT |
| PIAS3 | | NM_006099 | 10401 | ZnF-MIZ | Seed | protein inhibitor of activated STAT3 | CCATTGTGGTCAATTGGTCATCTGAGTTCGGACGGAATTACTCCTTGTCT |
| PIASY | NT_011255:153 | NM_015897 | 51588 | ZnF-MIZ | Found | protein inhibitor of activated STAT protein PIASy | CTCTCGAAGATCCTGAGCGAGTGTGAGGACGCCGACGAGATCGAGTACCT |
| PIG7 | | NM_004862 | 9516 | Other | Seed | LPS-induced TNF-alpha factor | TTCTTTTGGGGGGAATACGTCGCAAAACTAACAAATCTCCAAACCCCAGA |
| PILB | | NM_012228 | 22921 | Other | Seed | pilin-like transcription factor | ATGAAAGCCACACAGGGATCCTGAGACGTCTGGATACCTCGTTAGGATCA |
| PITX1 | | NM_002653 | 5307 | Homeobox | Seed | paired-like homeodomain transcription factor 1 | TCACCTTCTTCAACTCCATGAGCCCGCTGTCGTCGCAGTCCATGTTCTCA |
| PITX2 | | NM_000325 | 5308 | Homeobox | Seed | paired-like homeodomain transcription factor 2 | GACCAACTGCCGCAAACTGGTGTCGGCGTGTCTGCAATTAGAGAAAGATA |
| PITX3 | | NM_005029 | 5309 | Homeobox | Seed | paired-like homeodomain transcription factor 3 | AAGACCTTTCCATTCGCCTTCAACTCGGTCAACGTGGGGCCTCTGGCTTC |
| PKNOX1 | | NM_004571 | 5316 | Homeobox | Seed | PBX/knotted 1 homeobox 1 | GCTCAGACAAATTTGACACTACTCCAAGTCAACAACTGGTTCATCAATGC |
| PKNOX2 | | NM_022062 | 63876 | Homeobox | Seed | PBX/knotted 1 homeobox 2 | ACAACCGTCAACTCACAAGTTGTGTCAGGTGGAGCCTTATACCAACCGGT |
| PLAG1 | | NM_002655 | 5324 | ZnF-C2H2 | Seed | pleiomorphic adenoma gene 1 | AAAAGCACCAGTGCGAACATTGTGATCGCCGGTTCTACACCCGAAAGGAT |
| PLAGL1 | | NM_002656 | 5325 | ZnF-C2H2 | Seed | pleiomorphic adenoma gene-like 1 | AGTCACCTCAAAAGCTCAACCCAGGTTTTGATCTGGCTAAGGGAAATGCT |
| PLAGL2 | | NM_002657 | 5326 | ZnF-C2H2 | Seed | pleiomorphic adenoma gene-like 2 | AAATACCAGCTTGGATCTACCTCATACTTGCCCGACAAATTGCCCAAAGT |
| PLRG1 | | NM_002669 | 5356 | Co-repressor | Seed | pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) | CAAAATCTTTCCGGTCATAATGCTATTATTAACACATTGACGGTAAATTC |
| PMF1 | | NM_007221 | 11243 | Co-activator | Seed | polyamine-modulated factor 1 | TCCCAGAGAAGGATCTGCACAGTGTTATAGCACCCTACTTCCTGCAGCAA |
| PML | | NM_002675 | 5371 | Structural | Seed | promyelocytic leukemia | TCCATCAAAGGCCCTTCCTATGGAGAGGATGTCTCCAATACAACGACAGC |
| PMX1 | | NM_006902 | 5396 | Homeobox | Seed | paired mesoderm homeo box 1 | CTCGTCCCTCCCAAGATGTTGTTTACACGAGGGGCTTCATAACGGATTCT |
| PMX2B | | NM_003924 | 8929 | Homeobox | Seed | paired mesoderm homeobox 2b | AAAATGGAATATTCTTACCTCAATTCCTCTGCCTACGAGTCCTGTATGGC |
| POU1F1 | | NM_000306 | 5449 | Homeobox | Seed | POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1) | GTGCATGGCTCTGAATTCAGTCAAACAACAATCTGCCGATTTGAAAATCT |
| POU2AF1 | | NM_006235 | 5450 | Co-activator | Seed | POU domain, class 2, associating factor 1 | ATCGACAAGCTGCTTTTGGAGGAAGAGGATAGCGACGCCTATGCGCTTAA |
| POU2F1 | | NM_002697 | 5451 | Homeobox | Seed | POU domain, class 2, transcription factor 1 | CAATAACATCACTTGATGCAACTGGGAACCTGGTATTTGCCAATGCGGGA |
| POU2F2 | | NM_002698 | 5452 | Homeobox | Seed | POU domain, class 2, transcription factor 2 | CAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGA |
| POU2F3 | | NM_014352 | 25833 | Homeobox | Seed | POU domain, class 2, transcription factor 3 | AGGAAATGATCGAAAAGGCCTAGATTTCAACAGGCAGATTAAAACCGAAG |
| POU3F1 | | NM_002699 | 5453 | Homeobox | Seed | POU domain, class 3, transcription factor 1 | GGGAGGTCGCGAGAGCCGCGTCTGTGTATAAAAGCAGGAAATAGCCAAAG |
| POU3F2 | | NM_005604 | 5454 | Homeobox | Seed | POU domain, class 3, transcription factor 2 | GAGGTGGTGAGAGTTTGGTTTTGTAACAGGAGACAGAAAGAGAAAAGGAT |
| POU3F3 | | NM_006236 | 5455 | Homeobox | Seed | POU domain, class 3, transcription factor 3 | ATCCAACAGCAGACGCCCGACGACGTCTACTCGCAGGTGGGCACCGTGAG |
| POU3F4 | | NM_000307 | 5456 | Homeobox | Seed | POU domain, class 3, transcription factor 4 | AGCCGCATGAGGTTTATTCGCACACCGTGAAAACAGACACATCTTGCCAT |
| POU4F1 | | NM_006237 | 5457 | Homeobox | Seed | POU domain, class 4, transcription factor 1 | GAGAAACTGGACCTCAAAAAGAACGTGGTGCGGGTGTGGTTTTGCAACCA |
| POU4F2 | | NM_004575 | 5458 | Homeobox | Seed | POU domain, class 4, transcription factor 2 | TGCAACCAGAGGCAGAAACAGAAAAGAATGAAATATTCCGCCGGCATTTA |
| POU4F3 | | NM_002700 | 5459 | Homeobox | Seed | POU domain, class 4, transcription factor 3 | TTCACTCGAGGCCTATTTCGCTATCCAGCCACGTCCTTCATCTGAGAAGA |
| POU5F1 | | NM_002701 | 5460 | Homeobox | Seed | POU domain, class 5, transcription factor 1 | AGAAGGGCAAGCGATCAAGCAGCGACTATGCACAACGAGAGGATTTTGAG |
| POU6F1 | | NM_002702 | 5463 | Homeobox | Seed | POU domain, class 6, transcription factor 1 | AGGAGATCACTGAAATTGCTAAGGAGCTCAACTACGACCGTGAGGTAGTG |
| PPARA | | NM_005036 | 5465 | NHR | Seed | peroxisome proliferative activated receptor, alpha | GCTGGTAGCGTATGGAAATGGGTTTATAACTCGTGAATTCCTAAAAAGCC |
| PPARBP | | NM_004774 | 5469 | Co-activator | Seed | peroxisome proliferator activated receptor binding protein | AAAGTAAAAGACAAAGATAGGGACCGAGACCGGGACAAAGACCGAGACAA |
| PPARD | | NM_006238 | 5467 | NHR | Seed | peroxisome proliferative activated receptor, delta | TTGATGACAGTGACCTGGCCCTATTCATTGCGGCCATCATTCTGTGTGGA |
| PPARG | | NM_005037 | 5468 | NHR | Seed | peroxisome proliferative activated receptor, gamma | GGGGTTCTCATATCCGAGGGCCAAGGCTTCATGACAAGGGAGTTTCTAAA |
| PPARGC1 | | NM_013261 | 10891 | Co-activator | Seed | peroxisome proliferative activated receptor, gamma, coactivator 1 | GAGCGCCGTGTGATTTATGTCGGTAAAATCAGACCTGACACAACACGGAC |
| PRDM1 | | NM_001198 | 639 | Structural | Seed | PR domain containing 1, with ZNF domain | TCTGGTACCTGTAAAGGTCAAACAAGAAACAGTTGAACCAATGGATCCTT |
| PRDM10 | | NM_020228 | 56980 | Structural | Seed | PR domain containing 10 | CAGACCTTAACGACAGACTACCGAACGCCACAAGGGGATTACCAGAGAAT |
| PRDM11 | | NM_020229 | 56981 | Structural | Seed | PR domain containing 11 | AAGAACAACCGCTATAAGTCCATAGATGGCTCAGACGAGACCGAAGCCAA |
| PRDM12 | | NM_021619 | 59335 | Structural | Seed | PR domain containing 12 | ACCAGCATCTTCTACAAGGCCATTGAGATGATCCCACCTGACCAGGAACT |
| PRDM13 | | NM_021620 | 59336 | Structural | Seed | PR domain containing 13 | TTTAGATACCCCAACAGCCTTAAGGCACACCTGCGTTTCCACTGCGTGTT |
| PRDM14 | | NM_024504 | 63978 | Structural | Seed | PR domain containing 14 | GTTTTATCGCCAAAGGAGTCAGGTTTGGGCCCTTTCAAGGTAAAGTGGTC |
| PRDM15 | | NM_144771 | 63977 | Structural | Seed | PR domain containing 15 | TTGTTCAGCCGCAAAGAGAGCCTAAAGCAGCACGTTTCCTACAAGCACAG |
| PRDM16 | | NM_022114 | 63976 | Structural | Seed | PR domain containing 16 | AATAGTGAGATGAACCAAGCATCAACGCGAACAGAGAAACGGGCGGACAT |
| PRDM2 | | NM_012231 | 7799 | Structural | Seed | PR domain containing 2, with ZNF domain | GGCGAGTAAGAAAAGAACAGACCGGTTCAATATAAAATCTAGAGAGCGGA |
| PRDM4 | | NM_012406 | 11108 | Structural | Seed | PR domain containing 4 | CTTTTATCTCTCCTTCCAAACTTCATGTCTACTTTATGGGTCACATGGGT |
| PRDM5 | | NM_018699 | 11107 | Structural | Seed | PR domain containing 5 | AAAATGCTGATTCGACACAAGATGACTCATAATCCCAATCGTCCCCTGGC |
| PRDM6 | | AF272898 | 11106 | Structural | Seed | PR domain containing 6 | CAATGAGTGCAAGCCAATAACTGAGAGCCCAGAATCAATCGAAGTGGATT |
| PRDM7 | | AF274348 | 11105 | Structural | Seed | PR domain containing 7 | GGATGGAAAAGATAAATCCTCGGCCAACTGGATGAGAACCAAAGCCAGAG |
| PRDM8 | | NM_020226 | 56978 | Structural | Seed | PR domain containing 8 | AACTGACTGAGTTACTCTTGCTTTGCCCCTCTAGATCCCACAACAAAATG |
| PRDM9 | | NM_020227 | 56979 | Structural | Seed | PR domain containing 9 | CCAACAATGGATACTCCTGGCTGGTAAGAAGAGCCTGCCATTTCACCAAG |
| PREB | | NM_013388 | 10113 | Other | Seed | prolactin regulatory element binding | TTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACC |
| PRKCBP1 | NT_011362:1003 | NM_012408 | 23613 | ZnF-MYND | Found | protein kinase C binding protein 1 | TCTCGGAAGATGTCTATACGGCCGTAGAGCACAGCGATTCGGAGGATTCTG |
| PRO1257 | NT_029874:20 | NM_018578 | 55444 | Beta-scaffold-HMG | Found | hypothetical protein PRO1257 | TGAACATAAATCTCACATATGGAGAGGGCTTTCTCTGTTTCTGCAAAGGATGTGA |
| PROP1 | | NM_006261 | 5626 | Homeobox | Seed | prophet of Pit1, paired-like homeodomain transcription factor | GCGCCTTTGCTTTGTCACACCAGTCTGAGGACTGGTACCCTACCTTGCAC |
| PROX1 | | NM_002763 | 5629 | Homeobox | Seed | prospero-related homeobox 1 | TATCACCTTATTCGGGAAGTGCAATGCAGGAAGGATTGTCACCCAATCAC |
| PRX2 | | NM_016307 | 51450 | Homeobox | Seed | paired related homeobox protein | TGAGTCCAGATTATCTCTCCTGGACAGCCTCGTCCCCCTACAGCACAGTG |
| PSIP1 | | NM_021144 | 9090 | Co-activator | Seed | PC4 and SFRS1 interacting protein 1 | AGGAAAAATTTAGCTAAAACAGGGGTTACTTCAACCTCCGATTCTGAAGA |
| PSMC2 | NT_007933:2739 | NM_002803 | 5701 | Co-activator | Found | proteasome (prosome, macropain) 26S subunit, ATPase, 2 | |
| PSMC5 | | NM_002805 | 5705 | Co-activator | Seed | proteasome (prosome, macropain) 26S subunit, ATPase, 5 | ATCAAGGTTATCATGGCTACTAATAGGATTGATATGCTGGACTCGGCACT |
| PTF1A | NT_008705:1995 | NM_178161 | 607194 | bHLH | Found | pancreas specific transcription factor, 1a | GAAGGTCATCATCTGCCATCGGGGCACCCGGTCCCCCTCCCCCAGCGACCC |
| PTTG1IP | | NM_004339 | 754 | Co-activator | Seed | pituitary tumor-transforming 1 interacting protein | AGTTTGTTGGGTGAACTTTGAGGCGCTGATCATCACCATGTCGGTAGTCG |
| PURA | | NM_005859 | 5813 | Other | Seed | purine-rich element binding protein A | GCCAAGTTCGGACACACCTTCTGCAAGTACTCGGAGGAGATGAAGAAGAT |
| R28830_2 | | AC003682 | | ZnF-Other | Seed | similar to ZNF197 (ZNF20) | TTTAGCCAAAGCTCTGGCCTCTTAAGACACAGAAGAGTTCATGTGCAGTG |
| R32184_3 | | NM_033420 | 91304 | Other | Seed | hypothetical protein MGC4022 | ATCATGTCGGAGTTCTTCAACGACACCACCACCGCCTTCTACATCATCCT |
| RAI | | NM_006663 | 10848 | Co-repressor | Seed | RelA-associated inhibitor | CAACTACTCTATCGTGGATTTCCTCATCACCGCGGGTGCCAATGTCAACT |
| RAI15 | | U50383 | 10322 | Other | Seed | retinoic acid induced 15 | ACGTTGACGCCTTCATTGACCAGCTATACAAGGACATCGAGGCAGCAACT |
| RARA | | NM_000964 | 5914 | NHR | Seed | retinoic acid receptor, alpha | CTGGGCAAATACACTACGAACAACAGCTCAGAACAACGTGTCTCTCTGGA |
| RARB | | NM_000965 | 5915 | NHR | Seed | retinoic acid receptor, beta | GATCAATGCCACCTCTCATTCAAGAAATGATGGAGAATTCTGAAGGACAT |
| RARG | | NM_000966 | 5916 | NHR | Seed | retinoic acid receptor, gamma | TCAAAGCTGCCTGCCTAGATATCCTGATGCTGCGTATCTGCACAAGGTAC |
| RAX | | NM_013435 | 30062 | Homeobox | Seed | retina and anterior neural fold homeobox | AACAGCCCAAGAAAAAGCATCGGCGGAACCGCACGACTTTCACCACGTAC |
| RB1 | | NM_000321 | 5925 | Pocket domain | Seed | retinoblastoma 1 (including osteosarcoma) | GAGTATGATTCTATTATAGTATTCTATAACTCGGTCTTCATGCAGAGACT |
| RBAF600 | | AB007931 | 23352 | ZnF-C2H2 | Seed | retinoblastoma-associated factor 600 | AGTTCCTCGATGTGGCCGGTCTTTTATCAGAAATCACCGATCCAGAGAGC |
| RBAK | NT_007819:532 | NM_021163 | 57786 | Other | Found | RB-associated KRAB repressor | TTGTAAATTCAGCCTTCGATGGGCACCAGCCACTTCCAAAAGGGGAGAAAT |
| RBBP5 | | NM_005057 | 5929 | Co-repressor | Seed | retinoblastoma binding protein 5 | TTGGATGAAAATGTAGAATACGAAGAAAGGGAATCAGGGTTTGATATTGA |
| RBBP9 | | NM_006606 | 10741 | Co-repressor | Seed | retinoblastoma binding protein 9 | AGAAGTGGCAGATAGCTGGACGCCAAATTGTACAAATTCACTGACCGTGG |
| RBL1 | | NM_002895 | 5933 | Pocket domain | Seed | retinoblastoma-like 1 (p107) | GTTCCAGTGGACCAGTGAAAGAGGAAAGAAGTGATCTTATAAAATTTTAC |
| RBL2 | | NM_005611 | 5934 | Pocket domain | Seed | retinoblastoma-like 2 (p130) | CATTCTGCCTTATTACGCCGTCTCCAAGATGTAGCTAATGACCGTGGTTC |
| RBPSUH | | NM_016270 | 3516 | ZnF-C2H2 | Seed | recombining binding protein suppressor of hairless (Drosophila) | CCATCGCCTGGGAAATTTGGTGAGCGGCCTCCACCTAAACGACTTACTAG |
| RBPSUHL | | NM_014276 | 11317 | Other | Seed | recombining binding protein suppressor of hairless-like (Drosophila) | ATCCATCAGGAGTTCACGCGCACCAACTTCCACCTCTTCATCCAGACTTA |
| RCOR | | NM_015156 | 23186 | Other | Seed | REST corepressor | TTTGTAAATTATCGACGCCGCTTCAACATAGATGAAGTTTTACAAGAATG |
| RCV1 | | NM_002903 | 5957 | Other | Seed | recoverin | AGGAGTCCTAAGTGTCACCCCGCTGTAAGCTCCTTTGTGGAGTGCTGGGT |
| REL | | NM_002908 | 5966 | Beta-scaffold-RHD | Seed | v-rel reticuloendotheliosis viral oncogene homolog (avian) | GTTTTGTTCAAGATAGTCAGTATTCAGGTATTGGCAGTATGCAAAATGAG |
| RELA | | NM_021975 | 5970 | Beta-scaffold-RHD | Seed | v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian) | CAGATACAGACGATCGTCACCGGATTGAGGAGAAACGTAAAAGGACATAT |
| RELB | | NM_006509 | 5971 | Beta-scaffold-RHD | Seed | v-rel reticuloendotheliosis viral oncogene homolog B, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 (avian) | TCCACAAACACATCAGAGCTGCGGATTTGCCGAATTAACAAGGAAAGCGG |
| REQ | | NM_006268 | 5977 | ZnF-PHD | Seed | requiem, apoptosis response zinc finger gene | TGTGGTGGAGAATGTAGTGAAGCTCCTTGGGGAGCAGTACTACAAAGATG |
| RERE | | NM_012102 | 473 | Other | Seed | arginine-glutamic acid dipeptide (RE) repeats | GGCATGGTGGCCACCTACCAAGTCAGGAAGATTATTACAGTCGACTGAAG |
| REST | | NM_005612 | 5978 | ZnF-C2H2 | Seed | RE1-silencing transcription factor | GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTTACTATCTTG |
| RFP | NT_033168:4 | NM_006510 | 5987 | Structural | Found | ret finger protein | CATGCTTCATCGCCGGGAGACATTATTGGGAGGTAGAGGTGGGAGATAAA |
| RFP | | NM_006510 | 5987 | Structural | Seed | ret finger protein | CAAGCAAGCCCCCATGATGGTTCTCAGTCCTGCTTCTCTGTGGGTACGTG |
| RFP2 | | NM_005798 | 10206 | Structural | Seed | ret finger protein 2 | AACTTCACTTCCTATCTGACTAAAACAGCCGATTTCATAGAACAATCAGT |
| RFPL3 | NT_011520:1735 | NM_006604 | 10738 | Structural | Found | ret finger protein-like 3 | |
| RFX1 | | NM_002918 | 5989 | RFX | Seed | regulatory factor X, 1 (influences HLA class II expression) | TCCACCTCATCCGGCTGCTCTACGACGAGTACATGTACTACCTGATCGAG |
| RFX2 | | NM_000635 | 5990 | RFX | Seed | regulatory factor X, 2 (influences HLA class II expression) | TTGGAAGGCTGGTTGACAAATGCCATGAGTGACTTCCCACAACAGGTCAT |
| RFX3 | | NM_002919 | 5991 | RFX | Seed | regulatory factor X, 3 (influences HLA class II expression) | ACCTGATCCGTCTACTCTACGACGAATATATGTTTTACTTAGTAGAACAT |
| RFX4 | | NM_002920 | 5992 | RFX | Seed | regulatory factor X, 4 (influences HLA class II expression) | TGCATCCCTCGCAGTGCCCTCTATATGCATTACCTGGATTTCTGCGAGAA |
| RFX5 | | NM_000449 | 5993 | RFX | Seed | regulatory factor X, 5 (influences HLA class II expression) | CACAGGGTAATAAAGACTTAAAGGAGCATGTGCTTCAAAGTTCCTTATCC |
| RFXANK | | NM_003721 | 8625 | Co-activator | Seed | regulatory factor X-associated ankyrin-containing protein | GGATACCGGAAAGTGCAACAGGTGATCGAGAACCACATCCTCAAGCTCTT |
| RGC32 | | NM_014059 | 28984 | Other | Seed | RGC32 protein | AGTGATGAAAAACTGAATTCTCCAACAGACTCTACCCCAGCTCTTCTCTC |
| RIN3 | NT_026437:2459 | NM_024832 | 79890 | bHLH | Found | Ras and Rab interactor 3 | GGGGGTGTCTGTCATGGCCACCGACCAGGACTCCTACTCCACCAGCAGCAC |
| RING1 | | NM_002931 | 6015 | ZnF-Other | Seed | ring finger protein 1 | TTCACGACGTTGAATGGCTCGCTGACCCTGGAGCTGGTGAATGAGAAATT |
| RIP60 | | NM_013400 | 29803 | ZnF-C2H2 | Seed | replication initiation region protein (60kD) | GAAGCGCTTTACCAATAAGCCCTATCTGACTTCGCACCGGCGCATCCACA |
| RIPX | NT_006216:11 | NM_014961 | 22902 | ZnF-PHD | Found | rap2 interacting protein x | TTAAAGAGGAAAGTTCCTACATACTGGAATCCAATCGGAAGGGTCCCAAGCAAGA |
| RLF | | NM_012421 | 6018 | ZnF-C2H2 | Seed | rearranged L-myc fusion sequence | CCCATCGCAGTAATTACTCACAACATGTATATTACCGACATAAAGACTAT |
| RNF10 | | NM_014868 | 9921 | ZnF-Other | Seed | ring finger protein 10 | ACTCCAGTGGATCCAAGCGTTATAATCGCAAACGTGAACTTTCCTACCCC |
| RNF12 | | NM_016120 | 51132 | ZnF-Other | Seed | ring finger protein 12 | TGCATCGATCGCTGGTTATCTGAGAATTCTACCTGTCCTATTTGTCGCAG |
| RNF13 | | NM_007282 | 11342 | ZnF-Other | Seed | ring finger protein 13 | AGTGCCCAGTCATTTGGGGCTTTATCGGAATCCCGCTCACATCAGAACAT |
| RNF135 | NT_035420:144 | NM_032322 | 84282 | ZnF-MIZ | Found | ring finger protein 135 isoform 1 | CCGACAAGTACCGCCGCGCCGCACGCGAGATACAGGCGGGCTCCGACCCT |
| RNF137 | NT_028310:82 | NM_018073 | 55128 | Structural | Found | ring finger protein 137 | GAAGGGAAATGAGTACCGAGCAGGCACCGATGAGTACCCAATCCTGTCCTT |
| RNF14 | | NM_004290 | 9604 | Co-activator | Seed | ring finger protein 14 | AATTAGACGGATGTAACAAGATGACATGTACTGGCTGTATGCAATATTTC |
| RNF144 | | NM_014746 | 9781 | ZnF-Other | Seed | Ring finger protein 144 | TGTACTTTGCTGCAAGTGCAAGTGCAGTAAAGGTGACGACGACCCGTTAC |
| RNF18 | NT_033240:76 | NM_020358 | 57093 | Structural | Found | ring finger protein 18 | |
| RNF2 | | NM_007212 | 6045 | Co-repressor | Seed | ring finger protein 2 | GTGAACAAACCCATGGAACTTTATTACGCACCTACAAAGGAGCACAAATG |
| RNF24 | | NM_007219 | 11237 | ZnF-Other | Seed | ring finger protein 24 | TTAAGTGGCTGGAGGTTCGTAAAGTGTGTCCCCTGTGCAACATGCCAGTT |
| RNF3 | | NM_006315 | 10336 | ZnF-Other | Seed | ring finger protein 3 | AAGGACCACACACTCAAGTTCGTGGTTGTCACTAGGTGGAGATTCAAGAA |
| RNF36 | NT_010194:2 | NM_080745 | 140691 | Structural | Found | ring finger protein 36 | TGGTGAGCATTCAGGCAAAGACGGAACAACAGAACTCCTTCGACTTTCTCAAAGA |
| RNF4 | | NM_002938 | 6047 | ZnF-Other | Seed | ring finger protein 4 | ATGCTAATACTTGCCCAACTTGTAGGAAAAAGATCAACCACAAACGGTAC |
| RNF8 | | NM_003958 | 9025 | ZnF-Other | Seed | ring finger protein (C3HC4 type) 8 | AAGATAGAATGCCCCATTTGTCGGAAGGACATTAAGTCCAAAACGTACTC |
| RORA | | NM_002943 | 6095 | NHR | Seed | RAR-related orphan receptor A | GGATGGAGCCACAGCCAAGAACTTTATTAATTTAAGGGAGTTCTTCTCTT |
| RORB | | NM_006914 | 6096 | NHR | Seed | RAR-related orphan receptor B | CTCCGTTATACAAGGAGCTCTTTAATCCTGACTGTGCCACCGCGTGCAAA |
| RORC | | NM_005060 | 6097 | NHR | Seed | RAR-related orphan receptor C | ATCATCATCTCTGCAAGACTCATCGCCAAAGCATCCTGGCAAAGCTGCCA |
| RPF-1 | | NM_007252 | 11281 | Homeobox | Seed | retina-derived POU-domain factor-1 | ACAGGTCAACTAGTTACTAATGCACAAGGACAGATTATCGGGACCATTCC |
| RREB1 | | NM_002955 | 6239 | ZnF-C2H2 | Seed | ras responsive element binding protein 1 | GAAAGGCCATACAAATGTCAGACCTGCGAGCGAACCTTCACCTTGAAGCA |
| RRN3 | | NM_018427 | 54700 | Other | Seed | RNA polymerase I transcription factor RRN3 | AGAAATTCATTGATCCTATTTATCAGGTGTGGGAAGACATGAGTGCTGAA |
| RUNX1 | | NM_001754 | 861 | Beta-scaffold-RUNT | Seed | runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) | TCCTACGATCAGTCCTACCAATACCTGGGATCCATTGCCTCTCCTTCTGT |
| RUNX2 | | NM_004348 | 860 | Beta-scaffold-RUNT | Seed | runt-related transcription factor 2 | TGTTTTGAATTCTAGTGGCAGAATGGATGAATCTGTTTGGCGACCATATT |
| RUNX3 | | NM_004350 | 864 | Beta-scaffold-RUNT | Seed | runt-related transcription factor 3 | TACCACCTCTACTACGGGACATCCTCTGGCTCCTACCAGTTCTCCATGGT |
| RXRA | | NM_002957 | 6256 | NHR | Seed | retinoid X receptor, alpha | GAACGACCCTGTCACCAACATTTGCCAAGCAGCCGACAAACAGCTTTTCA |
| RXRB | | NM_021976 | 6257 | NHR | Seed | retinoid X receptor, beta | TTCCTGCCCTCCGGTCCATTGGCCTTAAGTGTCTAGAGCATCTGTTTTTC |
| RXRG | | NM_006917 | 6258 | NHR | Seed | retinoid X receptor, gamma | TGACATGAATATGGAGAACTCGACAAATGACCCTGTTACCAACATATGTC |
| RYBP | NT_005526:6 | NM_012234 | 23429 | Co-repressor | Found | RING1 and YY1 binding protein | ACAACAAAGACCAGCGAAACAAATCACACCTCAAGGCCCCGGCTGAAAAAC |
| SAFB | | NM_002967 | 6294 | Other | Seed | scaffold attachment factor B | AGGGGTGCCTGTGATTAGTGTAAAAACATCCGGGTCCAAAGAGAGAGCTT |
| SALL1 | | NM_002968 | 6299 | ZnF-C2H2 | Seed | sal-like 1 (Drosophila) | CAATCAGAACTCAGCGGTGATTCCCGCCAACTCGTTGTCATCTCTCATCA |
| SALL2 | | AB002358 | 6297 | ZnF-C2H2 | Seed | sal-like 2 (Drosophila) | AGAAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGTGACTTCAC |
| SALL3 | | NM_171999 | 27164 | ZnF-C2H2 | Seed | sal-like 3 (Drosophila) | AGGCGAGGGTGCTCCACTATGGGTAATTTAAAACAGCACTTACTGACACA |
| SALL4 | | NM_020436 | 57167 | ZnF-C2H2 | Seed | similar to SALL1 (sal (Drosophila)-like | ATGGCTCTGTTAGGTACGGACGGAAAAAGAGTCTCAGAAATCTTTCCCAA |
| SAP18 | | NM_005870 | 10284 | Co-repressor | Seed | sin3-associated polypeptide, 18kD | AGATAGGAGATTACTTGGACATAGCAATTACCCCTCCAAATCGGGCACCA |
| SAP30 | | NM_003864 | 8819 | Co-repressor | Seed | sin3-associated polypeptide, 30kD | AGATAGTTGGTTGCCACTTTAGGTCTATTCCAGTGAATGAAAAAGACACC |
| SART3 | | NM_014706 | 9733 | Co-activator | Seed | squamous cell carcinoma antigen recognised by T cells 3 | AAAGTGGCAATCAGCAACCCTCCTCAGAGGAAAGTTCCAGAGAAGCCAGA |
| SATB1 | | NM_002971 | 6304 | Homeobox | Seed | special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNAs) | CAGCGGTACTATCTCAAGCACCACGGCAAACTGAAGGACAATTCCGGTTT |
| SATB2 | NT_005037:10 | NM_015265 | 23314 | Homeobox | Found | SATB family member 2 | AAGACAGTTGTGCCAAAAAGCCCCGGTCTCGCACAAAGATCTCCTTAGAAGC |
| SBB103 | | NM_005785 | 10193 | ZnF-Other | Seed | hypothetical SBBI03 protein | GGCCACACTAGAGACTAGACAGATGAACCGACGCTACTATGAGAACTACG |
| SBLF | | NM_006873 | 11037 | Other | Seed | stoned B-like factor | CTGTTTGACACGGATAATGTAATTGTCTGTCAGTATGATAAGATTCATCG |
| SBZF3 | NT_031730:7 | NM_020394 | 57116 | ZnF-C2H2 | Found | zinc finger protein SBZF3 | |
| SCA2 | | NM_002973 | 6311 | Other | Seed | spinocerebellar ataxia 2 (olivopontocerebellar ataxia 2, autosomal dominant, ataxin 2) | ATTCCATATGCTGTTTCAGAGTCCCGCAGGTACCCCAGCTCTGCTTGCCG |
| SCAND1 | | NM_016558 | 51282 | Co-activator | Seed | SCAN domain-containing 1 | TGACAGCATCCACAACACTTACTCAACTGACCATGCTTCTGCAGCACCAC |
| SCAND2 | | NM_022050 | 54581 | Co-activator | Seed | SCAN domain-containing 2 | TTTTGGCATTTCCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCT |
| SCMH1 | NT_004852:374 | NM_012236 | 22955 | Structural | Found | sex comb on midleg homolog 1 (Drosophila) | GTGGTGAGGTTATCTCAGCCGTGTTTGACCGGGAACAGCATACCCTCAAC |
| SCML1 | | NM_006746 | 6322 | Structural | Seed | sex comb on midleg-like 1 (Drosophila) | TGACAGCATCCACAACACTTACTCAACTGACCATGCTTCTGCAGCACCAC |
| SCML2 | | NM_006089 | 10389 | Structural | Seed | sex comb on midleg-like 2 (Drosophila) | CTGGGCCATGTAAAATAGTGATGTCTACAGTCTGTGTCTATGTAAACAAA |
| SCML4 | NT_033944:303 | NM_198081 | 256380 | Trp Cluster-Ets | Found | sex comb on midleg-like 4 | GCTTCCTCGCCAAGCTGTGCCGAAGCCTCCTGTGCGATGACCTCTTCAGC |
| SCRT1 | | NM_031309 | 83482 | ZnF-C2H2 | Seed | scratch homolog 1, zinc finger protein (Drosophila) | CCCGGCTTTCTCCCAGCAATAGGGTCGACGAGACCTAGAACCGAACCTCA |
| SCRT2 | | AL121758 | 85508 | ZnF-C2H2 | Seed | scratch homolog 2, zinc finger protein (Drosophila) | AGACGCACTCGGCCTTCAAGCACTACCGCTGCCGCCAGTGCGACAAGAGC |
| SDCCAG33 | | NM_005786 | 10194 | Homeobox | Seed | serologically defined colon cancer antigen 33 | CATTCCAATGTAAGCTCTGCAACCGGACTTTTGCGAAGCAAGCACGCAGT |
| SEI1 | | NM_013376 | 29950 | Co-activator | Seed | CDK4-binding protein p34SEI1 | TTGGTTGTGGGTGGCTACCTCTTCGTTCTGATTGGCCGCTAGTGAGCAAG |
| SETBP1 | | NM_015559 | 26040 | Beta-scaffold-HMG | Seed | SET binding protein 1 | TGATCACTATTACCCGGTGCCATATATCCAGTATGACCCGTTGCTCTATC |
| SETDB1 | | NM_012432 | 9869 | Structural | Seed | SET domain, bifurcated 1 | ACAAGGGGGAGAGCGCACCTGTTCGTAAGAACACACGCCAATTCTATGAT |
| SF1 | | NM_004630 | 7536 | ZnF-Other | Seed | splicing factor 1 | GTTGGCTCGCTTAAATGGGACCCTTCGGGAAGACGATAACAGGATCTTAA |
| SHARP | | NM_015001 | 23013 | Co-repressor | Seed | SMART/HDAC1 associated repressor protein | AGACATTACGATCAGGATTACTATAGAGATCCTCGAGAGCGGACTTTACA |
| SHOX | | NM_000451 | 6473 | Homeobox | Seed | short stature homeobox | GAGAGCCAAGTGCCGCAAACAAGAGAATCAGATGCATAAAGGCGTCATCT |
| SHOX2 | | NM_003030 | 6474 | Homeobox | Seed | short stature homeobox 2 | TGAAGCTTGTAGAGTCGCACCTTATGTCAACGTAGGTGCTTTAAGGATGC |
| SIAH1 | | NM_003031 | 6477 | Co-repressor | Seed | seven in absentia homolog 1 (Drosophila) | AAATTTTGCTTACCGACTTGAGCTAAATGGTCATAGGCGACGATTGACTT |
| SIAH2 | | NM_005067 | 6478 | Co-repressor | Seed | seven in absentia homolog 2 (Drosophila) | ACCATACGGAGAAACCAGAACATGAAGACATATGTGAATACCGTCCCTAC |
| SIM1 | | NM_005068 | 6492 | bHLH | Seed | single-minded homolog 1 (Drosophila) | AACAGTCCCACCGCACTATCTCGGATAAGTAGTCCCAATTCGGATCGCAT |
| SIM2 | | NM_005069 | 6493 | bHLH | Seed | single-minded homolog 2 (Drosophila) | ATTATGCCAACCCCCTAGTGCCTAGCAGCTCGTCTCCAGCTAAAAATCCT |
| SIN3B | | AB014600 | 23309 | Co-activator | Seed | SIN3 homolog B, transcriptional regulator (yeast) | ACTCACAAGATGGTGTTCATCGTGAACTCCGAGGACTACATGTACCGTCG |
| SIX1 | | NM_005982 | 6495 | Homeobox | Seed | sine oculis homeobox homolog 1 (Drosophila) | AAAGGGAGAACACCGAAAACAATAACTCCTCCTCCAACAAGCAGAACCAA |
| SIX2 | | NM_016932 | 10736 | Homeobox | Seed | sine oculis homeobox homolog 2 (Drosophila) | AAGGAAAGGGAGAACAACGAGAACTCCAATTCTAACAGCCACAACCCGCT |
| SIX3 | | NM_005413 | 6496 | Homeobox | Seed | sine oculis homeobox homolog 3 (Drosophila) | CCCTAGACCTCTATTCCTCCCACTTCTTGTTGCCAAACTTCGCCGATTCT |
| SIX4 | | NM_017420 | 51804 | Homeobox | Seed | sine oculis homeobox homolog 4 (Drosophila) | CCCTCTACACTACTAAATCCCACTGAGCTAAACCGCGACATTGCCGATAG |
| SIX5 | | X84813 | 1754 | Homeobox | Seed | sine oculis homeobox homolog 5 (Drosophila) | AGGAGGGCCTGCCCTTGTCTCTCTTGCTGGTAACAAAGGTTCCACTTGCT |
| SIX6 | | NM_007374 | 4990 | Homeobox | Seed | sine oculis homeobox homolog 6 (Drosophila) | CTTTCACGGTGGCAACTACCGCGAGCTCTATCATATCCTGGAAAACCACA |
| SLB | | AL110218 | 26160 | Co-repressor | Seed | selective LIM binding factor | TCTGCACAAGTATGTGGCTTTGTATGCAACTCACTTGATCCGGGAGGGTA |
| SLC2A4RG | NT_011333:173 | NM_020062 | 56731 | ZnF-C2H2 | Found | SLC2A4 regulator | TACTACACAGAGCTGGATGTTGGTGTGGACACGCTGACCGACGGGCTGTCC |
| SMARCA1 | | NM_003069 | 6594 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 | ATTCTTTATTATCGGAAGACAATAGGCTATAAGGTTCCAAGGAATCCTGA |
| SMARCA2 | | NM_003070 | 6595 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | AAAATAAAGGAAAGGATTCGTAATCATAAGTACCGGAGCCTAGGCGACCT |
| SMARCA3 | | NM_003071 | 6596 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3 | AGGATCTCCAACTATAATGCTTCTGTCCTTAAAAGCAGGTGGAGTTGGTT |
| SMARCA4 | | NM_003072 | 6597 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | AGTACCAGATCAAAGGTTTGGAGTGGCTGGTGTCCCTGTACAACAACAAC |
| SMARCA5 | | NM_003601 | 8467 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 | ACACAGAAACGTAAAATGGATGGCGCACCTGATGGTCGAGGAAGAAAAA |
| SMARCAD1 | | NM_020159 | 56916 | Co-activator | Seed | SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 | AGACTTCGAACTACATGTACTTTGTAAACAGTACCGACACATTAATAACT |
| SMARCAL1 | | NM_014140 | 50485 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 | CACACCATAAGGTGGTCCTGGACGCAATTACGCAAGAGCTTGAGAGAAAG |
| SMARCB1 | | NM_003073 | 6598 | Other | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 | GGACCAGTTTGAGTGGGACATGTCAGAGAAGGAGAACTCACCAGAGAAGT |
| SMARCC1 | | NM_003074 | 6599 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 | AGTGGGGACTCGTTAATTACCAAGTTGACCCGGAAAGTAGACCCATGGCA |
| SMARCC2 | | NM_003075 | 6601 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 | TGATTGACACTTACCGACTGAACCCCCAAGAGTATCTTACCTCTACCGCC |
| SMARCE1 | | NM_003079 | 6605 | Structural | Seed | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | TGAATCTATGAAGGCCTATCATAATTCCCCCGCGTACCTTGCTTACATAA |
| SMCX | | NM_004187 | 8242 | Structural | Seed | Smcx homolog, X chromosome (mouse) | GTGGTTGGAACCTAAATGTGATGCCGGTGTTGGAACAGTCTGTACTGTGC |
| SMCX | | NM_004187 | 8242 | Jumonji | Seed | Smcx homolog, X chromosome (mouse) | GCCATCACCATTCCAGAGACAAGGCCAGTGTATATGCAAACTGGGGGACT |
| SNAI1 | | NM_005985 | 6615 | ZnF-C2H2 | Seed | snail homolog 1 (Drosophila) | CAGGCTCGAAAGGCCTTCAACTGCAAATACTGCAACAAGGAATACCTCAG |
| SNAI2 | | NM_003068 | 6591 | ZnF-C2H2 | Seed | snail homolog 2 (Drosophila) | CCCTGAAGATGCATATTCGGACCCACACATTACCTTGTGTTTGCAAGATC |
| SNAI3 | | BC041461 | 333929 | ZnF-C2H2 | Seed | snail homolog 3 (Drosophila) | CCACTCAGAGGAGACTCCTCTCCCGGGGAAGGCTTTCATCAGAACAAGAG |
| SNAPC1 | | NM_003082 | 6617 | Other | Seed | small nuclear RNA activating complex, polypeptide 1, 43kDa | ATACACAAGGAAGATAAACCTTTAAGTCTGAGTATGCCTGTAATTACAGA |
| SNAPC2 | | NM_003083 | 6618 | Other | Seed | small nuclear RNA activating complex, polypeptide 2, 45kDa | CTGTGGACTTTGAGAAGATCTACAAGTACTTGTCCTCTGTCTCCCGAAGT |
| SNAPC3 | | NM_003084 | 6619 | Other | Seed | small nuclear RNA activating complex, polypeptide 3, 50kDa | GACTGCTTGGATAGGACATTGTATCCCCTCCTTATCAAGAAGCATTGGCT |
| SNAPC4 | | NM_003086 | 6621 | Other | Seed | small nuclear RNA activating complex, polypeptide 4, 190kDa | AGAGGAACAGTTAATTGAATTAATAGAAAAATATGGTGTCGGTCACTGGG |
| SNAPC5 | | NM_006049 | 10302 | Other | Seed | small nuclear RNA activating complex, polypeptide 5, 19kDa | ACGACCAGCTGAACCGCCTCAAGGTTGAAGAATTAGCCCTCCAATCAATG |
| SNFT | | NM_018664 | 55509 | bZIP | Seed | Jun dimerization protein p21SNFT | GAGTTGCTGCTCAGAGAAGTCGGAAGAAGCAGACCCAGAAGGCTGACAAG |
| SNW1 | | NM_012245 | 22938 | Co-activator | Seed | SKI-interacting protein | CAGAGAGGCCGAGAAGGACCAGTGCAGTTTGAGGAAGATCCTTTTGGTTT |
| SOLH | NT_010552:127 | NM_005632 | 6650 | ZnF-PHD | Found | small optic lobes homolog (Drosophila) | CGGCAGCCTGCGTACCCAGGATAGCGTGCCACCCCTGCACAGGCAGGTCC |
| SOM | NT_004391:39 | NM_021180 | 57822 | Beta-scaffold-grainyhead | Found | sister of mammalian grainyhead | AAGGAAGGCGACCTTCAGAGAGTTCTGCTGTATGTGCGGAGGGAGACTGA |
| SOX1 | | NM_005986 | 6656 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 1 | ATGGGCGCGCTGCAGTACAGCCCCATCTCCAACTCGCAGGGCTACATGAG |
| SOX10 | | NM_006941 | 6663 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 10 | TTCGGCAACGTGGACATTGGTGAGATCAGCCACGAGGTAATGTCCAACAT |
| SOX11 | | NM_003108 | 6664 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 11 | CCGATGAACGCGTTCATGGTATGGTCCAAGATCGAACGCAGGAAGATCAT |
| SOX13 | | NM_005686 | 9580 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 13 | CACTATGTCCCTCGTAGCCTGGACCCCAACATGCCTGTGATCGTCAACAC |
| SOX14 | | NM_004189 | 8403 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 14 | CTACATCCTCTTCCCAGGCATGACCAAGACTGGCATAGACCCTTATTCGT |
| SOX15 | | NM_006942 | 6665 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 15 | CCAGATGGCGCAGCAGAACCCCAAGATGCACAACTCCGAGATCTCCAAGC |
| SOX17 | | NM_022454 | 64321 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 17 | GACCGCACGGAATTTGAACAGTATCTGCACTTCGTGTGCAAGCCTGAGAT |
| SOX18 | | NM_018419 | 54345 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 18 | TCTGTGGGCCGACGTGGACCTCACCGAGTTCGACCAGTACCTCAACTGCA |
| SOX2 | | L07335 | 6657 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 2 | GATTATAAATACCGGCCCCGGCGGAAAACCAAGACGCTCATGAAGAAGGA |
| SOX21 | | NM_007084 | 11166 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 21 | TACTCGCTGCTCGACCTGGGCTCCAAAATGGCAGAGATCTCGTCGTCCTC |
| SOX22 | | NM_006943 | 6666 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 12 | CACATGGCGGATTACCCGGACTACAAGTACCGGCCGCGCAAAAAGAGCAA |
| SOX3 | | NM_005634 | 6658 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 3 | ATGCGACCTGTTCGAGAGAACTCATCAGGTGCGAGAAGCCCGCGGGTTCC |
| SOX30 | | NM_007017 | 11063 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 30 | AGCCTACAGAATCCCATCACTCATCCAGTTGTACATGCCCTTACAGTCGG |
| SOX4 | | NM_003107 | 6659 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 4 | TGGGCAAACGCTGGAAGCTGCTCAAAGACAGCGACAAGATCCCTTTCATT |
| SOX5 | | NM_006940 | 6660 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 5 | ATCTCGCTGGAAAGCTATGACAAACCTAGAGAAACAGCCATATTATGAGG |
| SOX6 | | NM_033326 | 55553 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 6 | CTTAGAGAAGTACCCAAACTATAAATACAAACCCCGACCGAAACGCACCT |
| SOX7 | NT_008010:24 | NM_031439 | 83595 | Beta-scaffold-HMG | Found | SRY (sex determining region Y)-box 7 | TGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAA |
| SOX8 | | NM_014587 | 30812 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 8 | AACATCGACTTCAGCAACGTGGACATCTCGGAGCTCAGCAGCGAGGTCAT |
| SOX9 | | NM_000346 | 6662 | Beta-scaffold-HMG | Seed | SRY (sex determining region Y)-box 9 | AGCAGCGACGTCATCTCCAACATCGAGACCTTCGATGTCAACGAGTTTGA |
| SP1 | | J03133 | 6667 | ZnF-C2H2 | Seed | Sp1 transcription factor | GAAACGCTTCACACGTTCGGATGAGCTACAGAGGCACAAACGTACACACA |
| SP100 | NT_005403:864 | NM_003113 | 6672 | Beta-scaffold-HMG | Found | nuclear antigen Sp100 | CTGCAGCTCATCCCTAAGAAGAGGGTCAGGATCACAGCCACAAGAACCTGA |
| SP2 | | NM_003110 | 6668 | ZnF-C2H2 | Seed | Sp2 transcription factor | ACTGAAAGCCCCCCAACCCCGCTGTCTAAGACTAACAAGAAAGCAAGGAA |
| SP3 | | X68560 | 6670 | ZnF-C2H2 | Seed | Sp3 transcription factor | GCAGGCATTAATGCCGACGGACATTTGATAAACACAGGACAAGCTATGGA |
| SP4 | | NM_003112 | 6671 | ZnF-C2H2 | Seed | Sp4 transcription factor | GAGATTTGAATGCCCGGAATGTTCTAAAAGGTTTATGCGGAGTGATCATC |
| SP7 | NT_009563:27 | NM_152860 | 121340 | ZnF-C2H2 | Found | Sp7 transcription factor | GATGTCTATAAACCCAAGGCAGTGGGAAATAGTGGGCAGCTAGAAGGGAGTGGTG |
| SPI1 | | NM_003120 | 6688 | Trp cluster-Ets | Seed | spleen focus forming virus (SFFV) proviral integration oncogene spi1 | CCCTATGACACGGATCTATACCAACGCCAAACGCACGAGTATTACCCCTA |
| SPIB | | NM_003121 | 6689 | Trp cluster-Ets | Seed | Spi-B transcription factor (Spi-1/PU.1 related) | GTCTTCTATGACCTGGACAGCTGCAAGCATTCCAGCTACCCTGATTCAGA |
| SPIC | NT_009743:37 | NM_152323 | 121599 | Trp Cluster-Ets | Found | likely ortholog of mouse Spi-C transcription factor (Spi-1/PU.1 related) | |
| SRA1 | | AF293024 | 10011 | Co-activator | Seed | steroid receptor RNA activator 1 | CTCATGGTTGACCATGTGACTGAGGTCAGTCAGTGGATGGTAGGAGTTAA |
| SRCAP | | NM_006662 | 10847 | Structural | Seed | Snf2-related CBP activator protein | AAAAGTTTGCAATCATCCAAATCTGTTCGACCCTCGACCGGTTACCTCCC |
| SREBF1 | | NM_004176 | 6720 | bHLH | Seed | sterol regulatory element binding transcription factor 1 | AGGTGACTCAGCTATTCCGGGAACATCTCTTAGAGCGAGCACTGAACTGT |
| SREBF2 | | NM_004599 | 6721 | bHLH | Seed | sterol regulatory element binding transcription factor 2 | TCTCATTTTACCAAAGTGGAACGCATCCCCAAGGCCCTGGAAGTGACAGA |
| SRF | | NM_003131 | 6722 | Beta-scaffold-MADS | Seed | serum response factor (c-fos serum response element-binding transcription factor) | TGTTCCTGACAGCATCATCTGGGACAGTGCAGATCCCTGTTTCAGCAGTT |
| SRY | | NM_003140 | 6736 | Beta-scaffold-HMG | Seed | sex determining region Y | AGAGAGAAATACCCGAATTATAAGTATCGACCTCGTCGGAAGGCGAAGAT |
| SSA1 | NT_028310:75 | NM_003141 | 6737 | Structural | Found | Sjogren syndrome antigen A1 (52 kDa, ribonucleoprotein autoantigen SS-A/Ro) | AGGCCCTACAGGAGCTCATCTCAGAGCTAGATCGAAGGTGCCACAGCTCAG |
| SSRP1 | | NM_003146 | 6749 | Co-activator | Seed | structure specific recognition protein 1 | ATCAAAAACCGAGGATTGAAAGAGGGCATGAACCCAAGCTACGATGAATA |
| SSX1 | | NM_005635 | 6756 | Other | Seed | synovial sarcoma, X breakpoint 1 | |
| SSX2 | | NM_003147 | 6757 | Other | Seed | synovial sarcoma, X breakpoint 2 | |
| SSX3 | | NM_021014 | 10214 | Other | Seed | synovial sarcoma, X breakpoint 3 | |
| SSX4 | | NM_005636 | 6759 | Other | Seed | synovial sarcoma, X breakpoint 4 | CTGCAGACTTCCACGGGAATGATTTTGGTAACGATCGAAACCACAGGAAT |
| SSX5 | | NM_021015 | 6758 | Other | Seed | synovial sarcoma, X breakpoint 5 | GACGACGCCTTTGTACGGAGACCTAGGGTTGGTTCTCAAATACCACAGAA |
| SSX6 | | NM_173357 | 280657 | Other | Seed | synovial sarcoma, X breakpoint 6 | CCCTCTCACTTTTCATGCGTAATAAACGGGCCACAGACTCTCAGAGGAAT |
| SSX7 | | NM_173358 | 280658 | Other | Seed | synovial sarcoma, X breakpoint 7 | |
| SSX8 | | NM_174961 | 280659 | Other | Seed | synovial sarcoma, X breakpoint 8 | |
| SSX9 | | NM_174962 | 280660 | Other | Seed | synovial sarcoma, X breakpoint 9 | TCGAAGGAAGTGCCAGAAGCATCTGGCTTACAGAACGATGGGAAACAGCT |
| ST18 | | NM_014682 | 9705 | ZnF-C3H | Seed | suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein) | ACAGATATGTACAGCAATCTGGAACGGGACTATTCCCCGGAATGCAAAGC |
| STAT1 | | NM_007315 | 6772 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 1, 91kDa | GACGAGGTGTCTCGGATAGTGGGCTCTGTAGAATTCGACAGTATGATGAA |
| STAT2 | | NM_005419 | 6773 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 2, 113kDa | GATGATGACAAGGTGCTCATCTACTCTGTGCAACCGTACACGAAGGAGGT |
| STAT3 | | NM_003150 | 6774 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 3 (acute-phase response factor) | AGCAATACCATTGACCTGCCGATGTCCCCCCGCGCTTTAGATTCATTGAT |
| STAT4 | | NM_003151 | 6775 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 4 | GAAAACCTGAGTCCCACAACAATTGAAACTGCAATGAAGTCTCCTTATTC |
| STAT5A | | NM_003152 | 6776 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 5A | CTGAGCTATCTCATCTATGTGTTTCCTGACCGCCCCAAGGATGAGGTCTT |
| STAT5B | | NM_012448 | 6777 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 5B | ATCAGGTCCCTAGCCGACCGCTTGGGAGACTTGAATTACCTTATCTACGT |
| STAT6 | | NM_003153 | 6778 | Beta-scaffold-STAT | Seed | signal transducer and activator of transcription 6, interleukin-4 induced | CAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATATT |
| SUPT16H | | NM_007192 | 11198 | Other | Seed | suppressor of Ty 16 homolog (S. cerevisiae) | GTGCCTTTTAGGGACTTGGGATTTAACGGAGCTCCCTATAGGAGTACCTG |
| SUPT3H | | NM_003599 | 8464 | Other | Seed | suppressor of Ty 3 homolog (S.cerevisiae) | ATAAAACCCAATGTTGTCGCAATGGAAATCTTAGCATATTTAGCGTATGA |
| SUPT4H1 | | NM_003168 | 6827 | Other | Seed | suppressor of Ty 4 homolog (S.cerevisiae) | GCAGCGAGTCAGTAACTTTAAGCCAGGTGTATATGCGGTGTCAGTCACTG |
| SUPT5H | | NM_003169 | 6829 | Dwarfin | Seed | suppressor of Ty 5 homolog (S.cerevisiae) | CCAACACGCCGTCACGGGCTGAGGAAGAATATGAGTATGCTTTCGATGAT |
| SUPT6H | | NM_003170 | 6830 | Other | Seed | suppressor of Ty 6 homolog (S.cerevisiae) | CTTCCCAACCGTGAATGGACTGTTTAGATGGTTTAAGGATCACTACCAGG |
| SURB7 | | NM_004264 | 9412 | Other | Seed | SRB7 suppressor of RNA polymerase B homolog (yeast) | AGAAGAAAACCATGAAGCTGCTACATGTGTGGAGGATGTTGTTTATCGAG |
| SUV39H1 | NT_011568:277 | NM_003173 | 6839 | Structural | Found | suppressor of variegation 3-9 homolog 1 (Drosophila) | TTGACCTGGACTACGTGGAGGACGTGTACACCGTGGATGCCGCCTACTAT |
| SZF1 | NT_022567:166 | NM_016089 | 51385 | ZnF-C2H2 | Found | KRAB-zinc finger protein SZF1-1 | TGTGTGGGCGAGGCTTTCGTGAAAAGTCAGAGCTCATTAAGCACCAGAGGTGTCA |
| SZFP41 | NT_011192:184 | NM_152279 | 92285 | ZnF-C2H2 | Found | zinc finger protein 41-like | |
| T | | NM_003181 | 6862 | T-box | Seed | T, brachyury homolog (mouse) | CCCTATGCTCATCGGAACAATTCTCCAACCTATTCTGACAACTCACCTGC |
| TADA2L | | NM_001488 | 6871 | Other | Seed | transcriptional adaptor 2 (ADA2 homolog, yeast)-like | CTGGAGCCTATTTAGAATACAAATCTGCTCTATTGAACGAATGTAACAAG |
| TADA3L | | NM_006354 | 10474 | Other | Seed | transcriptional adaptor 3 (ADA3 homolog, yeast)-like | GGAAAATATTATTTCCCCTATGGAGGATTCTCCTATTCCTGACATGTCTG |
| TAF1 | | NM_004606 | 6872 | Other | Seed | TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa | AAGAAGGATAAGGACCAGGATTCTATTACTGGTGAGAAAGTGGACTTCAG |
| TAF10 | | NM_006284 | 6881 | Other | Seed | TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa | CTCAGACCCACGCATAATTCGGCTCATCTCCTTAGCTGCCCAGAAATTCA |
| TAF11 | | NM_005643 | 6882 | Other | Seed | TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa | ATGTCTCAGATTTAACAACAGTTGAAAGGGAAGACTCATCATTACTTAAT |
| TAF12 | | NM_005644 | 6883 | Other | Seed | TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa | AAATTACAGGACTTAGTAAGAGAAGTGGATCCTAATGAGCAGTTGGATGA |
| TAF13 | | NM_005645 | 6884 | Other | Seed | TAF13 RNA polymerase II, TATA box binding protei (TBP)-associated factor, 18kDa | CAGGGTTAAAGACTTGCTTACTATGAATGAAGAATTGAAACGAGCTAGAA |
| TAF15 | | NM_003487 | 8148 | Other | Seed | TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa | AGATGACCGTCGTGATGTGAGTAGGTATGGAGAAGATAATAGAGGATATG |
| TAF1A | | NM_005681 | 9015 | Other | Seed | TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa | GAAGGATTTTGCTCAGACAACAAGTGCTTGTTTAAGTTTTATCCAAGAAG |
| TAF1B | | L39061 | 9014 | Other | Seed | TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa | GTGAAAAGCCACTCTACTACTCATTTGTCGACAAACCAGTAGCATATAAA |
| TAF1C | | NM_005679 | 9013 | Other | Seed | TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa | CCTACTCTTCATCTCGTCTGTACCCAGTTCTCTCTCTACCTAGTGGACGA |
| TAF2 | | NM_003184 | 6873 | Other | Seed | TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa | CCTGTACCCTATGTAAGGCATAAGATTCTCAACATGTTGACTAAGAACCC |
| TAF3 | | AJ292190 | 83860 | Other | Seed | TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa | ATGCTGCCATCTTTGTTGCCAGTGCTTCCGGAAAAACTGTTTGAGGAGAA |
| TAF4 | | NM_003185 | 6874 | Other | Seed | TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa | GAGATCCTGATGAGGGCAGCAAAGTCTCGGTCAAGACAAGAAGATCCAGA |
| TAF4B | | Y09321 | 6875 | Other | Seed | TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa | GAGTTACAGCAATTGGAACTTGCACAGATACAGCATAGAGACGCTAATCT |
| TAF5 | | NM_006951 | 6877 | Other | Seed | TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa | GGCATCAGGTTCAATGGATAATACAGTTCGATTATGGGATGCTATCAAAG |
| TAF5L | | NM_014409 | 27097 | Co-activator | Seed | TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa | CACCAAGTAGACGTGTCCCGCATCCATTTGGCTTGTGATATTCTGGAGGA |
| TAF6 | | NM_005641 | 6878 | Other | Seed | TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa | TGATGCGTATGGTGAAAGCGCTGATGGACAACCCCACGCTCTATCTAGAA |
| TAF6L | | NM_006473 | 10629 | Co-activator | Seed | TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa | AGGACTTGCAGACGAACTCCAAGATTGGGGCACTCCTGCCTTACTTTGTT |
| TAF7 | | NM_005642 | 6879 | Other | Seed | TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa | GGAGCAACTCAGCTCTTTGCAAGAGGAGCTAGAATCACTCCTAGAGAAGT |
| TAF9 | | NM_003187 | 6880 | Other | Seed | TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa | AGAATAACAGTCCCGCGGTTAAGTGTTGGTTCAGTTACTAGCAGACCAAG |
| TAL1 | | NM_003189 | 6886 | bHLH | Seed | T-cell acute lymphocytic leukemia 1 | ATGAGATGGAGATTACTGATGGTCCCCACACCAAAGTTGTGCGGCGTATC |
| TAL2 | | NM_005421 | 6887 | bHLH | Seed | T-cell acute lymphocytic leukemia 2 | AGGAAGATCTTCACAAATACCAGGGAGCGGTGGAGGCAGCAGAATGTCAA |
| TBP | | NM_003194 | 6908 | Other | Seed | TATA box binding protein | AAGACCATTGCACTTCGTGCCCGAAACGCCGAATATAATCCCAAGCGGTT |
| TBPL1 | | NM_004865 | 9519 | Other | Seed | TBP-like 1 | GCTGTGTGCTATCGGATAAAATCTCTAAGAGCTACATTACAGATTTTTTC |
| TBR1 | | NM_006593 | 10716 | T-box | Seed | T-box, brain, 1 | GGATTTCGGGATAATTATGACACGATCTACACCGGCTGTGACATGGACCG |
| TBX1 | | NM_005992 | 6899 | T-box | Seed | T-box 1 | TTCAAAACCTTTGTGTTCGAGGAGACACGATTCACCGCGGTCACTGCCTA |
| TBX10 | | AF033579 | 6912 | T-box | Seed | T-box 10 | ATGCCCAGGAGAACTTCAAGTCCTTCATCTTCACAGAGACCCAGTTCACA |
| TBX15 | | NM_152380 | 6913 | T-box | Seed | T-box 15 | AGTTACGGCCTATCAGAATCAGCAGATTACCAGATTAAAAATTGACCGAA |
| TBX18 | | AJ010278 | 9096 | T-box | Seed | T-box 18 | ATCTTTCTCCCATCAAGCCTGTTCCATCCGGGGAAGGAGTAAAGGCATTC |
| TBX19 | | NM_005149 | 9095 | T-box | Seed | T-box 19 | TGAATTTGATAGAAAGCTCAAGCAATAATCTGCAAGTTTTCTCGGGACCT |
| TBX2 | | NM_005994 | 6909 | T-box | Seed | T-box 2 | TGCTGATGGACATTGTAGCCGCTGACGATTGCCGCTATAAGTTCCACAAC |
| TBX20 | | AJ237589 | 57057 | T-box | Seed | T-box 20 | TGCCTACCAGAATCAACTGATAACGAAGCTGAAAATAGATAGCAATCCTT |
| TBX21 | | NM_013351 | 30009 | T-box | Seed | T-box 21 | ATTTGGGAAACTAAAGCTCACAAACAACAAGGGGGCGTCCAACAATGTGA |
| TBX22 | | NM_016954 | 50945 | T-box | Seed | T-box 22 | ATCTAGACTGATAAGTGGTTCCAACCATCTTAAAGTGAATGACGACAGTC |
| TBX3 | | NM_005996 | 6926 | T-box | Seed | T-box 3 (ulnar mammary syndrome) | AAACTCCCTTATAGTACATTTCGGACATACTTGTTCCCCGAAACTGAATT |
| TBX4 | | NM_018488 | 9496 | T-box | Seed | T-box 4 | CACCCTCGCCACATCTAAATGCTGCCAATGAGTTTCTCTACTCTCAAACC |
| TBX5 | | NM_000192 | 6910 | T-box | Seed | T-box 5 | AAATTCCATGCACAAATACCAGCCTAGATTACACATCGTGAAAGCGGATG |
| TBX6 | | NM_004608 | 6911 | T-box | Seed | T-box 6 | CACATTCATCTCCGTGACAGCCTACCAGAACCCACAGATCACACAACTGA |
| TCEAL1 | | NM_004780 | 9338 | ZnF-Other | Seed | transcription elongation factor A (SII)-like 1 | AAAGAAAGGTTGGCTCGTTCTCGCCCGCAATTTAGAGGGGACATACATGG |
| TCERG1 | | NM_006706 | 10915 | Other | Seed | transcription elongation regulator 1 (CA150) | TATAGATCCAAAAAATTAATCCAAGAATCGGATCAGCACCTGAAAGATGT |
| TCF1 | | NM_000545 | 6927 | Homeobox | Seed | transcription factor 1, hepatic; LF-B1, hepatic nuclear factor (HNF1), albumin proximal factor | TACAACTGGTTTGCCAACCGGCGCAAAGAAGAAGCCTTCCGGCACAAGCT |
| TCF12 | | NM_003205 | 6938 | bHLH | Seed | transcription factor 12 (HTF4, helix-loop-helix transcription factors 4) | CGGATGGCTAACAATGCCAGAGAACGCTTACGCGTGCGGGATATTAATGA |
| TCF15 | | NM_004609 | 6939 | bHLH | Seed | transcription factor 15 (basic helix-loop-helix) | AAGCTGTCCAAGATCGAGACGCTGCGCCTGGCGTCCAGCTACATCGCGCA |
| TCF19 | | NM_007109 | 6941 | Other | Seed | transcription factor 19 (SC1) | AACGCAATCGGAGGAAATCTGTTCACCGAGTGTTGGCGGAACTGGATGAT |
| TCF2 | | NM_000458 | 6928 | Homeobox | Seed | transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor | AGCATCAGTACACTCACCAACATGTCTTCAAGTAAACAGTGTCCTCTACA |
| TCF20 | | U19345 | 6942 | Other | Seed | transcription factor 20 (AR1) | TTGCTACATGAGGAGAACTTCTCGGTGAGGTGCCCTAAGCACAAGGTGAG |
| TCF21 | | NM_003206 | 6943 | bHLH | Seed | transcription factor 21 | AGATCCTGGCTAACGACAAATACGAGAACGGGTACATTCACCCGGTCAAC |
| TCF3 | | M31523 | 6929 | bHLH | Seed | transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) | CGGAACCTGAATCCCAAAGCAGCCTGTTTGAAACGGCGAGAAGAGGAAAA |
| TCF-3 | | NM_031283 | 83439 | Beta-scaffold-HMG | Seed | HMG-box transcription factor TCF-3 | GTCTAATAAAGTTCCTGTCGTTCAGCACCCGCATCACATGCATCCGCTGA |
| TCF4 | | NM_003199 | 6925 | bHLH | Seed | transcription factor 4 | CTTCACAGTAGTGCCATGGAGGTACAGACAAAGAAAGTTCGAAAAGTTCC |
| TCF7 | | NM_003202 | 6932 | Beta-scaffold-HMG | Seed | transcription factor 7 (T-cell specific, HMG-box) | AAGGTCATTGCAGAGTGCACACTTAAGGAGAGCGCTGCCATCAACCAGAT |
| TCF7L1 | | X62870 | 6933 | Beta-scaffold-HMG | Seed | transcription factor 7-like 1 (T-cell specific, HMG-box) | GCCATTAACCAGATCCTTGGAAGAAAGGTAAGACCTGCCCTCTCCCTCCA |
| TCF7L2 | | NM_030756 | 6934 | Beta-scaffold-HMG | Seed | transcription factor 7-like 2 (T-cell specific, HMG-box) | CATCCGCTAGGATGGTTAGTACCACAGCAAGGTCAACCAGTGTACCCAAT |
| TCF8 | | NM_030751 | 6935 | ZnF-C2H2 | Seed | transcription factor 8 (represses interleukin 2 expression) | CAAGCAAGCAGCTTAGGACAAAAAGTAGGCGAGAGTAGTGAGCAAGTGTC |
| TCFL1 | | NM_005997 | 6944 | Other | Seed | transcription factor-like 1 | CTGGAGACATATGAGCGGCTCGAGGCTGATAAAAAGAAGCAGGTTCATAA |
| TCFL4 | | NM_013383 | 6945 | bHLH | Seed | transcription factor-like 4 | TTGTAGAAAGCACCCGCAAGGGGAGTGTAGTGTCCAGAGCTAATAGCATC |
| TCFL5 | | NM_006602 | 10732 | bHLH | Seed | transcription factor-like 5 (basic helix-loop-helix) | GAATTTGAGAGCGTATTTTGCGGTAAAACTGGCCGAAGGCTAAAGCTGAC |
| TEAD1 | | NM_021961 | 7003 | TEA | Seed | TEA domain family member 1 (SV40 transcriptional enhancer factor) | GGCATGCCAACCATTCTTACAGTGACCCATTGCTTGAATCAGTGGACATT |
| TEAD2 | | NM_003598 | 8463 | TEA | Seed | TEA domain family member 2 | TTCCAGATGTGAAGCCATTCTCACAGACACCGTTCACCTTGTCACTGACT |
| TEAD3 | | NM_003214 | 7005 | TEA | Seed | TEA domain family member 3 | CTCGGAAGAAGGTGCGGGAGTACCAGGTTGGCATCAAGGCCATGAACCTG |
| TEAD4 | | NM_003213 | 7004 | TEA | Seed | TEA domain family member 4 | TGAGACAGAGTATGCTCGCTATGAGAATGGACACTACTCTTACCGCATCC |
| TEF | | NM_003216 | 7008 | bZIP | Seed | thyrotrophic embryonic factor | CAAGTGCAAGACCATCGTGTCCAAGTATGAGACCAAATACGGGCCCTTGT |
| TEL2 | | NM_016135 | 51513 | Trp cluster-Ets | Seed | ets transcription factor TEL2 | AAGATGTCTCGTGCCCTGCGCCACTATTATAAGCTTAATATCATTAAGAA |
| TEX27 | | NM_021943 | 60685 | ZnF-AN1 | Seed | testis expressed sequence 27 | GAATTGGGATCGTGTCGCTGCGGTTATGTGTTCTGTATGTTACATCGCCT |
| TFAM | | NM_012251 | 7019 | Beta-scaffold-HMG | Seed | transcription factor A, mitochondrial | TCAAGATGCTTATAGGGCGGAGTGGCAGGTATATAAAGAAGAGATAAGCA |
| TFAP2A | | NM_003220 | 7020 | AP-2 | Seed | transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) | CACGGACAACAACGCCAAAAGCAGTGACAAAGAGGAGAAGCACAGAAAGT |
| TFAP2B | | NM_003221 | 7021 | AP-2 | Seed | transcription factor AP-2 beta (activating enhancer binding protein 2 beta) | TTGTAAAGAATTTACGGATCTACTGGCGCAGGACCGGACACCGATAGGGA |
| TFAP2BL1 | | NM_172238 | 83741 | AP-2 | Seed | transcription factor AP-2 beta (activating enhancer binding protein 2 beta)-like 1 | GTCACCCCCGACGCCTACTCTCTGAACTCTCTCCACCACTCGCAACAGTA |
| TFAP2C | | NM_003222 | 7022 | AP-2 | Seed | transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) | CCAGCTGATTCTAACAAAACCCTGGAGAAAATGGAGAAACACAGGAAATA |
| TFAP4 | | NM_003223 | 7023 | bHLH | Seed | transcription factor AP-4 (activating enhancer binding protein 4) | TCCTCGGTCATCAACTCTGTTTCCACATCCCGGCAAAATCTGGACACCAT |
| TFB1M | | NM_016020 | 51106 | Other | Seed | transcription factor B1, mitochondrial | CGCCTCTCTGTTATGGCTCAGTACCTCTGCAATGTTCGACACATCTTTAC |
| TFB2M | | NM_022366 | 64216 | Other | Seed | transcription factor B2, mitochondrial | TTAAAGCACTGTTTTGGGAGGCGCAGCGCCACTGTAATAGACCACTTACG |
| TFCP2 | | NM_005653 | 7024 | Beta-scaffold-grainyhead | Seed | transcription factor CP2 | GGAGACTCAAATGGTACTTTCTTCGTTTACCATGCTATCTATCTAGAAGA |
| TFCP2L1 | | NM_014553 | 29842 | Beta-scaffold-grainyhead | Seed | transcription factor CP2-like 1 | AGAGACGCTGACCTACCTCAACCAAGGTCAGTCTTATGAAATCCGACTAC |
| TFCP2L2 | | NM_014552 | 29841 | Beta-scaffold-grainyhead | Seed | transcription factor CP2-like 2 | TCAGTACAACTCCACTGCCTCACGTTAGCGGGAGCGCACCTGAAGAGTAC |
| TFCP2L3 | NT_008046:768 | NM_024915 | 79977 | Beta-scaffold-grainyhead | Found | transcription factor CP2-like 3 | GGCCTGATGGAAGCGATATCTGAGAAATATGGGCTGCCCGTGGAGAAGAT |
| TFDP1 | | NM_007111 | 7027 | E2F | Seed | transcription factor Dp-1 | CAACAGGAAAGGAGAGAAGAATGGCAAGGGCCTACGGCATTTCTCCATGA |
| TFDP2 | | NM_006286 | 7029 | E2F | Seed | transcription factor Dp-2 (E2F dimerization partner 2) | GTGCCACCTTACCCCAGTCAAGTGTAAACCAAGGGTTATGCTTGGATGCA |
| TFE3 | | NM_006521 | 7030 | bHLH | Seed | transcription factor binding to IGHM enhancer 3 | CAATCACAACCTAATTGAGCGTCGCAGGCGATTCAACATTAACGACAGGA |
| TFEB | | BC006225 | 7942 | bHLH | Seed | transcription factor EB | AATCACAACTTAATTGAAAGGAGACGAAGGTTCAACATCAATGACCGCAT |
| TFEC | | NM_012252 | 22797 | bHLH | Seed | transcription factor EC | AGAAATTAGAGCAGGCTAACAGGCGACTTCTACTTCGGATTCAGGAACTA |
| TGFB1I1 | | NM_015927 | 7041 | Co-activator | Seed | transforming growth factor beta 1 induced transcript 1 | TGGATAGACTGATGGCCTCACTCCCTGACTTCCGCGTTCAAAACCATCTT |
| TGIF | | NM_003244 | 7050 | Homeobox | Seed | TGFB-induced factor (TALE family homeobox) | CCCAGAGGACACTTGTAAATCTGGACCAAGTACGAATACACAGAGTGGTC |
| THG-1 | | AJ133115 | 81628 | bZIP | Seed | TSC-22-like | AGCGACGATGATAGTGGCTCCGGAAGCCTGGTTGGCATTGACAACAAAAT |
| THRA | | NM_003250 | 7067 | NHR | Seed | thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) | GTCAGGGTATATCCCTAGTTACCTGGACAAAGACGAGCAGTGTGTCGTGT |
| THRAP4 | | NM_014815 | 9862 | Co-activator | Seed | thyroid hormone receptor associated protein 4 | CCTTCGAAGTTGATGCGACTGCTGAGCTCTAATGAGGACGATGCCAACAT |
| THRB | | NM_000461 | 7068 | NHR | Seed | thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian) | AAATGAACAGTCGTCGCCACATCTCATCCAGACCACTTGGACTAGCTCAA |
| TIEG | | NM_005655 | 7071 | ZnF-C2H2 | Seed | TGFB inducible early growth response | GCAGATGGAAGTGAGCAAGCTAAATGACATTGCTCTACCTCCAACCCCTG |
| TIEG2 | | NM_003597 | 8462 | ZnF-C2H2 | Seed | TGFB inducible early growth response 2 | AAGACCTACTTCAAAAGTTCCCACCTTAAGGCCCATCTTCGCACTCACAC |
| TIF1 | | NM_003852 | 8805 | Structural | Seed | transcriptional intermediary factor 1 | AGGACCTGTTACTATGACTAGTGTACACCCCCCAATACGTTCACCTAGTG |
| TIMELESS | | NM_003920 | 8914 | Other | Seed | timeless homolog (Drosophila) | GGACTACCTGAAACGCTTTGCATGTTCAACTGTCGTTCGAGCCTATGTGC |
| TIP120A | | NM_018448 | 55832 | Co-activator | Seed | TBP-interacting protein | TTTCCTGATTAAGGGATCTGTGCTGGGGAACAAAGCTTTTGCAGTACCTT |
| TITF1 | | NM_003317 | 7080 | Homeobox | Seed | thyroid transcription factor 1 | ATGTCGATGAGTCCAAAGCACACGACTCCGTTCTCAGTGTCTGACATCTT |
| TIX1 | | AB007855 | 23051 | Homeobox | Seed | triple homeobox 1 | AAGAACGGCCAACTCAAATGGTACGAAGACTATAAGCGAGGCAACTTCCC |
| TIZ | NT_033317:106 | NM_138330 | 171392 | ZnF-C2H2 | Found | TRAF6-inhibitory zinc finger protein | |
| TLX1 | | NM_005521 | 3195 | Homeobox | Seed | T-cell leukemia, homeobox 1 | ATGGAGAGTAACCGCAGATACACAAAGGACAGGTTCACAGGTCACCCCTA |
| TLX2 | | NM_001534 | 3196 | Homeobox | Seed | T-cell leukemia, homeobox 2 | ACACAACCTCCCACACCACGAAGCAATCAGCTTCGGCATCGATCAGATCC |
| TLX3 | | NM_021025 | 30012 | Homeobox | Seed | T-cell leukemia, homeobox 3 | AGCCTGACCCGCTCTGTCTGCACAACTCGTCACTCTTTGCTCTGCAGAAT |
| TMF1 | | NM_007114 | 7110 | Other | Seed | TATA element modulatory factor 1 | ACTTCGATTAGATCTCGAAGATGTAAAAAATATGTACAAAACTCAAATAG |
| TNRC11 | | NM_005120 | 9968 | Co-activator | Seed | trinucleotide repeat containing 11 (THR-associated protein, 230 kDa subunit) | CAGATTGTGAATAATTGGCGAGATGACCAGTACTTAGATGATTGCAAACC |
| TNRC17 | | U80752 | 27321 | Other | Seed | trinucleotide repeat containing 17 | TTCCCCATTCCAGTGGATCAGCGCTGTTATTGCCAGCTCAGTATCTACGC |
| TNRC18 | | U80753 | 27320 | Other | Seed | trinucleotide repeat containing 18 | TCAAACTGGACCACGAGGGTGTCACGTCACCCAAAAGCAAGAAGGCTAAA |
| TNRC21 | | U80756 | 27318 | Other | Seed | trinucleotide repeat containing 21 | CCTGGAGTACAGACAAACCAAGCTCTGGGTCCCAAGCCCCAGGGCCTTAT |
| TNRC3 | | NM_005878 | 10292 | Other | Seed | trinucleotide repeat containing 3 | CTTCCACTGTAGTGGGGTCTAATTGCCTGCAGAAAACCTCTTTACAACAT |
| TNRC4 | | NM_007185 | 11189 | Other | Seed | trinucleotide repeat containing 4 | CCACCAATCAAAGCAAATGTTTTGGCTTTGTGAGTTTCGACAATCCGGCC |
| TNRC5 | | NM_006586 | 10695 | Other | Seed | trinucleotide repeat containing 5 | GGAGTCAAATACACCAAGTCGGACTTGCGGTTAATCGAAGTCACTGAGAC |
| TNRC6 | | U80739 | 27327 | Other | Seed | trinucleotide repeat containing 6 | AGCAACCAGCACTAATAATAATGCCAAGCGAGCTACAGCCAACAATCAGC |
| TNRC8 | | U80740 | 27325 | Other | Seed | trinucleotide repeat containing 8 | TCTCTCCCCCACCCAACTCCATTCCCCACAGCAAGAAAGGGAGTGTTTTT |
| TNRC9 | | U80736 | 27324 | Other | Seed | trinucleotide repeat containing 9 | ACCAGTCGCAAATACAGTCTCAGACACAGACTCAAGTATTATCGCAGGTC |
| TONDU | | NM_016267 | 51442 | Other | Seed | TONDU | TCCCGGCTCAGTTCACTATAAGAAACTATATGTATCTCGTGGATCTGCCA |
| TOX | | NM_014729 | 9760 | Beta-scaffold-HMG | Seed | thymus high mobility group box protein TOX | AAGCACAGTGCCGTGTTGTTTACAGCTTTTCTAGAGCAGCTGTGCGACCA |
| TP53 | | NM_000546 | 7157 | Beta-scaffold-p53 | Seed | tumor protein p53 (Li-Fraumeni syndrome) | TCCCGCCATAAAAAACTCATGTTCAAGACAGAAGGGCCTGACTCAGACTG |
| TP53BP2 | NT_004525:42 | NM_005426 | 7159 | Co-repressor | Found | tumor protein p53 binding protein, 2 | AAATCGAATGGTGGTGGGCGCGCCTTAATGATAAGGAGGGATATGTTCCAC |
| TP63 | | NM_003722 | 8626 | Beta-scaffold-p53 | Seed | tumor protein p63 | CACCCCGAGATGAGTGGAATGACTTCAACTTTGACATGGATGCTCGCCGC |
| TP73 | | NM_005427 | 7161 | Beta-scaffold-p53 | Seed | tumor protein p73 | CAAACTGCATCGAGTATTTCACCTCCCAAGGGTTACAGAGCATTTACCAC |
| TRAP150 | | NM_005119 | 9967 | Co-activator | Seed | thyroid hormone receptor-associated protein, 150 kDa subunit | GAGAGATCTTAAACGAGGTAAATCGAGAGAATCAGTGGATTCCCGAGACT |
| TRAP95 | | NM_005481 | 10025 | Co-activator | Seed | thyroid hormone receptor-associated protein, 95-kD subunit | CCAAGATCACCGACGTCGACATTGACAAGGTCATGATCAACCTCAAGACG |
| TRERF1 | NT_007592:3400 | NM_018415 | 55809 | ZnF-C2H2 | Found | transcriptional regulating factor 1 | CCGCCCCTGCAGGCCCTGGGCCAGCCCTCAGGCTCCTTCATCTGTGAAATGC |
| TRIM10 | | NM_006778 | 10107 | Structural | Seed | tripartite motif-containing 10 | CAGCGGCTCCCTATAGGGAACAAATCCATAAGTGTCTTAAATGTCTAAGA |
| TRIM14 | NT_033216:170 | NM_014788 | 9830 | Structural | Found | tripartite motif-containing 14 | AGGTACCTTGTTGAAAACCAGCCCCTCACCAGAGCGATCGCTATTGCTGAAAT |
| TRIM15 | | NM_033229 | 89870 | Structural | Seed | tripartite motif-containing 15 | CCCTTTCTTTGCCGTCTGGAAAAAAGGTTCCTGCCTTACGCTGAAAGGCT |
| TRIM16 | NT_010718:517 | NM_006470 | 10626 | Structural | Found | tripartite motif-containing 16 | |
| TRIM17 | NT_004908:93 | NM_016102 | 51127 | Structural | Found | tripartite motif-containing 17 | TTCCCGGACAGATTGAAGTGCTAAGAGGCTTTCTAGAGGATGTGGTGCCTGATG |
| TRIM22 | | NM_006074 | 10346 | Structural | Seed | tripartite motif-containing 22 | GTTTACTCCAGATATAGACCTCAATATGGCTACTGGGTTATAGGATTACA |
| TRIM26 | | NM_003449 | 7726 | Structural | Seed | tripartite motif-containing 26 | CACCGTGACTTTCACCAACGCAGAGTCACAGGAACTCATCTACACCTTCA |
| TRIM28 | | NM_005762 | 10155 | Structural | Seed | tripartite motif-containing 28 | ATTCAACAAGTTAACTGAGGACAAGGCAGACGTGCAGTCCATCATCGGCC |
| TRIM29 | NT_033899:65 | NM_012101 | 23650 | Structural | Found | tripartite motif-containing 29 | GGCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCAT |
| TRIM3 | | NM_006458 | 10612 | ZnF-Other | Seed | tripartite motif-containing 3 | CCATTTTGTGGCTGTAAGCAACAAGAATGAAGTTGTAGTAACGGACTTCC |
| TRIM31 | NT_034873:26 | NM_007028 | 11074 | Structural | Found | tripartite motif-containing 31 | GATTTCTGGTCAAGGAGCGAGCTCTCAGGATACGAAGACATTTGACGTTGCG |
| TRIM33 | | NM_015906 | 51592 | Structural | Seed | tripartite motif-containing 33 | ACTCTGATGAAGACTTTATACAGCCCCGGCAGAAAACGCCTAAAGTCAGA |
| TRIM34 | NT_035080:27a | NM_021616 | 53840 | Structural | Found | tripartite motif-containing 34 | TCCCGCCATATGAAGTATGTTGTTAGAAGATGTGCAAATCGTCAAAATCTTTACA |
| TRIM35 | NT_007988:5 | NM_015066 | 23087 | Structural | Found | tripartite motif-containing 35 | GAGTTTGATAAGCTTCGCGAGTTCTTGAGAGTGGAGGAGCAGGCCATTCTGGAT |
| TRIM38 | | NM_006355 | 10475 | ZnF-Other | Seed | tripartite motif-containing 38 | TTCCTTCTCTGATACTCTCCGGCCCTATTTCCAGGTTTATCAATATTCTC |
| TRIM39 | NT_033951:12 | NM_021253 | 56658 | Structural | Found | tripartite motif-containing 39 | GATACTTTTACTGAGAAACTTTGGCCCCTCTTCTACCCAGGCATCCGGGCTGGA |
| TRIM4 | NT_007933:2024 | NM_033017 | 89122 | Structural | Found | tripartite motif-containing 4 | GGTGTGTCGGGAGGACGTCATGGGAATTACTGATCGTTCAAAAATGTCCC |
| TRIM40 | NT_007592:1918 | NM_138700 | 135644 | Structural | Found | tripartite motif-containing 40 | CTATGTGTGGAATGCCTGGTGTCCCCTGAACACATGTCTCATCATGAACTGA |
| TRIM41 | NT_006519:206 | NM_201627 | 90933 | Structural | Found | tripartite motif-containing 41 | GGACAACATGGACTATGTGTGGGAGGAGGAGGACGAGGAGGAAGACCTGG |
| TRIM47 | NT_033292:11 | NM_033452 | 91107 | Structural | Found | tripartite motif-containing 47 | CTCCCCCATTGACCCCTTCCAGAGCCGCCTGGACAGTCACTTTGCGGGGC |
| TRIM48 | NT_033903:1 | NM_024114 | 79097 | Structural | Found | tripartite motif-containing 48 | |
| TRIM5 | NT_035080:27b | NM_033034 | 85363 | Structural | Found | tripartite motif-containing 5 | TCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCC |
| TRIM50A | NT_007758:1088 | NM_178125 | 135892 | Structural | Found | tripartite motif protein 50A | GCTCTACCTGCACTATGAGCAGGGCGAACTCACCTTCTTCGATGCCGACC |
| TRIM52 | NT_006519:210 | NM_032765 | 84851 | Structural | Found | tripartite motif-containing 52 | GTGCCGAAAGAGCTTTACACGTCGCAGCTTTCGTCCCAACTTGCAGCTGG |
| TRIM56 | NT_007933:2242 | NM_030961 | 81844 | Structural | Found | tripartite motif-containing 56 | ATGGCAGGTACCTGGTCGTGTCCCTCAGTAACGGGACCATCCACATCTTT |
| TRIM6 | NT_035080:27c | NM_058166 | 117854 | Structural | Found | tripartite motif-containing 6 | GACAAGTGAGGTTTGTGGGAGCTAAAGTATCTGGACCTTCCTGTCTGGAAAAGCA |
| TRIM8 | NT_030059:1077 | NM_030912 | 81603 | Structural | Found | tripartite motif-containing 8 | ACTAAGATCGGCCACCTGAACTCCAAGCTCTTCCTGAACGAAGTGGCCAA |
| TRIM9 | NT_025892:2018 | NM_015163 | 114088 | Structural | Found | tripartite motif-containing 9 | TTGGGCAATGTATGTGGACAATAACCGGAGCTGGTTCATGCACAACAACTC |
| TRIP10 | | NM_004240 | 9322 | Co-activator | Seed | thyroid hormone receptor interactor 10 | TATGTAAAGTTCGTGAAAGAACGCACCGAAGTGGAACAGGCTTACGCCAA |
| TRIP11 | | NM_004239 | 9321 | Co-activator | Seed | thyroid hormone receptor interactor 11 | TTATCACGTATCATTCGAGAAAAAGACATCGAAATAGATGCACTAAGTCA |
| TRIP13 | | NM_004237 | 9319 | Co-activator | Seed | thyroid hormone receptor interactor 13 | GAAATTGACAATTAGACTTTCAAGCAGGTACCGATATGGCCAATTAATTG |
| TRIP15 | | NM_004236 | 9318 | Co-activator | Seed | thyroid receptor interacting protein 15 | TGGTGCACGATATACTGCACTAGATAAATGGACCAACCAACTAAATTCTC |
| TRIP4 | | NM_016213 | 9325 | Co-activator | Seed | thyroid hormone receptor interactor 4 | GAAGCAATTTAAGGAGCAGTTTCCAGACATCAGTCAAGAATCTGATTCTC |
| TRIP6 | | L40374 | 7205 | Co-activator | Seed | thyroid hormone receptor interactor 6 | TCAGGACTGACTGCTGAGTCTTCCATGAAGTACCTGCTGGGTTCTCAGTT |
| TRIP8 | NT_008583:38 | NM_004241 | 604503 | Jumonji | Found | thyroid hormone receptor interactor 8 | TGGCCTCTCATTTGCCAGGATTTTTTGTACGTCCTGATCTAGGACCCAGGTTG |
| TRIP-Br2 | | NM_014755 | 9792 | Co-activator | Seed | transcriptional regulator interacting with the PHS-bromodomain 2 | GGGATAACAAGTTTTGGAAGAGAAATGCAGGCCATATGTGCGCATGACCG |
| TRPS1 | | NM_014112 | 7227 | ZnF-Other | Seed | trichorhinophalangeal syndrome I | TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAACGCGTGTGG |
| TSC22 | | NM_006022 | 8848 | bZIP | Seed | transforming growth factor beta-stimulated protein TSC-22 | GAAATCCCAATGGTGTAGACCAGTGGCGATGGATCTAGGAGTTTACCAAC |
| TUB | | NM_003320 | 7275 | Tubby | Seed | tubby homolog (mouse) | TCCCGCTCTGCATTGCCTGAAAAAACTGGTATGTTGCACGTATGCTTTTG |
| TULP1 | | NM_003322 | 7287 | Tubby | Seed | tubby like protein 1 | GCGCCCCAGTCACTTCCTGTCCGGGAGCAGTAGTCATTGTTGTTTTAACC |
| TULP2 | | NM_003323 | 7288 | Tubby | Seed | tubby like protein 2 | GCTCCAGGCCTTCAGCATCTGCTTGTCCAGTTTCAATTAGAAGCTGGCTG |
| TULP3 | | NM_003324 | 7289 | Tubby | Seed | tubby like protein 3 | GATCCAGTTGATTTATCTCGTGAAGGAGAAAGTTATGTCGGCAAGCTTAG |
| TULP4 | | NM_020245 | 56995 | Tubby | Seed | tubby like protein 4 | TCAGCATCCTGCTGGTTTTACTTTCCAAGCAAGATCTGTTGCGACTCCCA |
| TWIST | | NM_000474 | 7291 | bHLH | Seed | Twist | ATCGACTTCCTCTACCAGGTCCTCCAGAGCGACGAGCTGGACTCCAAGAT |
| TZFP | | NM_014383 | 27033 | ZnF-BTB/POZ | Seed | testis zinc finger protein | GGAAAGAGGTTTTCACTCAAGCATCAGATGGAGACGCACTACCGAGTCCA |
| UBP1 | | NM_014517 | 7342 | Beta-scaffold-grainyhead | Seed | upstream binding protein 1 (LBP-1a) | CAGAAAAAGTCCAGCAAGCGGACTTTGCCAGCAGACTACGGTGATTCTCT |
| UBTF | | NM_014233 | 7343 | Beta-scaffold-HMG | Seed | upstream binding transcription factor, RNA polymerase I | GAGCAGCGGAAGGAGTACGAGGAGATCATGAGAGACTATATCCAGAAGCA |
| UHRF1 | | NM_013282 | 29128 | ZnF-PHD | Seed | ubiquitin-like, containing PHD and RING finger | AATTTTTTCACATACACGGGTAGTGGTGGTCGAGATCTTTCCGGCAACAA |
| URF2 | NT_008413:704 | NM_152306 | 115426 | ZnF-PHD | Found | ubiquitin-like, containing PHD and RING finger domains 2 | GGAATTCATGGTCGAAGTAATGATGGGGCTTATTCTCTTGTACTGGCTGGTGGA |
| USF1 | | NM_007122 | 7391 | bHLH | Seed | upstream transcription factor 1 | TCAGTTGCGGCACCACGGATTAGAGGTCGTCATCAAGAATGACAGCAACT |
| USF2 | | NM_003367 | 7392 | bHLH | Seed | upstream transcription factor 2, c-fos interacting | TGGATCGTCCAGCTTTCGAAAATCATTCCAGACTGTAACGCAGACAACAG |
| UTF1 | | NM_003577 | 8433 | bZIP | Seed | undifferentiated embryonic cell transcription factor 1 | AGTGCCGCCGCCGCTACAAGTTCCTTAAAGACAAGTTTCGCGAGGCGCAC |
| VAX1 | | NM_199131 | 11023 | Homeobox | Seed | ventral anterior homeobox 1 | AAAGTAAATCCAATTCCGCAGCGGACCCGGATTACTGCCGCCGGATCCTG |
| VAX2 | | NM_012476 | 25806 | Homeobox | Seed | ventral anterior homeobox 2 | CATACTGGTGCGAGATGCCAAAGGGACAATTCGGGAAATTGTCCTGCCTA |
| VDR | | NM_000376 | 7421 | NHR | Seed | vitamin D (1,25- dihydroxyvitamin D3) receptor | CAGCATGAAGCTAACGCCCCTTGTGCTCGAAGTGTTTGGCAATGAGATCT |
| VENTX2 | | NM_014468 | 27287 | Homeobox | Seed | VENT-like homeobox 2 | TAAAAACCTGGTTTCAGAATCGCCGCATGAAACACAAACGGCAAATGCAG |
| VIK | NT_007933:1990 | NM_024061 | 79027 | ZnF-C2H2 | Found | vav-1 interacting Kruppel-like protein | CAGCTGCGCTCTTGACAGCCAGGTACCAGGAGTTTGTGACATTCGAGGAT |
| VSX1 | | NM_014588 | 30813 | Homeobox | Seed | visual system homeobox 1 homolog, CHX10-like (zebrafish) | GAAGGTTCTAGCCAGAGTGAGTCAGGATCACAGAGAGGCTCAGATAAAGT |
| WBSCR14 | | NM_032951 | 51085 | bHLH | Seed | Williams-Beuren syndrome chromosome region 14 | GTTTTGACCAGATGCGAGACATGTTTGATGACTACGTCCGAACCCGTACG |
| WHN | | NM_003593 | 8456 | Forkhead | Seed | winged-helix nude | ATCAATCCCTCACTCACTGACTTCGACTTCCAGGGAAACCTGTGGGAACA |
| WHSC1 | | NM_007331 | 7468 | Structural | Seed | Wolf-Hirschhorn syndrome candidate 1 | TAGCAAAAGTTCATCTCCTTCTGCATCCTTAACTGAGAATGAGGTAAAAT |
| WIZ | NT_011290:88 | | 58525 | ZnF-C2H2 | Found | widely-interspaced zinc finger motifs | |
| WT1 | | NM_000378 | 7490 | ZnF-C2H2 | Seed | Wilms tumor 1 | AAAAAGTTTGCCCGGTCAGATGAATTAGTCCGCCATCACAACATGCATCA |
| XBP1 | | NM_005080 | 7494 | bZIP | Seed | X-box binding protein 1 | CTCTGTCAGTGGGGACGTCATCAGCCAAGCTGGAAGCCATTAATGAACTA |
| YAF2 | | NM_005748 | 10138 | Co-repressor | Seed | YY1 associated factor 2 | AGAAAACAAAGTCACCGCCTGCATCTAGTGCTGCCTCTGCAGATCAACAC |
| YBX2 | | NM_015982 | 51087 | Beta-scaffold-cold-shock | Seed | germ cell specific Y-box binding protein | CATGGCCTTTTCCCCAATCAGACAGCTATTAAAAGAAACAACCCCAGGAA |
| YY1 | | NM_003403 | 7528 | ZnF-C2H2 | Seed | YY1 transcription factor | GGCCCTATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCA |
| ZAR1 | | NM_175619 | 326340 | Other | Seed | zygote arrest 1 | AGTAAAACTTCGCCACGTGGACCCTAAACGGCCCCACCGTCAAGATTTGT |
| ZBTB1 | NT_025892:3338 | BC050719 | 22890 | ZnF-BTB/POZ | Found | zinc finger and BTB domain containing 1 | TGAAAATGCATCTTGTGAGCTGTGTGGACTTACAATAACCGAGGAGGACCTGTCA |
| ZBTB2 | NT_023451:235 | NM_020861 | 57621 | ZnF-BTB/POZ | Found | zinc finger and BTB domain containing 2 | GAGGTGAAGAGGCGGAAGTACGAGTGCACAATATGTGGACGCAAATTTATCCAGA |
| ZBTB4 | NT_035416:6 | NM_020899 | 57659 | ZnF-C2H2 | Found | zinc finger and BTB domain containing 4 | ATAGGGGCTGCCAAAGTCACTTTCTACCCTGAGCCCTACCCGCTCGTCTA |
| ZDHHC1 | | U90653 | 29800 | ZnF-Other | Seed | zinc finger, DHHC domain containing 1 | CCACATTTATCTCATGTGGCACAAGCTCACCACCTATGAGTACATCGTGC |
| ZF | | NM_021212 | 58487 | bZIP | Seed | HCF-binding transcription factor Zhangfei | TTTCCTGCATTATTTGAAATTGTGGGCTGGGGAGAAACAGTAGTCAAAGC |
| ZF5128 | | NM_014347 | 25799 | ZnF-C2H2 | Seed | zinc finger protein | CTACAGGAGGCGCAACCCTGGTTCCTGGAGTTTGACAGAGGATAGAGATG |
| ZFD25 | | NM_016220 | 51427 | ZnF-C2H2 | Seed | zinc finger protein (ZFD25) | TCACAGATACTTTTGTACCCATTTTGCACTAGAGGAAAACCATGAAGCAG |
| ZFH4 | NT_008055:104 | NM_024721 | 79776 | ZnF-C2H2 | Found | zinc finger homeodomain 4 | ACCCCAAAAAAGAGGAAAAAATCTCATCTGCTCTTTCAGTGTTGGGCAAAGTTGT |
| ZFHX1B | | NM_014795 | 9839 | ZnF-C2H2 | Seed | zinc finger homeobox 1B | GAAAGTGAAAATAAAAGTATGGATACGGATCCCGAAACGATACGAGATGA |
| ZFHX2 | | AB051549 | 85446 | Homeobox | Seed | zinc finger homeobox 2 | GAGAGAGAGTACGTGCACACGCGCACAAAAGAGAGAAACGGACACCAGAG |
| ZFP | | NM_018651 | 55888 | ZnF-C2H2 | Seed | zinc finger protein | CCCAGGATACTGTGGCATATGAGGACCTATCTGTAGACTACACTCAGAAG |
| ZFP1 | NT_035368:196 | NM_153688 | 162239 | ZnF-C2H2 | Found | zinc finger protein 1 homolog | CCCCAATTGAGGAAAGAGGCGATCTCTTTGGAAAAGCACTTAATCTGAACACAGA |
| ZFP100 | | AL080143 | 25888 | ZnF-C2H2 | Seed | zinc finger protein ZFP100 | CAGAAAGAAGCCGTTGGTGTGTAACGAATGCGGGAAAACGTTCCGTCAGA |
| ZFP103 | | NM_005677 | 7844 | ZnF-Other | Seed | zinc finger protein 103 homolog (mouse) | GGCTTTTTACAGCTACCTTACTTAGATAGCTTTTATGAATATAGCTTAAA |
| ZFP106 | | NM_022473 | 64397 | ZnF-C2H2 | Seed | zinc finger protein 106 | AATTTGTTCGTGTCTATGAATTACAGTCTCATGATCGATTACAAGTTTAT |
| ZFP161 | | NM_003409 | 7541 | ZnF-BTB/POZ | Seed | zinc finger protein 161 homolog (mouse) | AGAAGCATGAGAGAGTTCACAGTAATGAAAGACCGTTTGCGTGCCACATG |
| ZFP26 | | NM_016422 | 50862 | ZnF-Other | Seed | C3HC4-like zinc finger protein | TTGATAAATGGAGTGATCGACACAGGAATTGCCCTATTTGTCGCCTACAG |
| ZFP276 | NT_010542:164 | NM_152287 | 92822 | ZnF-C2H2 | Found | zinc finger protein 276 homolog | AAAATGCCCAGTCTTCGGACGAGTCCTTTGAGCCTTACCCAGAAAGGAAAG |
| ZFP28 | | AB037852 | 140612 | ZnF-C2H2 | Seed | zinc finger protein 28 homolog (mouse) | TTTCATACAGAACACATCCCTTATCCGTCACTGGAGATACTATCATACTG |
| ZFP289 | | NM_032389 | 84364 | ZnF-Other | Seed | zinc finger protein 289, ID1 regulated | TGGCACTGATCTTTGGATAGACAACATGAGTAGTGCCGTTCCTAATCACT |
| ZFP29 | | NM_017894 | 54993 | ZnF-C2H2 | Seed | likely ortholog of mouse zinc finger protein 29 | GCAGATGTTAACCATGCTGCCAAAGGAAATTCAGGCTTGGCTGCAAGAGC |
| ZFP318 | | NM_014345 | 24149 | ZnF-Other | Seed | endocrine regulator | GTATCACCTATAGGGTGTAATTCCTCCGATCCCGCTGACTTCGAACCAAT |
| ZFP36 | | NM_003407 | 7538 | ZnF-C3H | Seed | zinc finger protein 36, C3H type, homolog (mouse) | CAGGCCAATCGCCACCCCAAATACAAGACGGAACTCTGTCACAAGTTCTA |
| ZFP37 | | NM_003408 | 7539 | ZnF-C2H2 | Seed | zinc finger protein 37 homolog (mouse) | AAGCCTTTAATGCAAAATCACAGCTTGTTATACATCAGCGATCCCACACT |
| ZFP42 | NT_022841:73 | NM_174900 | 132625 | ZnF-C2H2 | Found | zinc finger protein 42 | GAAATAGAACCTGTCAGCGCGGTGTGGGCCTTATGTGATGGCTATGTGTG |
| ZFP64 | | NM_018197 | 55734 | ZnF-C2H2 | Seed | zinc finger protein 64 homolog (mouse) | TTTGTTTTTGAACATGGCTATCAAACTTACCTGCCCACGGAAAGTAATGA |
| ZFP67 | | NM_015872 | 51043 | ZnF-BTB/POZ | Seed | zinc finger protein 67 homolog (mouse) | TGTTCGATTCACCAGGAACGACAAGCTGAAGATCCACATGCGGAAGCACA |
| ZFP91 | | AB056107 | 80829 | ZnF-C2H2 | Seed | zinc finger protein 91 homolog (mouse) | GGCACTGAAGGGCTGGTTATGAACTCAGATATACTCGGTGCTACCACAGA |
| ZFP92 | | U82695 | 29977 | ZnF-Other | Seed | zinc finger protein 92 homolog (mouse) | TTGCACATAGGTGACAGAACACAGAGCAAGACGTCGACTTCAACGCAGAA |
| ZFP95 | | NM_014569 | 23660 | ZnF-C2H2 | Seed | zinc finger protein 95 homolog (mouse) | TCAGGGAGAAATCCCAGAGATGCAGTGACAAAAGAAGTAAGAACACAAAA |
| ZFPL1 | | NM_006782 | 7542 | ZnF-PHD | Seed | zinc finger protein-like 1 | AAGTGCATCGTCCAGTCCTACCTGCAATGGCTCCAAGATAGCGACTACAA |
| ZFPM1 | | NM_153813 | 161882 | ZnF-C2H2 | Seed | zinc finger protein, multitype 1 (FOG1) | AGCAGCCTGTCCACCTTCATCGCCCACAAGAAGTATTACTGCTCCTCGCA |
| ZFPM2 | | NM_012082 | 23414 | ZnF-C2H2 | Seed | zinc finger protein, multitype 2 (FOG2) | CGGCACGAAACATACATGGTCCACAAACAGTATTACTGTGCTACACGCCA |
| ZFR | | NM_016107 | 51663 | ZnF-C2H2 | Seed | zinc finger RNA binding protein | CAAAGTTCTAGGCATGGATCCATTACCGCAAATGAGCCAACGTTTTAACA |
| ZFX | | NM_003410 | 7543 | ZnF-C2H2 | Seed | zinc finger protein, X-linked | CACACGAAAGACTACCCCCATAAGTGTGACATGTGTGATAAAGGCTTTCA |
| ZFY | | NM_003411 | 7544 | ZnF-C2H2 | Seed | zinc finger protein, Y-linked | GTGTGGTAAAGGTTTCCGACACCCGTCGGAACTGAGAAAGCACATGCGAA |
| ZHX1 | | NM_007222 | 11244 | Homeobox | Seed | zinc-fingers and homeoboxes 1 | TTGGGAACCTCCACGACATGTGAAACGGAAGCTGTCTAAATCAGATGACT |
| ZHX2 | NT_023663:37 | NM_014943 | 22882 | Homeobox | Found | zinc fingers and homeoboxes 2 | GATTACGTGGAGGTGACGGTCGGGGAGGAGGATGCGATCTCAGATAGATC |
| ZIC1 | | NM_003412 | 7545 | ZnF-C2H2 | Seed | Zic family member 1 (odd-paired homolog, Drosophila) | CACAGCCGGCCACAGTGCGCTCTCTTCCAATTTTAACGAATGGTACGTTT |
| ZIC2 | | NM_007129 | 7546 | ZnF-C2H2 | Seed | Zic family member 2 (odd-paired homolog, Drosophila) | GCGCAACTCCACAACCAGTACGGCCCCATGAATATGAACATGGGTATGAA |
| ZIC3 | | NM_003413 | 7547 | ZnF-C2H2 | Seed | Zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) | TGCCAGTTCAGGCTATGAATCTTCCACTCCACCCGCTATAGCTTCTGCAA |
| ZIC4 | | NM_032153 | 84107 | ZnF-C2H2 | Seed | zinc finger protein of the cerebellum 4 | TTGTCCTTTCCCGGGGTGTGGGAAGGTCTTTGCTAGATCAGAAAATCTCA |
| ZIC5 | | NM_033132 | 85416 | ZnF-C2H2 | Seed | zinc finger protein of the cerebellum 5 | CTGAAGATGAGGAAATTTACGGGAACCCTGAAGTTGTGCGGACGATACAT |
| ZID | | NM_006626 | 10773 | ZnF-BTB/POZ | Seed | zinc finger protein with interaction domain | AAAAATCTCAACCGACACATCCGAGGACACATGGGCATACGGCCCTTTCA |
| ZIM2 | | NM_015363 | 23619 | ZnF-C2H2 | Seed | zinc finger, imprinted 2 | CAAGACATACTTAATTCGTTATCAGCGGAAACATGACTACGTTGGAGAGA |
| ZIM3 | NT_011104:125 | NM_052882 | 114028 | ZnF-C2H2 | Found | zinc finger, imprinted 3 | AGTTATTCAGTTCAAAGTCACGCCTTCAAAGTCACCTGAGGAGGCATGCCTGTCA |
| ZNF10 | | NM_003419 | 7556 | ZnF-C2H2 | Seed | zinc finger protein 10 (KOX 1) | TAAGAAAAGTCATAATGGTAAGAAACTCTGCGAATTGGAAACTATAAATT |
| ZNF100 | NT_035560:167 | NM_173531 | 163227 | ZnF-C2H2 | Found | zinc finger protein 100 | GGGCTGAGAGGAGTCTTCTGGTGCAGTCTTATTTTGAAAAGGGGCCATTG |
| ZNF117 | | NM_024498 | 7670 | ZnF-C2H2 | Seed | zinc finger protein 117 (HPF9) | CCGGAGAGAAACGTTATGAATGTGAAGAATGCGGCAAAGCTTTTAACCGA |
| ZNF11A | | X68686 | 7557 | ZnF-C2H2 | Seed | zinc finger protein 11a (KOX 2) | |
| ZNF11B | | X68684 | 7558 | ZnF-C2H2 | Seed | zinc finger protein 11b (KOX 2) | CTTTCTAAACATGATGGGGTACCTGTGAAACACTATGATTGTGGTGAAAG |
| ZNF123 | | S52506 | 7677 | ZnF-C2H2 | Seed | zinc finger protein 123 (HZF-1) | TCAAAAGGCACCCATTTAAGCATAGGGCTAGCCACTATCAGGCTCACTAC |
| ZNF124 | | NM_003431 | 7678 | ZnF-C2H2 | Seed | zinc finger protein 124 (HZF-16) | AATTCTTCATACGTTCATTCATCCCTTCATAGGCACATCATATCTCATTC |
| ZNF125 | | S52508 | 7679 | ZnF-C2H2 | Seed | zinc finger protein 125 (HZF-3) | TGTGGTCAAGCCTTTAAAAAATGCAGTCTTCTCCAACGTCATAAAAGAAC |
| ZNF126 | | S52507 | 7680 | ZnF-C2H2 | Seed | zinc finger protein 126 (HZF-2) | GCATTTTCACAACACGGTCTTCTCCAACGTCATAAAAGAACACATACTGG |
| ZNF131 | | U09410 | 7690 | ZnF-C2H2 | Seed | zinc finger protein 131 (clone pHZ-10) | AGCCAACAGTGGATTCTGAAGCAGAAAAGGCAGAGAATGAGGACAGAACA |
| ZNF132 | | NM_003433 | 7691 | ZnF-C2H2 | Seed | zinc finger protein 132 (clone pHZ-12) | CCAGAAGTCTGTACCACACAGAAACTCTTCGAGTGCAGCAACTGTGGAAA |
| ZNF133 | | NM_003434 | 7692 | ZnF-C2H2 | Seed | zinc finger protein 133 (clone pHZ-13) | CTTTGGCAATAAGTCAGCTCTAATCACACACAAGCGGGCTCACTCGGAAG |
| ZNF134 | | NM_003435 | 7693 | ZnF-C2H2 | Seed | zinc finger protein 134 (clone pHZ-15) | GTTACAGTATAGAGCAACCCTTAAGAAGGGATAAAAGTGAGGCCTCAATT |
| ZNF135 | | NM_003436 | 7694 | ZnF-C2H2 | Seed | zinc finger protein 135 (clone pHZ-17) | AGCCAGAGCTCCCTTCTCATCGAACACCAGAGGATTCACACCAAGGAAAA |
| ZNF136 | | NM_003437 | 7695 | ZnF-C2H2 | Seed | zinc finger protein 136 (clone pHZ-20) | GAAAGCCTATTCTTGCCGTGCCAGCTTTCAGAGACACATGTTAACACATG |
| ZNF137 | | NM_003438 | 7696 | ZnF-C2H2 | Seed | zinc finger protein 137 (clone pHZ-30) | AGTGTAATGAGTGGGGCAAAGCCTTAAGTGGGAAGTCGTCACTTTTTTAT |
| ZNF138 | | U09847 | 7697 | ZnF-C2H2 | Seed | zinc finger protein 138 (clone pHZ-32) | GAATGTGACAAATCACTTTGCATGCTTTCACGCCTAACTCAACATAAAAA |
| ZNF14 | | NM_021030 | 7561 | ZnF-C2H2 | Seed | zinc finger protein 14 (KOX 6) | AATGTGGAGAAACCACTAGCCAGATGCCAAATGTTAATATCAACAAGGAA |
| ZNF140 | | NM_003440 | 7699 | ZnF-C2H2 | Seed | zinc finger protein 140 (clone pHZ-39) | AGTTTTCACTTGGCATGCATCCCTTATTCAACATACGAAGAGTCACACTG |
| ZNF141 | | NM_003441 | 7700 | ZnF-C2H2 | Seed | zinc finger protein 141 (clone pHZ-44) | |
| ZNF142 | | NM_005081 | 7701 | ZnF-C2H2 | Seed | zinc finger protein 142 (clone pHZ-49) | AGACGTTTGGTACCAACTCGAAACTGCGCTTGCACCGGTTAAGGGTACAT |
| ZNF143 | | NM_003442 | 7702 | ZnF-C2H2 | Seed | zinc finger protein 143 (clone pHZ-1) | CTATGGTTACTGCTGAGGGTACAGAAGGGGAACAGGTTGCAATTGTAGCT |
| ZNF144 | | NM_007144 | 7703 | ZnF-Other | Seed | zinc finger protein 144 (Mel-18) | GTTCTGTACGAGGACGAGCCACTGAAGGAATACTACACCCTCATGGACAT |
| ZNF145 | | NM_006006 | 7704 | ZnF-BTB/POZ | Seed | zinc finger protein 145 (Kruppel-like, expressed in promyelocytic leukemia) | GAAACCCTACGAGTGCAATGGCTGTGACAAGAAGTTCAGCCTCAAGCATC |
| ZNF146 | | NM_007145 | 7705 | ZnF-C2H2 | Seed | zinc finger protein 146 | TTGTACATGTGAGGATTCATTCAGGTGATAAACCTTACGAATGCAATGTT |
| ZNF147 | | NM_005082 | 7706 | Structural | Seed | zinc finger protein 147 (estrogen-responsive finger protein) | TCTTCTTCGCTGTTGCCGACAAGGTCCACCTGATGTATAAGTTCAGGGTG |
| ZNF148 | | NM_021964 | 7707 | ZnF-C2H2 | Seed | zinc finger protein 148 (pHZ-52) | CAACTCCAGATAAGTCCCACTTTGGACTAATAGTTGGTGATTCACAGCAC |
| ZNF151 | | NM_003443 | 7709 | ZnF-BTB/POZ | Seed | zinc finger protein 151 (pHZ-67) | AAGAAGTTCAACCAGGTAGGGAACCTGAAGGCCCACCTGAAGATCCACAT |
| ZNF154 | | U20648 | 7710 | ZnF-C2H2 | Seed | zinc finger protein 154 (pHZ-92) | TGTGGGAAGTTCTTTCCCTACAGCTCCAGTCTCCGAAAACACCAGAGAGT |
| ZNF155 | | NM_003445 | 7711 | ZnF-C2H2 | Seed | zinc finger protein 155 (pHZ-96) | CTTGTACACAGGACATACCGTAAAGACCAGCCGAGAGACTATAGTGGGGA |
| ZNF157 | | NM_003446 | 7712 | ZnF-C2H2 | Seed | zinc finger protein 157 (HZF22) | GAGTGTGGGAAAAACTTCCGTGCAAAGAAATCCCTAAATCAGCATCAAAG |
| ZNF15L1 | | X52339 | 7562 | ZnF-C2H2 | Seed | zinc finger protein 15-like 1 (KOX 8) | ATGTGGCAAAAGCTTTATTCTGTCCTCTCATCTTACTACACATAAGATAA |
| ZNF16 | | NM_006958 | 7564 | ZnF-C2H2 | Seed | zinc finger protein 16 (KOX 9) | TTCAGCCAGCGATCAAAGTTGATCAAACACCAGTTGATTCACACCAGGGA |
| ZNF160 | | X78928 | 7715 | ZnF-C2H2 | Seed | zinc finger protein 160 | ATTCAAACCTAACTACCCATAGAGTGCCATCCCTGAGAGACCAGACCGCT |
| ZNF161 | | NM_007146 | 7716 | ZnF-C2H2 | Seed | zinc finger protein 161 | CCAATGAATCTACCCACACCTATGACATTAGCCGCCCCTCTCAATATAGC |
| ZNF165 | | NM_003447 | 7718 | ZnF-C2H2 | Seed | zinc finger protein 165 | AAAACCTTCCGAGTGAGCTCACATCTTATTCGACACTTTAGAATTCACAC |
| ZNF169 | | U28251 | 7722 | ZnF-C2H2 | Seed | zinc finger protein 169 | GGAATGTGGGCGACACTTCAGGTATACATCCTCTCTCACTAATCACAAGA |
| ZNF17 | | AB075827 | 7565 | ZnF-C2H2 | Seed | zinc finger protein 17 (HPF3, KOX 10) | ACTGGTGATTCAGATCTTCAACAACAGGCTCTTCACAGTGGGTGGAAGCC |
| ZNF174 | | NM_003450 | 7727 | ZnF-C2H2 | Seed | zinc finger protein 174 | TGGCCGTTTGTATGCAGGGGCAAAAGGTGCTCTTGGAGAAAACTGGATCT |
| ZNF175 | | NM_007147 | 7728 | ZnF-C2H2 | Seed | zinc finger protein 175 | CACTTCTAAGTCTCAATTCAAAGAGCATCAGCGAATTCACACGGGTGAGA |
| ZNF177 | | NM_003451 | 7730 | ZnF-C2H2 | Seed | zinc finger protein 177 | AAAAACATCCAATGGCATAAACATGAACTGTGTCAGAACTCACTCTGGAG |
| ZNF179 | | NM_007148 | 7732 | ZnF-Other | Seed | zinc finger protein 179 | TTATGGGATGGTGCCAATCCAGCATCTGGACCTCTTAGTTCGTGACTCAT |
| ZNF18 | | X52342 | 7566 | ZnF-C2H2 | Seed | zinc finger protein 18 (KOX 11) | GGAAAGGCTTTAGTGACTTCTCAGGATTGCGCCACCACGAGAAAATCCAC |
| ZNF180 | | NM_013256 | 7733 | ZnF-C2H2 | Seed | zinc finger protein 180 (HHZ168) | GCTTTCATTAATAGCTATAAACTTATTAGGCATCAGGCAACTCATACTGA |
| ZNF183 | | NM_006978 | 7737 | ZnF-Other | Seed | zinc finger protein 183 (RING finger, C3HC4 type) | GCTTCCGACTTGCCAGAAGACCCCGATGAGGATGCAATTCCCATTACTTA |
| ZNF183L1 | NT_009952:601 | NM_178861 | 140432 | ZnF-C3H | Found | zinc finger protein 183-like 1 | ACCACATCTACCGGGGAATCCACAGCTACCTGAGGTACCTGAAGCCCAAG |
| ZNF184 | | U66561 | 7738 | ZnF-C2H2 | Seed | zinc finger protein 184 (Kruppel-like) | AAACCTTCAGTTATGGTTCATCCCTTATTCAGCATAGGAAGATCCATACT |
| ZNF185 | | NM_007150 | 7739 | Co-activator | Seed | zinc finger protein 185 (LIM domain) | CATGAATATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCT |
| ZNF187 | | Z11773 | 7741 | ZnF-C2H2 | Seed | zinc finger protein 187 | AAACCTTTCAAGTGTAACATATGCCAGAAAGCCTTCCGACTAAACTCACA |
| ZNF189 | | NM_003452 | 7743 | ZnF-C2H2 | Seed | zinc finger protein 189 | GAGAAGTGCGACAAAAGTTTCAGTCAACAGCGCAGTCTTGTCAACCATCA |
| ZNF19 | | NM_006961 | 7567 | ZnF-C2H2 | Seed | zinc finger protein 19 (KOX 12) | AAAGCTTTGGAAGGACTTCCCATCTAAGCCAACATCAGCGTATTCACACA |
| ZNF192 | | NM_006298 | 7745 | ZnF-C2H2 | Seed | zinc finger protein 192 | CGACATCAGAGAATCCACAGTGGTGAAAAATCTGAATCCATAAGCGTTTA |
| ZNF193 | | NM_006299 | 7746 | ZnF-C2H2 | Seed | zinc finger protein 193 | TGGGAAAAGCTTTAATCGACACTGCAACCTCATTCGCCATCAGAAGATCC |
| ZNF195 | | NM_007152 | 7748 | ZnF-C2H2 | Seed | zinc finger protein 195 | ACATCTTTAAGCAGTTATCAGACCTCACTAAGCATAAGAAAACCCATACT |
| ZNF197 | | NM_006991 | 10168 | ZnF-C2H2 | Seed | zinc finger protein 197 | GTCATGTATGTAGGAAAGTCCTTACCTCTAGTAGAAATCTTATGGTACAT |
| ZNF2 | | Z60152 | 7549 | ZnF-C2H2 | Seed | zinc finger protein 2 (A1-5) | GACGCCATTTAGACGGTGAGGGATTCCCGCTCCAGGATTCTATGCTGACT |
| ZNF20 | | AL080125 | 7568 | ZnF-C2H2 | Seed | zinc finger protein 20 (KOX 13) | CAGTTATCTTGACTCCTTTCAATCACATGATAAAGCTTGCACTAAAGAGA |
| ZNF200 | | NM_003454 | 7752 | ZnF-C2H2 | Seed | zinc finger protein 200 | AATGTGGGAGAAGATTTGGTCGGCTGTCAAACTGTACCCGGCATGAGAAA |
| ZNF202 | | NM_003455 | 7753 | ZnF-C2H2 | Seed | zinc finger protein 202 | AAAAGGTTCACAAGATGAACGCGCCTTACAAATATCCCCTAAACCGGAAG |
| ZNF205 | | NM_003456 | 7755 | ZnF-C2H2 | Seed | zinc finger protein 205 | CTGGACCACACGCAGCAGAACTTCTACAGGGATGTCCTGCAGAAGAAAAA |
| ZNF207 | | NM_003457 | 7756 | ZnF-C2H2 | Seed | zinc finger protein 207 | GAGAAGGGCACAGTTACCTAAGTATCAACGTAATCTTCCTCGGCCAGGAC |
| ZNF208 | | NM_007153 | 7757 | ZnF-C2H2 | Seed | zinc finger protein 208 | GAAAATTCATACTGGAGTTCCCAACCCTCCTACACATAAGAAAATTCATG |
| ZNF21 | | X52345 | 7569 | ZnF-C2H2 | Seed | zinc finger protein 21 (KOX 14) | ATGTCCTGTGTGTTGGAAAGCTTTTAGCCAGAAGTCACAGCTCATAATAC |
| ZNF211 | | NM_006385 | 10520 | ZnF-C2H2 | Seed | zinc finger protein 211 | GGGAAATCGTTTAGTCAGATATACAGCCTCAATAGCCATAGGAAAGTTCA |
| ZNF212 | | NM_012256 | 7988 | ZnF-C2H2 | Seed | zinc finger protein 212 | CTGAAAAAGGACACTTCCCGCCCCTACGAATGTTCTGAGTGTGAGATCAC |
| ZNF213 | | AF017433 | 7760 | ZnF-C2H2 | Seed | zinc finger protein 213 | ATGGACCTGTGGCATTGGGAGACATCCCATTCTATTTCTCCCGGGAAGAA |
| ZNF214 | | NM_013249 | 7761 | ZnF-C2H2 | Seed | zinc finger protein 214 | CCTTACAAATGCCGTGAATATTATAAGGGATTTGATCATAATTCACATCT |
| ZNF215 | | NM_013250 | 7762 | ZnF-C2H2 | Seed | zinc finger protein 215 | CAGAATATGAATATGGGAATGACTTGAGTTTGAGTACAGATATTCGACAC |
| ZNF216 | | NM_006007 | 7763 | ZnF-AN1 | Seed | zinc finger protein 216 | |
| ZNF217 | | NM_006526 | 7764 | ZnF-C2H2 | Seed | zinc finger protein 217 | AAACTATGAGAATTTTATTGGGAATGCACATTATCGACCAAATGACAAAA |
| ZNF219 | | NM_016423 | 51222 | ZnF-C2H2 | Seed | zinc finger protein 219 | ACCGGCAAGGATTGTCCTTTCTGCGGAAAATCTTTCCGCTCAGCACATCA |
| ZNF22 | | NM_006963 | 7570 | ZnF-C2H2 | Seed | zinc finger protein 22 (KOX 15) | CTCTTGGAAAGCTGGTACAGAAGGAAGTCTGTGGCTGGTCTCCGTTAAGT |
| ZNF220 | | NM_006766 | 7994 | ZnF-PHD | Seed | zinc finger protein 220 | GACTGTCATGCGTCAGAACATAATAGCCCTATCTCCTCCGTTCAGTCTCA |
| ZNF221 | | NM_013359 | 7638 | ZnF-C2H2 | Seed | zinc finger protein 221 | AGGCAAGACTATCTATAAGTCACGTGCAACAGAAACCTTACCGTTGTAAT |
| ZNF222 | | NM_013360 | 7673 | ZnF-C2H2 | Seed | zinc finger protein 222 | |
| ZNF223 | | NM_013361 | 7766 | ZnF-C2H2 | Seed | zinc finger protein 223 | CAGTGGTCGTGGGACTGTCAGAGCAGAGAATGCTGCAGGGTTTCTAACAG |
| ZNF224 | | NM_013398 | 7767 | ZnF-C2H2 | Seed | zinc finger protein 224 | CCACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAAGAACATTG |
| ZNF225 | | NM_013362 | 7768 | ZnF-C2H2 | Seed | zinc finger protein 225 | TGGGAAGAGCATTGTGCACAGTTCATGCCTTAAAGACCAACAAAGAGACC |
| ZNF226 | | NM_016444 | 7769 | ZnF-C2H2 | Seed | zinc finger protein 226 | GAATCCATGTTGGTGATAAATCCTATAAAAGTAATAGGGGTGGTAAGAAC |
| ZNF228 | | NM_013380 | 7771 | ZnF-C2H2 | Seed | zinc finger protein 228 | ATAGTAGTGATAAATTCTATAAAAGCGAAGACTATGGTAAGGACTACCCT |
| ZNF229 | | AF192979 | 7772 | ZnF-C2H2 | Seed | zinc finger protein 229 | TGCCCTATAGATGTGATGTCTGTGGAAAGGGGTTCAGGTATAAATCGGTT |
| ZNF23 | | AL080123 | 7571 | ZnF-C2H2 | Seed | zinc finger protein 23 (KOX 16) | TGAGTGTGGGAGATGCTTTACTTCTAAAAGAAACCTACTTGATCATCACC |
| ZNF230 | | NM_006300 | 7773 | ZnF-C2H2 | Seed | zinc finger protein 230 | AAGGCTTCACTGATAGCCTAGATTTGCATAAGCATCAGATAATTCACACA |
| ZNF232 | | NM_014519 | 7775 | ZnF-C2H2 | Seed | zinc finger protein 232 | TCTTGTGAGTATGAGACCAGGCTACCTGGGAACCACTCTACCAGTCAAGA |
| ZNF233 | NT_011109:135 | NM_181756 | 353355 | ZnF-C2H2 | Found | zinc finger protein 233 | GTATATGCCCGGAGCTCCAACCAGAACTCCTGTCTTCCCTCTCATGAGCTTAC |
| ZNF234 | | X78927 | 10780 | ZnF-C2H2 | Seed | zinc finger protein 234 | AGACTCTATGATAAGTATTTCTCGGTTCCCCAGACAAGGTGATTTGTCCT |
| ZNF235 | | NM_004234 | 9310 | ZnF-C2H2 | Seed | zinc finger protein 235 | AAGTGTGATGCATGTCAGAAGCGATTCAGTCAGGCCTCACACCTTCAAGC |
| ZNF236 | | NM_007345 | 7776 | ZnF-C2H2 | Seed | zinc finger protein 236 | GGTCTTATAACCGGAATATCGACAGAAGTGGATTCACGTATTCGTGTCCG |
| ZNF237 | | NM_014242 | 9205 | ZnF-Other | Seed | zinc finger protein 237 | TGAAATACATTATTACTAATGTTACAACCTTAGAAACAGGTATAAGCTCT |
| ZNF238 | | NM_006352 | 10472 | ZnF-C2H2 | Seed | zinc finger protein 238 | GTCGGTCAAAAGCGAAGCACTGAGCTTGCCTACTGTCAGAGACTGGACCT |
| ZNF239 | | NM_005674 | 8187 | ZnF-C2H2 | Seed | zinc finger protein 239 | TCACAGGTGGTCAGTTGTAGTCAGCAGAGAGGTCATACAGAGGAGAAACC |
| ZNF24 | | NM_006965 | 7572 | ZnF-C2H2 | Seed | zinc finger protein 24 (KOX 17) | ACATCAGAGAAGACACAATGCAGAAAAACTTCTGAATGTTGTGGAAGTTT |
| ZNF25 | | X52350 | 7573 | ZnF-C2H2 | Seed | zinc finger protein 25 (KOX 19) | TGGGAAGTTCTTCTATGTGAAGGCATACCTCATGGTACATCAGAAAACAC |
| ZNF253 | NT_011295:613 | NM_021047 | 56242 | ZnF-C2H2 | Found | zinc finger protein 253 | |
| ZNF254 | | NM_004876 | 9534 | ZnF-C2H2 | Seed | zinc finger protein 254 | CATGCTTTCACATAAAACCCAACACAAAAGCATTTATCATAGAGAGAAGT |
| ZNF255 | | NM_005774 | 10173 | ZnF-C2H2 | Seed | zinc finger protein 255 | CAGAGACGCCACAGCAGAGAAACACCTCTCAAATGTGAGCAGCATGGGAA |
| ZNF256 | | NM_005773 | 10172 | ZnF-C2H2 | Seed | zinc finger protein 256 | AATCCTTTAGTAACCACTCTAGCCTCGTTAAACACCGAAGAGTTCATACC |
| ZNF257 | NT_033317:9 | NM_033468 | 113835 | ZnF-C2H2 | Found | zinc finger protein 257 | |
| ZNF258 | | NM_007167 | 9204 | ZnF-Other | Seed | zinc finger protein 258 | TGATGGTTGTAAACGACAGGGTAAACTAAGCGAGTCCATAAAGTGGCGAG |
| ZNF259 | | NM_003904 | 8882 | ZnF-Other | Seed | zinc finger protein 259 | TGGAGCGTTACAAGCGCACCTTTGACCAAAATGAGGAGCTAGGGCTCAAT |
| ZNF26 | | NM_019591 | 7574 | ZnF-C2H2 | Seed | zinc finger protein 26 (KOX 20) | TCCTTCTGTTGGAATTCAGGGCTTCGTATACATCGGAAGACTCATAAATG |
| ZNF261 | | NM_005096 | 9203 | ZnF-Other | Seed | zinc finger protein 261 | AAAATGGGAATTTGGGCAAGATCCCTGTGAAGACCCGATCAGCTCCCACT |
| ZNF262 | | NM_005095 | 9202 | ZnF-Other | Seed | zinc finger protein 262 | CAGTTCCAACAGTAACAGCGAAAATCATCGGTGATGCAAGTACTCAAACA |
| ZNF263 | | NM_005741 | 10127 | ZnF-C2H2 | Seed | zinc finger protein 263 | GTGGAGAAAGCTTCTCTCGGAGTTCCCGTCTTATGAGTCATCAGAGAACT |
| ZNF264 | | NM_003417 | 9422 | ZnF-C2H2 | Seed | zinc finger protein 264 | GGAAGACCTTTTACAAGTGGACAAACCTCAGTTACCCTTCGAGAACTTCT |
| ZNF265 | | NM_005455 | 9406 | ZnF-Other | Seed | zinc finger protein 265 | GAAGATCAGAGTGTAATATGTGTAATACTCCAAAGTATGCTAAATTAGAA |
| ZNF266 | | X78924 | 10781 | ZnF-C2H2 | Seed | zinc finger protein 266 | AAGCCTTTAAGTTTCCCACGTGTGTTAACCTTCACATGCGGATCCACACT |
| ZNF267 | | NM_003414 | 10308 | ZnF-C2H2 | Seed | zinc finger protein 267 | CTTCAGCTATAGGTCATACCTCACTACACATCGGAGAAGTCATAGTGGAG |
| ZNF268 | | AF317549 | 10795 | ZnF-C2H2 | Seed | zinc finger protein 268 | TTCATTTGGAAATCACTACTCATTGTACATGAGCGAACTCATGCAGGGGT |
| ZNF271 | | NM_006629 | 10778 | ZnF-C2H2 | Seed | zinc finger protein 271 | AAAACCCTATCAATGCCGTCATTGTAGTAAAAGTTTTAGCCAGCGCTCAG |
| ZNF272 | | X78931 | 10794 | ZnF-C2H2 | Seed | zinc finger protein 272 | AACCCATCCAGAGTGGGAACGTTTCTTGTGAGAGCACAGATCTCATTCAA |
| ZNF273 | | X78932 | 10793 | ZnF-C2H2 | Seed | zinc finger protein 273 | |
| ZNF274 | | NM_016324 | 10782 | ZnF-C2H2 | Seed | zinc finger protein 274 | GAGCTCACACCTTATTTGGCACCAGAGAACCCACAATAGGACAAAGCGAA |
| ZNF275 | | NM_020636 | 10838 | ZnF-C2H2 | Seed | zinc finger protein 275 | TCTTCCGACATCAGAAACTTCACACTTCGGAAAAGCCTTTCGCCTGCAAG |
| ZNF277 | | NM_021994 | 11179 | ZnF-C2H2 | Seed | zinc finger protein (C2H2 type) 277 | AAACTAAACACACTTCGCTGCTCCCCGATAGAAAGACGTGGGATCAACTG |
| ZNF278 | | NM_014323 | 23598 | ZnF-BTB/POZ | Seed | zinc finger protein 278 | TTGGGTTTCAGATTGTTCAGTCGGCATTTGCGTCATCTTTAGTAGATCCT |
| ZNF28 | | X52355 | 7576 | ZnF-C2H2 | Seed | zinc finger protein 28 (KOX 24) | CAGAAGCGATACCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACC |
| ZNF281 | | NM_012482 | 23528 | ZnF-C2H2 | Seed | zinc finger protein 281 | CTACACATCAGCAGTTGACACCTTCCCAGGAGCTGGATGATCTGATAGAT |
| ZNF282 | | D30612 | 8427 | ZnF-C2H2 | Seed | zinc finger protein 282 | GATTTGGCAGACAGAGATATTCCCACGGATCCCAATTCAGAGTCTCTCAT |
| ZNF286 | | NM_020652 | 57335 | ZnF-C2H2 | Seed | zinc finger protein 286 | GAAAGGTTTTAATCGAAGTACACATCTTGTGCAGCATCAGTTGATTCATA |
| ZNF287 | | NM_020653 | 57336 | ZnF-C2H2 | Seed | zinc finger protein 287 | AACCTTATTCAGCATCAACGTGTTCATACAGGTGCCAAACATCGTAATTA |
| ZNF288 | | NM_015642 | 26137 | ZnF-BTB/POZ | Seed | zinc finger protein 288 | TCCGTCTGCCCAGCAAAGTTTGACCAAATCGAGCAGTTCAACGACCACAT |
| ZNF29 | | X52357 | 7577 | ZnF-C2H2 | Seed | zinc finger protein 29 (KOX 26) | TTCAGTCAGAGCTCAACTCTTACAAAACATATAAAGGTCTACACTGGAGA |
| ZNF294 | | AB018257 | 26046 | ZnF-Other | Seed | zinc finger protein 294 | ATGACGGTTAAAGCTCGAGCTACTACTCGAGAGGTAATGGCTACTTATAC |
| ZNF295 | | NM_020727 | 49854 | ZnF-BTB/POZ | Seed | zinc finger protein 295 | GACATTCAAGACTGCATTTAGTCTTTGGAGTCACGAACAAACACACAATT |
| ZNF297 | | NM_005453 | 9278 | ZnF-BTB/POZ | Seed | zinc finger protein 297 | CTCAATCTGCGGCCGTTTGACTGCCCCGTGTGCAACAAAAAGTTCAAGAT |
| ZNF297B | | NM_014007 | 23099 | ZnF-BTB/POZ | Seed | zinc finger protein 297B | TAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACAACTGAGGCTAACT |
| ZNF3 | | NM_017715 | 7551 | ZnF-C2H2 | Seed | zinc finger protein 3 (A8-51) | CTGGAGAATTACGGGAATGTGTTCTCACTGGATCGTGAGACCAGGACTGA |
| ZNF30 | | X52359 | 7578 | ZnF-C2H2 | Seed | zinc finger protein 30 (KOX 28) | AAGACTTTTAGTCGAGCCTCGTACCTTGTACAACATAGCAGAATCCATAC |
| ZNF300 | NT_006859:367 | NM_052860 | 91975 | ZnF-C2H2 | Found | zinc finger protein 300 | CTTCAGGCAGGTCACATTTGTTAACAGCAAAACAGTGACTGAGGCATCAGGGC |
| ZNF302 | NT_011196:498 | NM_018443 | 55900 | ZnF-C2H2 | Found | zinc finger protein 302 | |
| ZNF304 | | NM_020657 | 57343 | ZnF-C2H2 | Seed | zinc finger protein 304 | AGAAAGAGCTCACGAGTGCAACAGTTTTGGTGGCCCTTTAGCTGCATCTC |
| ZNF305 | | NM_014724 | 9753 | ZnF-C2H2 | Seed | zinc finger protein 305 | CTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGA |
| ZNF306 | | NM_024493 | 80317 | ZnF-C2H2 | Seed | zinc finger protein 306 | ATAAAAATGTTCAGGAACCTGAGACAGGGAGAGGCTGGAAAGTAGGATGG |
| ZNF31 | | NM_145238 | 7579 | ZnF-C2H2 | Seed | zinc finger protein 31 (KOX 29) | CTGAAGAGGACTTAGAAAAACTTATTGACCATCAAGGCCTGTACCTTGCA |
| ZNF313 | | NM_018683 | 55905 | ZnF-Other | Seed | zinc finger protein 313 | TTCCATAGCACGGATACCAAATCTGTGGTTTGTCCGATATGTGCCTCGAT |
| ZNF317 | NT_011176:75 | NM_020933 | 57693 | ZnF-C2H2 | Found | zinc finger protein 317 | |
| ZNF319 | | AB037809 | 57567 | ZnF-C2H2 | Seed | zinc finger protein 319 | ACAGTGGCCTGGTGAAGTGTTCCATCTGTGAAAAGACCTACAAGCCAGCT |
| ZNF32 | | NM_006973 | 7580 | ZnF-C2H2 | Seed | zinc finger protein 32 (KOX 30) | CAGGGCCAAAGGCAATCTTGTTACACATCAACGGATACACACGGGAGAGA |
| ZNF322A | NT_007592:1565 | NM_024639 | 79692 | ZnF-PHD | Found | zinc finger protein 322A | |
| ZNF323 | NT_007592:1771 | NM_030899 | 64288 | ZnF-C2H2 | Found | zinc finger protein 323 | GGACATTCTGAAGTGCTCTTGGAGGATGTGGAACATCTGAAGGTCAAGCAGGAA |
| ZNF325 | | NM_016265 | 51711 | ZnF-C2H2 | Seed | zinc finger protein 325 | GATCAAGCTTATGAATTTAATCAAAATGGGGAACCTTATACTCTAAATGA |
| ZNF333 | NT_025155:3 | NM_032433 | 84449 | ZnF-C2H2 | Found | zinc finger protein 333 | ATGCCAGGAATGCGGGCGAGCCTTTGGTCAGTCTTCACATCTTATTGTACAT |
| ZNF334 | | NM_018102 | 55713 | ZnF-C2H2 | Seed | zinc finger protein 334 | ATGAAAATGAAAAAATTTCAGATACCAGTTTCATTCCAGGACCTGACTGT |
| ZNF335 | NT_011362:859 | NM_022095 | 63925 | ZnF-C2H2 | Found | zinc finger protein 335 | CCAGACCGTACAGCACCTGGTGACCTCCGACAACCAGGTGCAGTATATCAT |
| ZNF336 | NT_011387:1856 | NM_022482 | 64412 | ZnF-C2H2 | Found | zinc finger protein 336 | ACTCTTCGGCGGCACACCTCAATACACGATAAGAATACTCCATGGAAGTC |
| ZNF337 | | AL049942 | 26152 | ZnF-C2H2 | Seed | zinc finger protein 337 | GAGTGTGGACGAAAGTTTAGCAATAAGTCATACTACAGTAAGCACTTAAA |
| ZNF339 | NT_011387:1400 | NM_021220 | 58495 | ZnF-C2H2 | Found | zinc finger protein 339 | GCTACACGGGCCCCACCCAGGAGGACCTGTACCTGCACGTGAACAGTGCCCAT |
| ZNF33A | | X68687 | 7581 | ZnF-C2H2 | Seed | zinc finger protein 33a (KOX 31) | TCATCCCTCTTGTTCCATCAGATATCTCCGTCAAGGGACAATCACTATGA |
| ZNF341 | NT_028392:330 | NM_032819 | 84905 | ZnF-C2H2 | Found | zinc finger protein 341 | TGCGAGTCTGCGTTCAACCGCAAGGACAAACTGAAGAGACACATGTTGATC |
| ZNF342 | NT_011109:256 | NM_145288 | 162979 | ZnF-C2H2 | Found | zinc finger protein 342 | GAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCATCACCCAAAAAGAT |
| ZNF347 | NT_011109:1491 | NM_032584 | 84671 | ZnF-C2H2 | Found | zinc finger protein 347 | CAAATAGCAGGAAACCCAGATGGATGGGAATGGATCAAAGCTGTGATCACAGC |
| ZNF35 | | NM_003420 | 7584 | ZnF-C2H2 | Seed | zinc finger protein 35 (clone HF.10) | GGGAAAGGATTTAGTCAGAGTGCAAACCTCGTTGTGCATCAGCGAATCCA |
| ZNF350 | NT_011109:1276 | NM_021632 | 59348 | ZnF-C2H2 | Found | zinc finger protein 350 | AGAAGCAGCCAAGGTGGAAAATCCTCCTGCAGAGAGGCACAGCTCATTACAC |
| ZNF354A | | NM_005649 | 6940 | ZnF-C2H2 | Seed | zinc finger protein 354A | CGGGTAGGAAGGCATCTAGTTGCAGCACATCCCTTTCTGGATGTCAAAGA |
| ZNF358 | | NM_018083 | 140467 | ZnF-C2H2 | Seed | zinc finger protein 358 | TCCAGATGTGATTGGCCCCGTACCCCTGATTCTCGATCCTAACAGCGACA |
| ZNF36 | | U09848 | 7586 | ZnF-C2H2 | Seed | zinc finger protein 36 (KOX 18) | CTTTCAACCGAAACTCATACCTGATTTTGCATCGGAGAATTCACACTCGA |
| ZNF361 | | NM_018555 | 55422 | ZnF-C2H2 | Seed | zinc finger protein 361 | GGCGAAATCCTACGAATGTAAGGAGTGCGGGAAGGCATGTAACCACCTAA |
| ZNF364 | | AL079314 | 27246 | ZnF-Other | Seed | zinc finger protein 364 | TGCAAGCAACAGATTTAGCAATGACAGTCAGCTAAATGACCGATGGACTT |
| ZNF366 | NT_006713:99 | NM_152625 | 167465 | ZnF-C2H2 | Found | zinc finger protein 366 | CAGGGCTTTTCAGAGTACCCGGCGGGGCCCCTCTTTTTCTGATTACTTATAC |
| ZNF37A | | X69115 | 7587 | ZnF-C2H2 | Seed | zinc finger protein 37a (KOX 21) | ATGTTACAAAACTAAAAGTGGAAAAAACTTATTGGTGAATGAATATAGGA |
| ZNF37A | NT_033896:447 | AJ492195 | 7587 | ZnF-C2H2 | Found | zinc finger protein 37a (KOX21) | AAATTTTTCTGCTACTACTCCGGTTTCACAGAACATCTGAGAAGACACAC |
| ZNF38 | | NM_032924 | 7589 | ZnF-C2H2 | Seed | zinc finger protein 38 | TCAGAAGCACTTAGCGTTGGCCTCTGATTGCTGTCCTCTCTTGTCCTCTT |
| ZNF382 | NT_011192:90 | NM_032825 | 84911 | ZnF-C2H2 | Found | zinc finger protein ZNF382 | TGGAAAAGAAGCCCTCTGCCTACAACAAATATGGGAAATTCCTCTGCAGAAAGCC |
| ZNF384 | NT_009731:144 | NM_133476 | 171017 | ZnF-C2H2 | Found | zinc finger protein 384 | GAAAGACGGCAAGACCTACAGGTGCCGGATGTGCTCACTGACATTCTACTCC |
| ZNF394 | NT_007933:1972 | NM_032164 | 84124 | ZnF-C2H2 | Found | zinc finger protein 394 | ATGTGGGGAGCGCTTCAGGCAGAATTCACACCTAAATCGTCATCAAAGTACCC |
| ZNF396 | NT_010934:143 | NM_145756 | 252884 | ZnF-C2H2 | Found | zinc finger protein 396 | CCGAAGCGCAATTCTGATTCAGCATCGACGAACCCATACTGATTCAAAATA |
| ZNF397 | NT_010934:119 | NM_032347 | 84307 | ZnF-C2H2 | Found | zinc finger protein 397 | TTCGAGGAATTAAGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGA |
| ZNF398 | NT_007914:756 | NM_020781 | 57541 | ZnF-C2H2 | Found | zinc finger protein 398 | CACCAGGTCCCCTCATAACTGGGCTTGAAACTTCTGGCCTGGGTGTCAAC |
| ZNF406 | NT_007994:1 | AB040918 | 57623 | ZnF-C2H2 | Found | zinc finger protein 406 | GGTGGTTTGAAGTGTCCTGTTTGCAGCTTTGTATATGGCACCAAATGGGAGTTCA |
| ZNF407 | NT_025004:1 | NM_017757 | 55628 | ZnF-C2H2 | Found | zinc finger protein 407 | ATCGAAAACCCGGACCTCGCTTACCTGCATGCTGGTAAGGGACAGAAACT |
| ZNF408 | | NM_024741 | 79797 | ZnF-C2H2 | Seed | zinc finger protein 408 | GCCAGGGATGTTGTTGAGGTCACCATTTCAGAAAGCCAGGAGAAGTGCTT |
| ZNF409 | NT_025892:468 | AB028979 | 22830 | ZnF-C2H2 | Found | zinc finger protein 409 | GTCTCCCCACTACACCTGCGCTGCAACATCTGTGACTTTGAGTCCAACAG |
| ZNF41 | | M92443 | 7592 | ZnF-C2H2 | Seed | zinc finger protein 41 | GCCTTCATATGGAAGTCGCGCCTCAAAATACATCAGAAATCTCATATTGG |
| ZNF42 | | NM_003422 | 7593 | ZnF-C2H2 | Seed | zinc finger protein 42 (myeloid-specific retinoic acid-responsive) | AAGGTGTTCAGCCAACGCAGCAACCTGCTGAGGCACCAGAAGATCCACAC |
| ZNF426 | NT_011176:123 | NM_024106 | 79088 | ZnF-C2H2 | Found | zinc finger protein 426 | CCCAGTGGTCTATACTTCAGCAGGACTTTTTGAGGGGTCAGACATCCATTGGGA |
| ZNF43 | | NM_003423 | 7594 | ZnF-C2H2 | Seed | zinc finger protein 43 (HTF6) | TTGGGAGCCTATGAGGAGACATGAAATGGTAGCCAAACCCCCAGTTATGT |
| ZNF431 | NT_035560:82 | NM_133473 | 170959 | ZnF-C2H2 | Found | zinc finger protein 431 | |
| ZNF433 | NT_011176:487 | NM_152602 | 163059 | ZnF-C2H2 | Found | zinc finger protein 433 | CCTTTCAACTGTCTCTCCTCTGTTCAGACACATGAAAGGGCTCATAGTGGAAGGA |
| ZNF434 | NT_010552:596 | NM_017810 | 54925 | ZnF-C2H2 | Found | zinc finger protein 434 | AGTCACCAGAGTTTTTGTGCCAGGGACAAAGCCTGTACACATATCCTCTGTGGGA |
| ZNF435 | NT_007592:1726 | NM_025231 | 80345 | ZnF-C2H2 | Found | zinc finger protein 435 | CAATTCAGAAAGACGGGACATACTCATGGACAAGTTGGCCCCCTTGGGAAG |
| ZNF436 | NT_032979:37 | NM_030634 | 80818 | ZnF-C2H2 | Found | zinc finger protein 436 | CTCTCCAACCAGTCACTGATCTACTTGTCCACAAAGAAGTCCACACAGGCATCCG |
| ZNF44 | | X16281 | 7595 | ZnF-C2H2 | Seed | zinc finger protein 44 (KOX 7) | GGACTCACAGTGAAGAAAAATCTTATGAGTGTCAAATTTGTGCAAAGCCT |
| ZNF440 | NT_011176:446 | NM_152357 | 126070 | ZnF-AN1 | Found | zinc finger protein 440 | |
| ZNF443 | | NM_005815 | 10224 | ZnF-C2H2 | Seed | zinc finger protein 443 | |
| ZNF445 | NT_034534:46 | NM_181489 | 353274 | ZnF-C2H2 | Found | zinc finger protein 445 | GAAAGACCTTCAGGTGGTCTTCGAACCTGGCTCGGCATATGAAAAACCAT |
| ZNF45 | | NM_003425 | 7596 | ZnF-C2H2 | Seed | zinc finger protein 45 (a Kruppel-associated box (KRAB) domain polypeptide) | CAACCCAGAGAGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGATGGAG |
| ZNF454 | NT_006802:20 | NM_182594 | 285676 | ZnF-C2H2 | Found | zinc finger protein 454 | ATGAATCCGGGAGCACTATGAGCTCATCTCTTCACAGTGATCAAAGTCAGGGATT |
| ZNF46 | | NM_006977 | 7597 | ZnF-BTB/POZ | Seed | zinc finger protein 46 (KUP) | GGAACACATGTATACACACAAAGGTAAATCTTACAGATATAACCGATGCC |
| ZNF481 | NT_017568:1387 | NM_020924 | 57684 | ZnF-BTB/POZ | Found | zinc finger protein 481 | GTGTCTACTCTGCGGCAAGACTTTCACTCAGAAAGGCAACCTTCATCGACACATG |
| ZNF486 | NT_035560:14 | BC008936 | 90649 | ZnF-C2H2 | Found | zinc finger protein 486 | |
| ZNF490 | NT_011176:576 | NM_020714 | 57474 | ZnF-C2H2 | Found | zinc finger protein 490 | TCTCACTCAAGCCTTCGAAAACACGTGAAAACCCACACCGGAGTTCAACCTTA |
| ZNF491 | NT_011176:438 | NM_152356 | 126069 | ZnF-C2H2 | Found | zinc finger protein 491 | TGGGATATTCATCCTTTAATAGGAACATCAGAACTGACACTGGACACCAACCACA |
| ZNF493 | NT_035560:126b | NM_175910 | 284443 | ZnF-C2H2 | Found | zinc finger protein 493 | GGTCCTCACACCTCGCTGGGCACAAGCAAATTCATAGTGTACAAAAACCCTAC |
| ZNF494 | NT_011104:214 | NM_152677 | 201516 | ZnF-C2H2 | Found | zinc finger protein 494 | AGGTGTCCCTATGGTGATGGGAGCAGGGTGTATCTCTCAACCAGAGCAGT |
| ZNF495 | NT_011104:32a | NM_024303 | 79149 | ZnF-C2H2 | Found | zinc finger protein 495 | |
| ZNF496 | NT_031730:64 | NM_032752 | 84838 | ZnF-C2H2 | Found | zinc finger protein 496 | TACGTGTGTCCGAACTGTGGGAAAATCTTCCGCTGGAGGGTCAACTTCAT |
| ZNF497 | NT_011104:359 | NM_198458 | 162968 | ZnF-C2H2 | Found | zinc finger protein 497 | ACTGCAGCAAGGCCTTCGTGCGCAAGTCGGAGCTCTTAAGCCACCGGCGC |
| ZNF498 | NT_007933:1998 | NM_145115 | 221785 | ZnF-C2H2 | Found | zinc finger protein 498 | AATCTCGTCAGGCACCAGCGAACCCACGAAGAGAAGTCTTATGGCTGTGT |
| ZNF502 | NT_034534:1 | NM_033210 | 91392 | ZnF-C2H2 | Found | zinc finger protein 502 | GCATGTGAGGGCATGAAGGAAAACTCTCCTAGGGAGATTGCTGAATCATGCCTTT |
| ZNF503 | NT_033890:224 | NM_032772 | 84858 | ZnF-C2H2 | Found | zinc finger protein 503 | GCGCTGCGCAGCCCCCACCACGCGCTGGGACTCAGCAGCCGCTACCACCC |
| ZNF509 | NT_006051:22 | NM_145291 | 166793 | ZnF-BTB/POZ | Found | zinc finger protein 509 | GGCAGAATTTGATAGCCACTCTGGCGGCTCCTATTGTAAGTTACGGTCCATGAT |
| ZNF513 | NT_005204:559 | NM_144631 | 130557 | ZnF-C2H2 | Found | zinc finger protein 513 | AACAGTGACCAGCTCATGGGCTTCGAGAGAGACTCGGAAGGAGACTCTCT |
| ZNF514 | NT_022300:33 | NM_032788 | 84874 | ZnF-C2H2 | Found | zinc finger protein 514 | CAGTTCTCGAAGTTGAAAGCAGCCTGCGGTTGTGATGGCCAGTTAGAGATG |
| ZNF519 | NT_010859:601 | NM_145287 | 162655 | ZnF-C2H2 | Found | zinc finger protein 519 | TCAGAAGAAGCCTCAGTTTCTGTCAGCTGCTCCTACAGAACCATGTATTCCTATG |
| ZNF528 | NT_011109:1343 | NM_032423 | 84436 | ZnF-C2H2 | Found | zinc finger protein 528 | |
| ZNF6 | | NM_021998 | 7552 | ZnF-C2H2 | Seed | zinc finger protein 6 (CMPX1) | GTTAATAAAACAGTTGTCCCTGTTGTCTGGGCTGCGGCATATGGAAATAC |
| ZNF7 | | NM_003416 | 7553 | ZnF-C2H2 | Seed | zinc finger protein 7 (KOX 4, clone HF.16) | GGACAGAGGCACCAAGGACCTCCAAGACAGATTCTACGATTAGGACTGAA |
| ZNF71 | NT_011104:94 | NM_021216 | 58491 | ZnF-C2H2 | Found | zinc finger protein 71 (Cos26) | AAACTCTTAGGGGGCTCAGTACCCGCATGTCATGAACTGAAGGCATTTGCC |
| ZNF73 | | NM_012480 | 7624 | ZnF-C2H2 | Seed | zinc finger protein 73 (Cos12) | GCCTGTAATAACTTAGCTATTATTGTCCAAGGGATAACTCAGGTAAGACA |
| ZNF74 | | NM_003426 | 7625 | ZnF-C2H2 | Seed | zinc finger protein 74 (Cos52) | AAGCCCTTGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGT |
| ZNF75 | NT_011786:383 | NM_007131 | 7626 | ZnF-C2H2 | Found | zinc finger protein 75 (D8C6) | TTCTGGAGCTTCCGTTATCATGAAGCAACCGGACCGCTTGAGACTATCAGC |
| ZNF75A | | NM_153028 | 7627 | ZnF-C2H2 | Seed | zinc finger protein 75a | GGGAAAAGCTTCAGTCAAAATACAAATTTACATACACACCAAAGAACTCA |
| ZNF76 | | NM_003427 | 7629 | ZnF-C2H2 | Seed | zinc finger protein 76 (expressed in testis) | ACTATAAGAATCACGTGCGCATCCACACAGGGGAGAAGCCATACGTTTGC |
| ZNF77 | NT_011255:4 | NM_021217 | 7630 | ZnF-C2H2 | Found | zinc finger protein 77 (pT1) | ATAACACTGGAGATCAGCACCAAATCCCACAGAGGCATCTGAGAAGTCAGCTGG |
| ZNF79 | | NM_007135 | 7633 | ZnF-C2H2 | Seed | zinc finger protein 79 (pT7) | CTCATTCGGCATCATATAATCCACACCGGAGAAAAACCTTATGAGTGTAA |
| ZNF8 | | M29581 | 7554 | ZnF-C2H2 | Seed | zinc-finger protein 8 (clone HF.18) | AGAGCCTTCTGTGGGTGCTTCCATGTTATTTGACATCAGAGAATCCACAT |
| ZNF80 | | NM_007136 | 7634 | ZnF-C2H2 | Seed | zinc finger protein 80 (pT17) | GGACTTTGGCTACCACTCTGCTTTTGCCCAACAGAGTAAGATCCACTCTG |
| ZNF81 | | X68011 | 7635 | ZnF-C2H2 | Seed | zinc finger protein 81 (HFZ20) | AAAGGGGTTCACCCAGAAATCAGTTCTCAGTATGCATCGCAATATTCATA |
| ZNF83 | | NM_018300 | 55769 | ZnF-C2H2 | Seed | zinc finger protein 83 (HPF1) | TTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCGGAAA |
| ZNF84 | | NM_003428 | 7637 | ZnF-C2H2 | Seed | zinc finger protein 84 (HPF2) | GAGAGCTATAAAAAGTCACAGATTATCATATATCATAGAAATCGTTTAGG |
| ZNF85 | | NM_003429 | 7639 | ZnF-C2H2 | Seed | zinc finger protein 85 (HPF4, HTF1) | TGGCAAATCATTTGGCATGATTTCATGCCTAACTGAACATAGCAGAATTC |
| ZNF9 | | NM_003418 | 7555 | ZnF-Other | Seed | zinc finger protein 9 (a cellular retroviral nucleic acid binding protein) | GAGGTGGTTTTACCTCGGATAGAGGTTTCCAGTTTGTTTCCTCGTCTCTT |
| ZNF90 | | M61870 | 7643 | ZnF-C2H2 | Seed | zinc finger protein 90 (HTF9) | AAGTGATAGTGACAAGATATGAAAAACGTGAATATGGCAATTTAGAGTTA |
| ZNF91 | | NM_003430 | 7644 | ZnF-C2H2 | Seed | zinc finger protein 91 (HPF7, HTF10) | ATTTTGCATCCGTTTACACAAAACCCAACATAAATGCGTTTATATTACAG |
| ZNF92 | | M61872 | 7645 | ZnF-C2H2 | Seed | zinc finger protein 92 (HTF12) | TGAAAATAGAATTCTCTCTAGAGGAATGGCAATGCTTGGACACTGCGCCA |
| ZNF93 | | M61873 | 7646 | ZnF-C2H2 | Seed | zinc finger protein 93 (HTF34) | |
| ZNF-kaiso | | NM_006777 | 10009 | ZnF-BTB/POZ | Seed | Kaiso | TGTAACAGATGGCAGTACTGAGTTTGAATTTATAATACCAGAGTCTTACT |
| ZNFN1A1 | | NM_006060 | 10320 | ZnF-C2H2 | Seed | zinc finger protein, subfamily 1A, 1 (Ikaros) | CTGGACAGACTAGCAAGTAACGTCGCCAAACGTAAGAGCTCTATGCCTCA |
| ZNFN1A2 | | NM_016260 | 22807 | ZnF-C2H2 | Seed | zinc finger protein, subfamily 1A, 2 (Helios) | AGCTTATTCTCAGGTCTATCATCCAAATAGGATAGAAAGACCCATTAGCA |
| ZNFN1A3 | | NM_012481 | 22806 | ZnF-C2H2 | Seed | zinc finger protein, subfamily 1A, 3 (Aiolos) | TGACCCTTTCGAGTGTAACATGTGTGGAGATCGAAGCCATGATCGGTATG |
| ZNFN1A4 | NT_009458:35 | NM_022465 | 64375 | ZnF-MYND | Found | zinc finger protein, subfamily 1A, 4 (Eos) | CTCTGAGCGGCCAACTTTCATCGATCGTCTGGCCAATAGCCTCACCAAAC |
| ZNF-U69274 | | NM_014415 | 27107 | ZnF-BTB/POZ | Seed | zinc finger protein | CTGTATGTAGCGAAGCCTACATAGATGCTCGAACACTCCGTAAACATATG |
| ZNRF1 | NT_035368:168 | NM_032268 | 84937 | ZnF-Other | Found | zinc and ring finger protein 1 | CAAAAGCTGCATAGACTCGTGGTTTGAAGTGAACAGATCTTGTCCGGAACACC |
| ZXDA | | L14787 | 7789 | ZnF-C2H2 | Seed | zinc finger, X-linked, duplicated A | AAACAGTGTCTCAGAACTACTGACACCAGCCAAAGCGGAGTGGAGCGTAC |
| ZXDB | | L14788 | 7790 | ZnF-C2H2 | Seed | zinc finger, X-linked, duplicated B | AGAGCTCCTTAAATATGGATGAGGTCTCAAGTGTAAGTGTGGGGCCATTG |
| ZYX | NT_007914:428 | NM_003461 | 7791 | Co-activator | Found | zyxin | CTGAGCCCATCATGCCTGAGCCTGGCCGAGATGAGACTGTGCGAGTGGTCGCC |