Wash. U. Human Transcription Factor Oligomers

Table of Human Transcription Factor Oligomers

Note: this table will be updated frequently. Check hg.wustl.edu for the latest updates. Reference: Messina D.M., Glassock J., Gish W., Lovett M. (2004) "An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression." Genome Res. Oct;14(10B):2041-7.

Gene_Abbrev	ScriptSure_ID	mRNA_ID	LocLink_ID	Class	Set	Description	Probe Sequence
AA125825		AA125825		Other	Seed		GCTTACCAATATTCTGAGAGGTAACAAATGGGATATGGGTTGAGACTGCA
AA634818		AA634818		Other	Seed		GGGCTGGCTCATCATCACAGCTTCTCTGCTCAGTGAGGAGACCATCATTG
AATF		NM_012138	26574	bZIP	Seed	apoptosis antagonizing transcription factor	TCCTTAGCAAGCTACTGAGTTTCATGGCACCTATTGACCATACTACAATG
AB002296	NT_033233:4	AB002296		Bromodomain	Found		TGACCTTAGCTTAACAGTTCTGAGACCACTAATGACAACCATGTCTGAGTT
AB058701	NT_025741:494	AB058701		ZnF-Other	Found		TGGCCATTTCAAGAGAGCGAGACATCTGGGCCCTCACAGTGCTGCCAACT
AB075831	NT_011139:311	AB075831		ZnF-C2H2	Found		CAGCAGCACCGGCGGTTGCACTTGCGGCCAGTCGCCTTTGCCCGCGCCCCC
ABT1		NM_013375	29777	Other	Seed	activator of basal transcription 1	AAGCGTGAGACCGACTTCTATCTTCAAAGTGTGGAACGGGGACAACGCTT
ADNP		NM_015339	23394	Homeobox	Seed	activity-dependent neuroprotector	AATGCATCTGAGAATGATGAGCGCTTATCTAACCCCCAGATTGAGTGGCA
AEBP2	NT_035211:21	NM_153207	121536	ZnF-C2H2	Found	AE(adipocyte enhancer)-binding protein 2	CTTCTCAGGGAGGGCTAGCTCGTCATGTACCCACACACTTCAGTCAGCAG
AF020591		NM_014480	27300	ZnF-C2H2	Seed	zinc finger protein	GCAATCAGTGCAATAAAGCCTTTGCAAGGAGCTCCTACCTTGTGATGCAT
AF093680		NM_013242	29105	Other	Seed	similar to mouse Glt3 or D. melanogaster transcription factor IIB	TCAGAGTGCAGATCCATGCAAATTGTCGCATCCGACGGGTTTACTTCTCA
AF5Q31		NM_014423	27125	Structural	Seed	ALL1 fused gene from 5q31	GCTGCAGATAAACGACTCACAGTACTTTGCCTGCGATGCGAGTCTTTGCT
AHR		NM_001621	196	bHLH	Seed	aryl hydrocarbon receptor	TGGACTACCCTATGGGGAGTTTTGAACCATCCCCATACCCCACTACTTCT
AHRR	NT_034766:39	NM_020731	57491	Co-repressor	Found	aryl hydrocarbon receptor repressor	CACCACCAGTCTGTGCGAATCGGAACTGCATGGAAAACCCAATTACTCAG
AI022870		AI022870		Other	Seed	catalytic subunit of DNA polymerase zeta	TGGCCAGGTCTCTAGGAGATAGCACAGAGACCAGAGCAAGGGACATCCCA
AI352508		AI352508		Other	Seed	Highly similar to DPOZ_HUMAN DNA POLYMERASE ZETA SUBUNIT	TTCTTCCAAGAATCCAACGTAGCTGAGTACCTTGTAACAAGTGCAGTCCA
AI569906		AI569906		ZnF-C2H2	Seed	Weakly similar to ZN42_HUMAN ZINC FINGER PROTEIN 42	CCTTTATGATGTTAGATGCTGGAATGAACAAGCCACTTGGCCCCCAAACC
AI808690		AI808690		Other	Seed	hypothetical protein	CCTATATGCCTAGTGCGGTTTCAGGTGCAGAAGCCGAGGCACTGCTCTTA
AIRE		NM_000383	326	ZnF-PHD	Seed	autoimmune regulator (automimmune polyendocrinopathy candidiasis ectodermal dystrophy)	TTCTACACTCCCAGCAAGTTCGAAGACTCCGGCAGTGGGAAGAACAAGGC
AK024238	NT_023124:29	AK024238		Homeobox	Found		CTGGCAATCCTAAGCACCAGTTGCAGGGAACTGGTCAGCAAGACACATCT
AK056369	NT_034877:1	AK056369		ZnF-C2H2	Found		TGATGGAAATATCCATGCAATTTGTGGAGTGCCCTCTCAACATGGGACTGAG
AK057375	NT_008389:5	AK057375		ZnF-C2H2	Found
AK074366	NT_005825:35	AK074366		ZnF-C2H2	Found		AGATCCCTGGGACACCGAGATTCTGAGAGGCATCAGTCAAGGTGGTGAGT
AK074859	NT_011150:41	AK074859		ZnF-C2H2	Found		AGCCGGGCACCTCTCGGAGGCCTCCGGACACAGCGGCCGTTGCAGAACAG
AK092811	NT_017568:327	AK092811		ZnF-C2H2	Found
AK096221	NT_035560:44	AK096221		ZnF-C2H2	Found
AK096288	NT_007819:700	AK096288		ZnF-C2H2	Found
AK098183	NT_011104:165	AK098183		ZnF-C2H2	Found		ACGGAACACACCCCAAGCGTACAGCCAAGCTTTACCTGCACCAAAAGGAG
AK122874	NT_011568:219	AK122874		ZnF-C2H2	Found
AK126753	NT_011176:418	AK126753		ZnF-C2H2	Found		ATGGGGAACCTTTCCTTTCTCTTCCAGTCTTTGGAAGGCACAGGGTATGACACA
AK128361	NT_011109:1283	AK128361		ZnF-C2H2	Found		GCATCACTTGCAAAATCAAAGTATTCAGAAGAGTGTGAAACAGTGCCATGAACAG
AKAP9	NT_007933:1231	NM_005751	10142	Co-repressor	Found	A kinase (PRKA) anchor protein (yotiao) 9	CCAGGCACTCCAGCTGATTTCAATCCTGGTTCTTTAGCATGTTCTCAGCTTCAGA
ALF		NM_006872	11036	Other	Seed	TFIIA-alpha/beta-like factor	CTGTTTGACACGGATAATGTAATTGTCTGTCAGTATGATAAGATTCATCG
ALX3		NM_006492	257	Homeobox	Seed	aristaless-like homeobox 3	CACAGCTTTGAGCCTTCCTCAGATGGTGACTATAAGTCTCCAAGCCTCGT
ALX4		NM_021926	60529	Homeobox	Seed	aristaless-like homeobox 4	TTGGGCAGATGCAGCAGGTTCGAACCCACTTCTCCACTGCATATGAGCTG
ALY		AF047022	10189	Co-activator	Seed	THO complex 4	GGTCGTACAAACTGCATCAGGAGATATGCCAACATATCAGATCCGAACTA
AMOT	NT_011783:8	NM_133265	154796	bZIP	Found	angiomotin	ACTGCCCGTTCTACCAATGAGGACCAAAGACGACACATCGAAATCCGAGA
ANP32A		NM_006305	8125	Co-activator	Seed	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	AATTCTTAAGTACAATCAACGTAGGCCTCACCTCAATCGCAAACTTACCA
APA1		NM_021188	57862	ZnF-C2H2	Seed	likely ortholog of mouse another partner for ARF 1	TGGAGAGTCCTTGAACCTACCAAATACCAATTCTATCCTGGGAGTTGATG
Apg4B		NM_013325	23192	Other	Seed	Apg4/Aut2 homolog 2 (yeast)	CCAGGCGCCGGTTCTGTGGTTGGTTTGGAATTAAAGTCCTGTTTGAAGTT
AR		NM_000044	367	NHR	Seed	androgen receptor (dihydrotestosterone receptor)	AGCTGCATCAGTTCACTTTTGACCTGCTAATCAAGTCACACATGGTGAGC
ARC		NM_015193	23237	Other	Seed	activity-regulated cytoskeleton-associated protein	GCTCCGTGAAGAACTGGGTGGAGTTCAAGAAGGAGTTCCTGCAGTACAGC
ARID1A	NT_028053:228	NM_006015	8289	Structural	Found	AT rich interactive domain 1A (SWI- like)	CTCCTGGGCTTCCTAGAGGACAGCCTTGCCGCCACACAGTTCCAGCAGAGCCA
ARIH2		NM_006321	10425	ZnF-Other	Seed	ariadne (Drosophila) homolog 2	CCAGATGCATATAGCGGAGCAGCGGAGGAGAACCCTGCTGAAAGATTTCC
ARIX		NM_005169	401	Homeobox	Seed	aristaless homeobox	AAGGAGCTGGAGCGCGTTTTCGCTGAGACCCACTACCCCGACATTTACAC
ARNT		NM_001668	405	bHLH	Seed	aryl hydrocarbon receptor nuclear translocator	CATCATCGTTCAAGTTCTAGTGAGCAACATGTTCAACAACCGCCAGCACA
ARNT2		NM_014862	9915	bHLH	Seed	aryl-hydrocarbon receptor nuclear translocator 2	CTGTCGGTCATGTATCGATTTCGCACCAAGAACCGGGAGTGGATGTTGAT
ARNTL		NM_001178	406	bHLH	Seed	aryl hydrocarbon receptor nuclear translocator-like	CCACATAGGTATAGACATGATTGACAACGACCAAGGATCAAGTAGTCCCA
ARNTL2	NT_035213:171	NM_020183	56938	bHLH	Found	aryl hydrocarbon receptor nuclear translocator-like 2	CCTGCCTTGTGGCCATTGGAAGATTACAGCCATATATTGTTCCACAGAACAGTGG
ARX	NT_025940:10	NM_139058	170302	Homeobox	Found	aristaless related homeobox	TCCAGAACCGTCGGGCCAAGTGGCGCAAGCGGGAGAAGGCAGGCGCGCAG
ASCL1		NM_004316	429	bHLH	Seed	achaete-scute complex (Drosophila) homolog-like 1	ACAAGAAGATGAGTAAGGTGGAGACACTGCGCTCGGCGGTCGAGTACATC
ASCL2		NM_005170	430	bHLH	Seed	achaete-scute complex (Drosophila) homolog-like 2	AGCAAGAAGCTGAGCAAGGTGGAGACGCTGCGCTCAGCCGTGGAGTACAT
ASCL3		NM_020646	56676	bHLH	Seed	achaete-scute complex (Drosophila) homolog-like 3	ATCTTCCCTGATTCTGCCCGCTTGCCACTGACCAGGTCCTTCTATCTGGA
ASH1		NM_018489	55870	ZnF-PHD	Seed	hypothetical protein ASH1	AGGAACTAATAAGTCGCCTAAGTGAAATTCGGATCACTCATCGAAGTCAT
ASH2L		NM_004674	9070	Structural	Seed	ash2 (absent, small, or homeotic, Drosophila, homolog)-like	GACCATGCTTCAAGTATCCTCCGAAGGATCTCACTTACCGCCCTATGAGT
ATBF1		NM_006885	463	ZnF-C2H2	Seed	AT-binding transcription factor 1	AGACGAGGGCAACGCAGATAACGACAGTGCAACGGGAATAGCAACTGAAA
ATF1		NM_005171	466	bZIP	Seed	activating transcription factor 1	GTGACTCTCACCTCTCAGACAACTAAGACAGATGACCCCCAATTGAAAAG
ATF2		NM_001880	1386	bZIP	Seed	activating transcription factor 2	ATTTCAGTGCCGAGTAGTCCACATACGGAAGCTATACAGCATAGTTCGGT
ATF3		NM_001674	467	bZIP	Seed	activating transcription factor 3	GCAGCATTTGATATACATGCTCAACCTTCATCGGCCCACGTGTATTGTCC
ATF4		NM_001675	468	bZIP	Seed	activating transcription factor 4 (tax-responsive enhancer element B67)	AGATAGGAAGCCAGACTACACTGCTTACGTTGCCATGATCCCTCAGTGCA
ATF5		NM_012068	22809	bZIP	Seed	activating transcription factor 5	TGGCAGGTGATGGCTTCTCTGACTGGATGACTGAGCGAGTTGATTTCACA
ATF6		NM_007348	22926	bZIP	Seed	activating transcription factor 6	CTTGTCAGCCCCTAATTAATACAACAGAGTCTCTCAGGTTAAATCATGAA
ATF7		NM_006856	11016	bZIP	Seed	activating transcription factor 7	GCCAAGATGAGACTGAAAGCCACCCTAACTCACCAAGTCTCCTCAATCAA
ATF7IP		NM_018179	55729	Co-activator	Seed	activating transcription factor 7 interacting protein	GCTGTTCGGCAGGTCAATCCCCAAAATAGTGTTACAGTTCGAGTGCCTCA
ATOH1		NM_005172	474	bHLH	Seed	atonal homolog 1	GTCCAAATATGAGACCCTGCAGATGGCCCAAATCTACATCAACGCCTTGT
ATOH7		NM_145178	220202	bHLH	Seed	atonal homolog 7 (Drosophila)	CGGCGGCCCAGGATTCTAAGGATGCAATCCTCGAGGAAAATTAGTCGATT
ATRX		NM_000489	546	ZnF-PHD	Seed	alpha thalassemia/mental retardation syndrome X-linked (RAD54 (S. cerevisiae) homolog)	CAAAATGCTCTTAAGGAAGAGGAAGAGAGACGAAAACGTATTGCTGAGAG
AW451453		AW451453		Other	Seed		ATCCTTGGGATATATTGGCGGAAGTTGGAGGCGTCATGCATCGCCTCCTG
AW875035		AW875035		ZnF-C2H2	Seed	Moderately similar to YY1, Very very hypothetical protein RMSA-1	CTCTGTAATAGCTCCAGGCCAAGAGTTGTTGCCTCACGCCACCTATCAGA
AWP1		NM_019006	54469	ZnF-AN1	Seed	protein associated with PRK1	GTGGTGTACACCGTTACTCAGATGTACACAATTGCTCTTACAATTACAAA
AY026053	NT_011519:29	AY026053		Heat Shock	Found		GGGTCTCCATTGTGTGAACACATAATCCCTGGGGATTCAGACTTAAGGTCAATGA
BA044953	NT_005825:31			ZnF-C2H2	Found
BACH1		NM_001186	571	bZIP	Seed	BTB and CNC homology 1, basic leucine zipper transcription factor 1	CATTCAATGCACAACGGATAATTTCACTGTCTCGAAATGATTTTCAGTCC
BACH2		NM_021813	60468	bZIP	Seed	BTB and CNC homology 1, basic leucine zipper transcription factor 2	AAATGACTGATAAGTGTACAACTGACGAACAGCCCAGGAAAGATTATACC
BAGE2	NT_029490:10	NM_182482	85319	ZnF-PHD	Found	B melanoma antigen family, member 2
BANP		NM_017869	54971	Co-activator	Seed	BANP homolog, SMAR1 homolog	TCACAGAATCCGACTGGTACCGAATCAAGCAGAGCATCGACTCCAAGTGC
BAPX1		NM_001189	579	Homeobox	Seed	bagpipe homeobox (Drosophila) homolog 1	GGCCCCAGAGGTGCACACGTGTCCGCGCTGTGCAGCGGGGCCGGCGGCGG
BARHL1		NM_020064	56751	Homeobox	Seed	BarH (Drosophila)-like 1	AGCTGGACAAAAGTGGCAGCAACGCCTCATCGGACTCTGAGTATAAAGTG
BARHL2		AJ251753	56750	Homeobox	Seed	BarH (Drosophila)-like 2	CAGGGAACTACTCGGCGCTGCAGAGGATGTTTCCATCGCCTTATTTCTAT
BARX1		NM_021570	56033	Homeobox	Seed	BarH-like homeobox 1	GAGAAACGCTTCGAGAAGCAGAAGTACCTTTCCACGCCGGACAGAATAGA
BARX2		NM_003658	8538	Homeobox	Seed	BarH-like homeobox 2	AAGCAGAAGTATTTGTCAACCCCAGACAGGTTGGACTTGGCTCAGTCTCT
BATF		NM_006399	10538	bZIP	Seed	basic leucine zipper transcription factor, ATF-like	GAGATCAAGCAGCTCACAGAGGAACTGAAGTACTTCACGTCGGTGCTGAA
BAZ1A		NM_013448	11177	Bromodomain	Seed	bromodomain adjacent to zinc finger domain, 1A	AATGTCGACCAAAGCAACGTTGTAGAAGACTGTCCTTTAGACAGAGACCA
BAZ1B		NM_023005	9031	Bromodomain	Seed	bromodomain adjacent to zinc finger domain, 1B	CAAACTAGTCATGCGCAGGACTCCTATTGGCACAGATCGAAACCATAATA
BAZ2A		NM_013449	11176	Bromodomain	Seed	bromodomain adjacent to zinc finger domain, 2A	TACAGAGATATCATATGAGATCACCCCTCGCATTCGTATCTGGCGCCAGA
BAZ2B		NM_013450	29994	Bromodomain	Seed	bromodomain adjacent to zinc finger domain, 2B	AACATTGAAAGAAGAATTGAGGAAGATATTGCTCCAGGGCTCAGGGTGTG
BC006361	NT_004350:22	BC006361		bHLH	Found
BC012905	NT_011535:14	BC012905		ZnF-C2H2	Found		ATTGATGGTGTTGCAGCCGCTCTTCACGAACACGGGCTATGGCGACCACG
BC015765	NT_035560:36			ZnF-C2H2	Found
BC017109	NT_011109:1373	BC017109		ZnF-C2H2	Found
BC033211	NT_024812:36	BC033211		Structural	Found		ATCTACTGCGAGCAGGACCGCGCGCTGGTGTGCGGAGTGTGCGCCTCACT
BC046415	NT_033317:123	BC046415		ZnF-C2H2	Found
BC046449	NT_011109:1469	BC046449		ZnF-C2H2	Found
BC052269	NT_011333:181	BC052269		ZnF-C2H2	Found		GCGAGCTGCCTTCTGCCAAGGACGGTGCAGTACAGAACTCTTTCTCAGAG
BC052625	NT_007914:856	BC052625		ZnF-C2H2	Found		CTTCAGCTCCAAAACCAACCTAGTCCGCCACCAGGCGATCCACACAGGCT
BCL11A		NM_018014	53335	ZnF-C2H2	Seed	B-cell CLL/lymphoma 11A (zinc finger protein)	ACACATGAAAAAATGGCACAGTGATCGAGTGTTGAATAATGATATAAAAA
BCL11B		NM_022898	64919	ZnF-C2H2	Seed	B-cell CLL/lymphoma 11B (zinc finger protein)	AACACATGAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGACGTCAAA
BCL3		NM_005178	602	Co-activator	Seed	B-cell CLL/lymphoma 3	GAGGGGAGAGGTGGGCCGTAACGGGCACGGATCACGATGTAAATTATTAA
BCL6		NM_001706	604	ZnF-C2H2	Seed	B-cell CLL/lymphoma 6 (zinc finger protein 51; Drosophila kr�ppel homolog)	GAAACCTTACCATTGTGAGAAGTGTAACCTGCATTTCCGTCACAAAAGCC
BCL6B	NT_010823:135	NM_181844	255877	ZnF-BTB/POZ	Found	B-cell CLL/lymphoma 6, member B (zinc finger protein)	CACTGCGACCCCTGTGGCCTGCATTTCCGGCACAAGAGTCAACTGCGGCTG
BG199677		BG199677		Other	Seed		ATGCTGATGCCACGGGACCATGGAACAGTGCCACTATTTCCAAGAGCAAC
BHC80	NT_009178:48	NM_016621	51317	ZnF-PHD	Found	BRAF35/HDAC2 complpex (80 kDa)	AGCAATTCCATAAGTAAATGCATGGAAATGAAGAACACCATCCTGGCCCGGC
BHLHB2		NM_003670	8553	bHLH	Seed	basic helix-loop-helix domain containing, class B, 2	GCTCCAAGCTCTGAAGCCAATCCCCCCTTTAAACTTAGAAACCAAAGACT
BHLHB3		NM_030762	79365	bHLH	Seed	basic helix-loop-helix domain containing, class B, 3	TGAAATCGCCCATTCAGTCCGACTTGGATGCGTTCCACTCGGGATTTCAA
BHLHB5		NM_152414	27319	bHLH	Seed	basic helix-loop-helix domain containing, class B, 5	GTTTAACAGCGTCTCCTCCAGCCTCTGCAAACAGTGCACGGAGAAGCCTT
BIA2	NT_029870:6	NM_015431	25893	Co-activator	Found	BIA2 protein	TGCGAGGAGGACGAGGCGGCGCTGTGCTGGGTGTGCGACGCCGGCCCCGA
BLZF1		NM_003666	8548	bZIP	Seed	basic leucine zipper nuclear factor 1 (JEM-1)	GTTGGCATTAACAATCAAAAAAAGATTCCATCAACAGTTGAATTCTGCAG
BMI1		NM_005180	648	ZnF-Other	Seed	murine leukemia viral (bmi-1) oncogene homolog	AGGAACCTTTAAAGGATTATTATACACTAATGGATATTGCCTACATTTAT
BNC		NM_001717	646	ZnF-C2H2	Seed	basonuclin	GAAGATCAAGCATAAGTGCACCATCGAAGGGTGTAACATGGTGTTCAGCT
BRD1		NM_014577	23774	Bromodomain	Seed	bromodomain-containing 1	TCCTAAGTCCAAAATGGTTCCCCTTGGTATTGACGAAACTATAGACAAGT
BRD2		NM_005104	6046	Bromodomain	Seed	bromodomain-containing 2	GAAAAAGCGGGAATTAGAAAAGCGGTTACAAGATGTCAGCGGACAGCTCA
BRD3		NM_007371	8019	Bromodomain	Seed	bromodomain-containing 3	TCTACCAGCCCGTGGACGCAATCAAATTGAACCTGCCGGATTATCATAAA
BRD4		NM_014299	23476	Bromodomain	Seed	bromodomain-containing 4	GAAAAAAGAAAAGCACAAAAGAAAAGAGGAAGTGGAAGAGAATAAAAAAA
BRD7		NM_013263	29117	Bromodomain	Seed	bromodomain-containing 7	ATTTGAATTATGGGCCCTACAGTTCTTATGCACCGCATTATGACTCCACA
BRD9	NT_034766:148	NM_023924	65980	Bromodomain	Found	bromodomain containing 9
BRDT		NM_001726	676	Bromodomain	Seed	bromodomain, testis-specific	AAAGCGGTTACTGGATGTTAATAATCAGTTAAATTCTAGAAAACGTCAAA
BRF1		NM_001519	2972	Other	Seed	BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)	ATCTACAAGGAACACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCAAT
BRF2		NM_006887	678	ZnF-C3H	Seed	zinc finger protein 36, C3H type-like 2	CACACTTCTGTCCGCCTTCTACGATGTCGACTTCTTGTGCAAGACAGAGA
BRPF1		NM_004634	7862	Bromodomain	Seed	bromodomain and PHD finger containing, 1	AAGGAGTCGTACTTTGAGAGTCATAATAAAGGCGACCCTAATGCGCTAGT
BRPF3		AB033112	27154	Bromodomain	Seed	bromodomain and PHD finger containing, 3	TGGAAAACACACCGAAAGCGGGTCTGACTCTGAATGTAGTTTGGGTCTCA
BS69		NM_006624	10771	ZnF-MYND	Seed	adenovirus 5 E1A binding protein	TGGACAGAAAATGTAAGCAAGTAAAGGAAAAGTGTAAGGAGGAATTTGTA
BTAF1		AF038362	9044	Other	Seed	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)	GCCCATCGCATTGGGCAGAAACGTGTGGTTAACGTATACCGATTGATAAC
BTBD1	NT_019601:32	NM_025238	53339	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 1	CCTGCTCAATCTGGAATTTTGTCAGATCGTGAAGTGGTAAACCTCTTTCTTCA
BTBD14A	NT_019501:127	NM_144653	138151	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 14A	CGACCTCGTGGCCCTACCTGCCAGCCTCATCAGCCAGATCGGATACCGCT
BTBD14B	NT_031915:27	NM_052876	112939	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 14B	CCCTGGACAGCCGCGTGCTCCACGCTGTCAAGTACTACTGCCAGAACTTC
BTBD2	NT_011268:135	NM_017797	55643	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 2	CGCACAGGTTCGTGCTGGCCGTGGGCAGCGCCGTCTTTGATGCCATGTTC
BTBD3		NM_014962	22903	ZnF-BTB/POZ	Seed	BTB (POZ) domain containing 3	GCAATACCTTTCCCGTATGGTTTGAATACCCAGTGCAGATCGAGCCAGAC
BTBD4	NT_033241:138	AK023564	140685	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 4	AAGCTGGAGAAAGAGGCCAAGATTTTTCTGCACACGGAGTGTGGGGATAG
BTBD4	NT_033241:138	AJ325128	65986	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 4
BTBD5	NT_025892:1650	NM_017658	54813	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 5	GGCTTGAATCTTCTTCGCCAACATCACGAACTCTGTGACATCATTCTCCGA
BTBD6	NT_022676:116	NM_033271	90135	ZnF-BTB/POZ	Found	BTB (POZ) domain containing 6
BTEB1		NM_001206	687	ZnF-C2H2	Seed	basic transcription element binding protein 1	AAATCCTCCCATCTCAAAGCCCATTACAGAGTGCATACAGGTGAACGGCC
BTF		NM_014739	9774	Other	Seed	Bcl-2-associated transcription factor	ATACTGGTCCAAACAACTCAAATACTACTTTTCAAAAGAGACCGAAGGAA
BTF3		NM_001207	689	Other	Seed	basic transcription factor 3	GGAAAAGCACCACTTGCTACTGGAGAGGATGATGATGATGAAGTTCCAGG
BTF3L1		NM_001208	690	Other	Seed	basic transcription factor 3, like 1	AGGAAAAAGGTGGTTCACACGACAGCAGAGGATAAAAAATTTCAGTTCTC
BTF3L2		M90355	691	Other	Seed	basic transcription factor 3, like 2	AGCAAATGATAAAAAACGTCAGTTCTCCTTAAAGAAGTTAGAAATCTCTG
BTF3L3		M90356	692	Other	Seed	basic transcription factor 3, like 3	CGCTTATATCTGGCGCTGGCAATAGCTGATAATCGATGCACATTAATTGC
BX538183	NT_011109:1331	BX538183		ZnF-C2H2	Found		GCCACAGTTCTTCAGTTTCGCCACTTCAAAGAATTTACTCTGGGGTCAAAACCCA
BX648737	NT_006802:14	BX648737		ZnF-C2H2	Found		CCCGTTCACAGCAGTATTCAGTTCTCTTTAAACAACTGGGGGTCAACACAGTGCG
C11orf13		NM_003475	8045	Other	Seed	chromosome 11 open reading frame 13	TGGTCATCGCACTAGCCCAAGCAATAGGCCAGACTGGCCGCTTTGTGCTT
C11orf9		NM_013279	745	Other	Seed	chromosome 11open reading frame 9	TGGGGTCTTTCAGTCAATGGCATTGGCCACTCCAAGCATCACAAGAGTCT
C14orf101		NM_017799	54916	Other	Seed	chromosome 14 open reading frame 101	GCTCAACTCTACGCTCAAGCATATGACCTTTATAAGGAGATTGTCTATTT
C14orf106		NM_018353	55320	Other	Seed	chromosome 14 open reading frame 106	CACTCCTAACAGAGTTGAAAAAAAAAATTGCAGCATACCTACCTATGTGA
C16orf44	NT_010422:242	NM_024731	79786	ZnF-BTB/POZ	Found	chromosome 16 open reading frame 44	GGCAGACGCGAGTGTCTCGGCCATACAAGATCAGCGAATCATCAAAGGTATA
C1orf2		NM_006589	10712	Other	Seed	chromosome 10 open reading frame 2	GGGCTCACCATTTGTGCCGCTATAATCTGTACACTCTCTGCTATTGTCTG
C20orf174		AL713683	128611	ZnF-C2H2	Seed	chromosome 20 open reading frame 174	TGTGCCTGGTGCGTTTGCTGTGGAGATCTCTGAGACTGTCGGTTTTTCTA
C21orf18		NM_017438	54093	Other	Seed	chromosome 21 open reading frame 18	AGCGTTTAATGAAGAAACTCATTCTTACGAAATTAGAACGACTTCACGTT
C3IP1	NT_034563:155	NM_021633	59349	ZnF-BTB/POZ	Found	kelch-like protein C3IP1
C5orf7		NM_016604	51780	Jumonji	Seed	chromosome 5 open reading frame 7	GTTCGGGATTTCTGGGATGGTTTCGAGATCATATGCAAACGACTACGGTC
CART1		NM_006982	8092	Homeobox	Seed	cartilage paired-class homeoprotein 1	TGTATGACACCTTATTCTCACTCGCCTCGGACAGATTCCAGTTACACGGG
CBF2		NM_005760	10153	Beta-scaffold-CCAAT	Seed	CCAAT-box-binding transcription factor	GGATTTCACTCTAATGAGATTTTTGGATCGATTTGTATACCGAAATCCAA
CBFA2T1		NM_004349	862	ZnF-MYND	Seed	core-binding factor, runt domain, alpha subunit 2; translocated to, 1; cyclin D-related	AAGAATTGAATTACTGGATCCGGCGGTACAGTGACGCCGAGGACTTAAAA
CBFA2T2	NT_028392:284	NM_005093	9139	ZnF-MYND	Found	core-binding factor, runt domain, alpha subunit 2; translocated to, 2	CAGTTCTGCGGCGCTGTCAGGAATCAGATCGTGAAGAACTCAACTACTGGA
CBFA2T3		NM_005187	863	ZnF-MYND	Seed	core-binding factor, runt domain, alpha subunit 2; translocated to, 3	CCCACGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTCTGTCTCTTG
CBX1		NM_006807	10951	Structural	Seed	chromobox homolog 1 (Drosophila HP1 beta)	ACAGCACATGAGACAGATAAATCAGAGGGAGGCAAGCGCAAAGCTGATTC
CBX2		X77824	876	Structural	Seed	chromobox homolog 2 (Drosophila Pc class)	CTTACTCCCCTTCCCTGCCTATGGTGTCGCTTGGCTAAGTGACTCCCAGC
CBX3		NM_007276	11335	Structural	Seed	chromobox homolog 3 (Drosophila HP1 gamma)	GAAAATTTAGATTGTCCAGAATTGATTGAAGCGTTTCTTAACTCTCAGAA
CBX4		NM_003655	8535	Structural	Seed	chromobox homolog 4 (Drosophila Pc class)	GAATATAATTATCACCGACGTCACCGCGAACTGCCTCACCGTTACTTTCA
CBX5		NM_012117	23468	Structural	Seed	chromobox homolog 5 (Drosophila HP1 alpha)	GGTGCTAGACAGGCGCGTGGTTAAGGGACAAGTGGAATATCTACTGAAGT
CBX6		NM_014292	23466	Structural	Seed	chromobox homolog 6	CCTGACGGTCACAATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGG
CBX7		NM_175709	23492	Structural	Seed	chromobox homolog 7	AGAGAGACCGAGCATCGGGGTATAGGAAGAGAGGTCCGAAACCCAAGCGG
CBX8		NM_020649	57332	Structural	Seed	chromobox homolog 8 (Drosophila Pc class)	ACCTCAAACTTTTTGACCGTCACCATTAAGGAAAGTAACACGGACCAAGG
CCT4		NM_006430	10575	Co-activator	Seed	chaperonin containing TCP1, subunit 4 (delta)	ACTGAATATTCACGAACACTGAGTGGTATGGAATCCTACTGCGTTCGTGC
CDK5	NT_007914:1050	NM_004935	1020	Co-activator	Found	cyclin-dependent kinase 5
CDK7		NM_001799	1022	Co-activator	Seed	cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase)	AGCTTTGGCAATAAAAAGGAAAAGAACAGAGGCCTTAGAACAAGGAGGAT
CDK8		NM_001260	1024	Co-activator	Seed	cyclin-dependent kinase 8	TCAGGTGGACTTATCATGACCTCAGACTATCAGCGTTCCAATCCACATGC
CDR2		M63256	1039	Co-repressor	Seed	cerebellar degeneration-related protein 2, 62kDa	GCTGTATGACCTCCGCCAACACTTCGTGTATGATCATGTGTTCGCTGAGA
CDX1		NM_001804	1044	Homeobox	Seed	caudal-type homeobox transcription factor 1	GAGAAGGAGTTTCATTACAGCCGTTACATCACAATCCGGCGGAAATCAGA
CDX2		NM_001265	1045	Homeobox	Seed	caudal-type homeobox transcription factor 2	GGGCTCTCTGAGAGGCAGGTTAAAATCTGGTTTCAGAACCGCAGAGCAAA
CDX4		NM_005193	1046	Homeobox	Seed	caudal-type homeobox transcription factor 4	TGCTGTTCGTGGATTTCAACCTATTGAGATACAGCAGGTTATAGTCTCCG
CEBPA		NM_004364	1050	bZIP	Seed	CCAAT/enhancer binding protein (C/EBP), alpha	AACGTGGAGACGCAGCAGAAGGTGCTGGAGCTGACCAGTGACAATGACCG
CEBPB		NM_005194	1051	bZIP	Seed	CCAAT/enhancer binding protein (C/EBP), beta	TGCCTTTAAATCCATGGAAGTGGCCAACTTCTACTACGAGGCGGACTGCT
CEBPD		NM_005195	1052	bZIP	Seed	CCAAT/enhancer binding protein (C/EBP), delta	AACCAGGAGATGCAGCAGAAGTTGGTGGAGCTGTCGGCTGAGAACGAGAA
CEBPE		NM_001805	1053	bZIP	Seed	CCAAT/enhancer binding protein (C/EBP), epsilon	TGGCCCCTTACACAAGGGCAAGAAGGCAGTGAACAAAGATAGCCTTGAGT
CEBPG		NM_001806	1054	bZIP	Seed	CCAAT/enhancer binding protein (C/EBP), gamma	ACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACAG
CECR6		NM_031890	27439	Bromodomain	Seed	cat eye syndrome chromosome region, candidate 6	GGGGTGCTCATGGCTATGTCAACACCCTGGCTGTGGCCTCTCAGAATTGA
CERD4		NM_012074	8110	ZnF-PHD	Seed	D4, zinc and double PHD fingers, family 3	GAGGATTTGGAAGAGGATATTCCCAAGCGAAAGGACAGGACTAGAGGACG
CEZANNE		NM_020205	56957	Co-repressor	Seed	cellular zinc finger anti-NF-kappaB Cezanne	TGATAGTGACAATGTCCGATTGGCCAGTGTAATTCTGTCCCTAGAGGTCA
CG9879		AI217897		Other	Seed	CG9879 (fly) homolog	TCAGTCTCGGCAGAAGAGAAGTGGGTTAAAGACTCCACCACCCGAAGGCA
CGI-149		NM_016079	51652	Other	Seed	CGI-149 protein	TGGGATCATAGAGGAGATGTTAGAGGACACTTTTGAAAGCATGGACGATC
CGI-85		NM_017635	54794	Structural	Seed	CGI-85 protein	CTCCAGCTAAGCGCTTGAGGTTAATAGTTGGAAAAGACTCTATAGATATT
CGI-99		NM_016039	51637	Other	Seed	CGI-99 protein	GCGTCATGATGATTACCTGGTAATGCTTAAGGCAATTCGGATTTTGGTTC
CHD1		NM_001270	1105	Structural	Seed	chromodomain helicase DNA binding protein 1	TGTTTACATTGTACACTGCGACCACCTTGCCGCTTTTCATCACAAGCTTG
CHD1L		NM_024568	9557	Structural	Seed	chromodomain helicase DNA binding protein 1-like	TCTGCTGAGCTGGATTACCAAGACCCAGATGCTACTTCCCTCAAGTACGT
CHD2		NM_001271	1106	Structural	Seed	chromodomain helicase DNA binding protein 2	CTGAAAATCGGAGACCGGATAGCCGAGTGCCTTAAAGCCTACTCAGATCA
CHD3		NM_001272	1107	Structural	Seed	chromodomain helicase DNA binding protein 3	CGGAATCTAGGCAAGGGCAAGCGGGTTCGCAAGCAAGTTAACTACAATGA
CHD4		NM_001273	1108	Structural	Seed	chromodomain helicase DNA binding protein 4	GCATGTCCTTACTAGAATTGGTGTTATGTCTTTGATTCGCAAGAAGGTTC
CHD5		NM_015557	26038	Structural	Seed	chromodomain helicase DNA binding protein 5	ATTGTCAACTACAACCAGATGCCCCTGGGGCCCTATGTGACCGATATCTA
CHD6		NM_032221	84181	Structural	Seed	chromodomain helicase DNA binding protein 6	AGCCAAGCCGAGAAATCCATTCCCAGCAAGAGTCTGCTTGACTGGCTAAG
CHES1		NM_005197	1112	Forkhead	Seed	checkpoint suppressor 1	GCCAGTGCCATGATGCTTTTGAATACTCCCCCTGAGATACAAGCAGGTTT
CHX10		XM_063425	122965	Homeobox	Seed	ceh-10 homeo domain containing homolog (C. elegans)	AACAGCATTGCGGTGCTCCGGGCCAAAGCTCAGGAGCACAGCACCAAAGT
CIAO1		NM_004804	9391	Co-repressor	Seed	WD40 protein Ciao1	TGGCGTCTTGTAGTGATGACCGTACTGTGCGTATCTGGCGTCAGTATCTA
CIC		NM_015125	23152	Beta-scaffold-HMG	Seed	capicua homolog (Drosophila)	TCCAAGGTTTGTCTGCAGTTGAAGATCCGTGAGGTGCGCCAGAAGATCAT
CIR		NM_004882	9541	Co-repressor	Seed	CBF1 interacting corepressor	AATCACATTCATTATTTCTCAGGTTCGAAATGTGAGGTGCATTAAATGTC
CITED1		NM_004143	4435	Other	Seed	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1	CTGGGGCAGAATGAGTTTGACTTCACTGCGGACTTTCCATCTAGCTGCTA
CITED2		NM_006079	10370	Other	Seed	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	GGCTGGGGCAAAACGAGTTTGATTTTATGACGGACTTCGTGTGCAAACAG
CIZ1	NT_029366:585	NM_012127	25792	ZnF-C2H2	Found	Cip1-interacting zinc finger protein	CACCAGCAGCGGCTAGGGGAGATCCAGCACATGAGCCAAGCCTGCCTCCT
CLOCK		NM_004898	9575	bHLH	Seed	clock (mouse) homolog	GACACAGAGCACTCTTACAGCCCCACTGTATAACACTATGGTGATTTCTC
CNOT3		NM_014516	4849	Other	Seed	CCR4-NOT transcription complex, subunit 3	AGGCCCTAAAGAAGCAGTCATGGCGATTCCACACCAAGTACATGATGTGG
CNOT4		NM_013316	4850	Other	Seed	CCR4-NOT transcription complex, subunit 4	CCAGCAAAACCCCCACAGATTTACTACAGAGTTCAACACTGGACCGCCAT
CNOT8		NM_004779	9337	Other	Seed	CCR4-NOT transcription complex, subunit 8	GAGGAACATGAATTCTTACATATTCTGAACCTTTTCTCCCCATCCATTTA
COPEB		NM_001300	1316	ZnF-C2H2	Seed	core promoter element binding protein	CAAGTTTACCTCCGACCCCATTGGCGAAGTTTTGGTCAGCTCGGGAAAAT
COPS5		NM_006837	10987	Co-activator	Seed	COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)	TGGGACGAGGGAGTTTCATGTTGGGTTTAGAAACGCATGACCGAAAATCA
CORO1A		NM_007074	11151	bZIP	Seed	coronin, actin-binding protein, 1A	ATCACTTCCGAGGCCCCTTTCCTGCACTATCTCTCCATGTTCAGTTCCAA
CREB1		NM_004379	1385	bZIP	Seed	cAMP responsive element binding protein 1	GGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGC
CREB3		NM_006368	10488	bZIP	Seed	cAMP responsive element binding protein 3 (luman)	GATGGCTTCCTACTGGTAGCCCCTCTGTCATTTTGCAGGACAGATACTCA
CREB3L1		NM_052854	90993	bZIP	Seed	cAMP responsive element binding protein 3-like 1	AGAACAATGAACTGTGGAAGAAGGTGGAGACCCTGGAGAATGCCAACAGG
CREB3L2	NT_007933:5606	NM_194071	64764	bZIP	Found	cAMP responsive element binding protein 3-like 2	GTGAGATCCAGAAACCTGCTGATCTACGAGGAACATTCTCCCCCAGAGGAG
CREB3L3	NT_011255:184	NM_032607	84699	bZIP	Found	cAMP responsive element binding protein 3-like 3	GATCCGGTGGACCTGTCCCCACGATGCAATCTCACCGTGAAAGACCTCCT
CREB3L4	NT_004858:17	NM_130898	148327	bZIP	Found	cAMP responsive element binding protein 3-like 4	GGCCAAATGTAGGCCTTATCTCCATCCAGCTAGATCAGTGGAGCCCAGCA
CREB5		NM_004904	9586	bZIP	Seed	cAMP responsive element binding protein 5	CCAGCATAATACCATCACTACTTCCTCATCGGTCAGCGAGGTGGTAGGAA
CREBBP		NM_004380	1387	ZnF-PHD	Seed	CREB binding protein (Rubinstein-Taybi syndrome)	CAACATGGCGAGTATGAATCCACAGTACCGAGAAATGTTACGGAGGCAGC
CREBL1		NM_004381	1388	bZIP	Seed	cAMP responsive element binding protein-like 1	GATGACCCAACATCCTCATTTGAAACCGTCCAGATCAACGTTATCCCCAC
CREBL2		NM_001310	1389	bZIP	Seed	cAMP responsive element binding protein-like 2	GATATCAGTATTTGGAAGAGTTGGTATCCAGTCGAGAAAGAGCTATATGT
CREG		NM_003851	8804	Other	Seed	cellular repressor of E1A-stimulated genes	AGCCATAATTGGTTCTTTGCTAAGTTGAATATAACCAATATCTGGGTCCT
CREM		NM_001881	1390	bZIP	Seed	cAMP responsive element modulator	AGCTGTAACTCTAGTGCAGTTACCTTCGGGCCAAACTATACATGTCCAGG
CRIP1		NM_001311	1396	Co-activator	Seed	cysteine-rich protein 1 (intestinal)	CGGAGCCGTCATGCCCAAGTGTCCCAAGTGCAACAAGGAGGTGTACTTCG
CRIP2		NM_001312	1397	Co-activator	Seed	cysteine-rich protein 2	CAAATGCCCCAAGTGCGACAAGACCGTGTACTTCGCCGAGAAGGTGAGCT
CROC4		NM_006365	10485	Other	Seed	transcriptional activator of the c-fos promoter	GGAGACCAAAAAGAAGAATGTACTTCATCTGGTTGGGCTGGATTCCCTCT
CRSP2		NM_004229	9282	Co-activator	Seed	cofactor required for Sp1 transcriptional activation, subunit 2, 150kD	GGCAGACATTCCCAGACAGCAGAACTCTTCTGTTGCTGCTCCCATGATGG
CRSP3		NM_004830	9439	Co-activator	Seed	cofactor required for Sp1 transcriptional activation, subunit 3, 130kD	TGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCATGCGATCATTGGC
CRSP6		NM_004268	9440	Co-activator	Seed	cofactor required for Sp1 transcriptional activation, subunit 6, 77kD	GTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
CRSP7		NM_004831	9441	Co-activator	Seed	cofactor required for Sp1 transcriptional activation, subunit 7, 70kD	CGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCATGACGAGACAGATCAA
CRSP8		NM_004269	9442	Co-activator	Seed	cofactor required for Sp1 transcriptional activation, subunit 8, 34kD	CATTGAAGCGTTCCGCTAATCAGATGGGAGTATCTGCCAAACGTAGACCA
CRSP9		NM_004270	9443	Co-activator	Seed	cofactor required for Sp1 transcriptional activation, subunit 9, 33kD	GAAAGATGCTGCCTTGTGTGTCCTAATTGATGAGATGAATGAAAGACCAT
CRX		NM_000554	1406	Homeobox	Seed	cone-rod homeobox	GGAAATTCACCTACAATCCCATGGACCCTCTGGACTACAAGGATCAGAGT
CSDA		NM_003651	8531	Beta-scaffold-cold-shock	Seed	cold shock domain protein A	ATAAAGAAAATCAGCAAGCCACCAGTGGTCCAAACCAGCCGTCTGTTCGC
CSEN		NM_013434	30818	Other	Seed	Calsenilin, presenilin-binding protein, EF hand transcription factor	TTTAAGAATGAGTGTCCCACGGGCCTGGTGGACGAAGACACCTTCAAACT
CSRP1		NM_004078	1465	Co-activator	Seed	cysteine and glycine-rich protein 1	GATGGCGAGATTTACTGCAAAGGATGTTATGCTAAAAACTTCGGGCCCAA
CSRP2		NM_001321	1466	Co-activator	Seed	cysteine and glycine-rich protein 2	TGCAAATCCTGCTACGGAAAGAAGTATGGGCCAAAAGGCTACGGTTATGG
CSRP3		NM_003476	8048	Co-activator	Seed	cysteine and glycine-rich protein 3 (cardiac LIM protein)	TATTGCAAAGTTTGCTATGCCAAAAATTTTGGCCCCACGGGTATTGGGTT
CTCF		NM_006565	10664	ZnF-C2H2	Seed	CCCTC-binding factor (zinc finger protein)	ACATTTACACGTCGGAATACCATGGCAAGACATGCTGATAATTGTGCTGG
CTCFL	NT_011362:1953	NM_080618	140690	ZnF-C2H2	Found	CCCTC-binding factor (zinc finger protein)-like	CTTTTCCCGCTGGATTAACCTGCACAGACATTCGGAGAAGTGTGGATCAGG
CTNNB1		NM_001904	1499	Co-activator	Seed	catenin (cadherin-associated protein), beta 1, 88kD	GGAGAACCCCTTGGATATCGCCAGGATGATCCTAGCTATCGTTCTTTTCA
CUTL1		NM_001913	1523	Homeobox	Seed	cut (Drosophila)-like 1 (CCAAT displacement protein)	TTCTTCTACACACTGTTCCTGCACTGCCTGGTCTTCCTGGTGCTCTACAA
CUTL2		AB006631	23316	Homeobox	Seed	cut-like 2 (Drosophila)	GATGGCCAATCTGAACAACATCATTTACCGACTAGAGCGGGCTGCCAATC
CXorf6		NM_005491	10046	Other	Seed	chromosome X open reading frame 6	CTGGAGACGTGTCACCGTCTAACATTACTCATGTAGACAAAGCCTGCAAG
DACH		NM_004392	1602	Co-repressor	Seed	dachshund (Drosophila) homolog	GATTTGGCCGGTCATGACATGGGACATGAGTCAAAAAGGATGCATATTGA
DAT1		NM_018640	55885	ZnF-Other	Seed	neuronal specific transcription factor DAT1	CCTAAAGAATAACATGATCCTTTGCCAGACGGACTACGAGGAAGGTTTAA
DATF1		NM_022105	11083	ZnF-PHD	Seed	death associated transcription factor 1	CGCCGTCACTGTTGTATAAATGTATGTATCACCTAGGGGTTGGCCTCCTG
DBP		NM_001352	1628	bZIP	Seed	D site of albumin promoter (albumin D-box) binding protein	CCACGAGACCTTTGACCCTCGAAGACATCGCTTCTCAGAAGAGGAACTTA
DDIT3		NM_004083	1649	bZIP	Seed	DNA-damage-inducible transcript 3	AAAGTGGCACAGCTAGCTGAAGAGAATGAACGGCTCAAGCAGGAAATCGA
DEAF1		NM_021008	10522	ZnF-MYND	Seed	deformed epidermal autoregulatory factor 1 (Drosophila)	AAGCTGCGTTGCCAACGTCACATCCCAAAATAGTGTTGACATCCCTGCCT
DKFZP434B0335		AB037779	25851	Other	Seed	DKFZP434B0335 protein	GGATTGAGATGGTTGGTGAGATGACGATGGTGAACGTGGGAATGAACGAC
DKFZP434B195		NM_031284	83440	Other	Seed	hypothetical protein DKFZp434B195	GCCATTTCAGCCGAAGGACTCTTCTATTCGGAAGTACACCCTCACTATTA
DKFZp434G043		AL080134		bHLH	Seed	HLHmdelta (fly) homolog	GGGCCTGGAGTTGGAGCTCAACAGCAATGGATTTCAGAGACCACCCTGAA
DKFZP434P1750		NM_015527	26000	Other	Seed	DKFZP434P1750 protein	CAATAGCACCCCCTTGGGTTCCAGCAAGGAGACCCGGAAGCAGGAGAAGG
DKFZp547B0714	NT_011233:43	NM_152606	163255	ZnF-C2H2	Found	hypothetical protein DKFZp547B0714	GCTGTGACTCACACTTGGTTCAACATGGGAAAATAGATTCTGATGTGAAACATGA
DKFZp564D0472		AL110179		Other	Seed	hypothetical protein	CACCTATAAGTATGAGAAAGGTTTCCATGTCTCCTACCCCTCACTGCACT
DKFZp686B0797	NT_011192:144	NM_198539	374900	ZnF-C2H2	Found	hypothetical protein DKFZp686B0797	CAGGTCAAGAAGCAACAGGAAACACTTGTGAGGAAAGTCACATCCATCTCCAA
DKFZp686B2197	NT_011104:32b	NM_194319	147974	ZnF-C2H2	Found	hypothetical protein DKFZp686B2197	CAATGCGGGAAGTCCTTTAGCTGCAGCTCTCACCTTACTCGACACTGTAGAATGT
DKFZp761B128	NT_033248:41	NM_152437	144348	ZnF-C2H2	Found	hypothetical protein DKFZp761B128
DKFZp761B128	NT_035239:20	NM_152437	144348	ZnF-C2H2	Found	hypothetical protein DKFZp761B128
DKFZp762I137	NT_007914:754	NM_152411	136051	ZnF-C2H2	Found	hypothetical protein DKFZp762I137	ACAACCATTTAGTAATGCACCAGAGAGGCCACTCAAAGGACCGGACACGT
DLX1		XM_087198	1745	Homeobox	Seed	distal-less homeobox 1	AGGACGATTTATTCCAGTTTGCAGTTGCAGGCTTTGAACCGGAGGTTCCA
DLX2		NM_004405	1746	Homeobox	Seed	distal-less homeobox 2	TGAGCCTGAAATTCGGATAGTGAACGGGAAGCCAAAGAAAGTCCGGAAAC
DLX3		NM_005220	1747	Homeobox	Seed	distal-less homeobox 3	AGCACAGTCCCAATAACAGTGATTCCATGGCCTGCAACTCACCACCATCA
DLX4		NM_001934	1748	Homeobox	Seed	distal-less homeobox 4	TATGGCAACAGCTTTGGACCCTGGTATCAGCATCACTCCTCAGATGTCCT
DLX5		NM_005221	1749	Homeobox	Seed	distal-less homeobox 5	AGAAAGTTCGTAAACCCAGGACTATTTATTCCAGCTTTCAGCTGGCCGCA
DLX6		NM_005222	1750	Homeobox	Seed	distal-less homeobox 6	AGCTCCAGGCTTTAAACCATCGCTTTCAGCAGACACAGTATCTGGCCCTT
DMRT1		NM_021951	1761	ZnF-DM	Seed	doublesex and mab-3 related transcription factor 1	GCCGTCTCTGTTTCCTTATTACAACAATCTATACAACTGCCCGCAGTACT
DMRT2		NM_006557	10655	ZnF-DM	Seed	doublesex and mab-3 related transcription factor 2	CTCCTTGGATTATTCTACAGCTATTATGTGTACATAATGAACCATCTTTA
DMRT3	NT_008413:158	NM_021240	58524	ZnF-DM	Found	doublesex and mab-3 related transcription factor 3	AGAGCGAACTTCCGCAGAACCTGAGAGTCTAGCGTTGCCCTCCAATGGGCA
DMRTA1	NT_023974:296	AJ290954	63951	ZnF-DM	Found	DMRT-like family A1	AAAGACTTGACTGCGACCAAGGCAAGCCTTCCGACAGTGTCCTCAAGACC
DMRTA2		AJ301580	63950	ZnF-DM	Seed	DMRT-like family A2	TAAGGTGGTTTTTGGGTTTTGTTTAGGAGGGTGGGTGGGGAAGGCTGAGC
DMRTB1	NT_004424:223	NM_033067	63948	ZnF-DM	Found	DMRT-like family B with proline-rich C-terminal, 1	CCTGCGCAGGCCGATGCGGACCGTGCCCGGCCCACTGTTCACCGACTTTGT
DMRTC1		BC029799	63947	ZnF-DM	Seed	DMRT-like family C1	TGTGATTGCTGACATACCTGTGCACTCATGTGTATACCCCTGCATGTGGA
DMRTC2	NT_011139:240	NM_033052	63946	ZnF-DM	Found	DMRT-like family C2	CTGAGGAACACTTAGAGGGTGGGCAGAAGCGGGGGTTCCCAGTCTGCTTGT
DMTF1		NM_021145	9988	Other	Seed	cyclin D binding Myb-like transcription factor 1	ATGTTATAGATACTGAATCTGTCTTGCCTTTGACAACACTAACAGATCCC
DR1		NM_001938	1810	Co-repressor	Seed	down-regulator of transcription 1, TBP-binding (negative cofactor 2)	CAGAGCATGTCATACAAGCACTAGAAAGTTTGGGATTTGGCTCTTACATC
DRAP1		NM_006442	10589	Co-repressor	Seed	DR1-associated protein 1 (negative cofactor 2 alpha)	ATGAATCTGAGGACACAGATACTGATGGGGAAGAGGAGACATCACAACCC
DRIL1		NM_005224	1820	Structural	Seed	dead ringer (Drosophila)-like 1	AGCATCAGCATGTCGGTGGAGATCAACGGCATCATGTACACAGGAGTTCT
DRIL2		NM_006465	10620	Structural	Seed	dead ringer (Drosophila)-like 2 (bright and dead ringer)	TGTCTTTCTCAGGGGTTTGGTCACAAAGGATGGACTCTTCCCACCCAGAG
DRPLA		NM_001940	1822	Co-repressor	Seed	dentatorubral-pallidoluysian atrophy (atrophin-1)	AGGCTAGCTTTGAACCCCATCCTTCTGTGACACCCACTGGATATCATGCT
DSIPI		NM_004089	1831	bZIP	Seed	delta sleep inducing peptide, immunoreactor	ATGGATCTGGTGAAGAATCATCTGATGTATGCTGTGAGAGAGGAGGTGGA
DTX2		AB040961	57652	ZnF-Other	Seed	deltex homolog 2 (Drosophila)	CTCAGTTAAGAGATTGAGGAAAATGTCCGTGAAAGAAGCGACCCCGAAGC
DUX1		NM_012146	26584	Homeobox	Seed	double homeobox 1	CCAGGGTCCAGATTTGGTTTCAGAATGAGAGATCATGCCAGTTGAGGCAG
DUX2		NM_012147	26583	Homeobox	Seed	double homeobox 2	AGATTCTGTTTCAGAATGAGAGGTCATGCCAGCTGAGGCAGCACTGGCAT
DUX3		NM_012148	26582	Homeobox	Seed	double homeobox genes 3	CCAGGGTCCAGATTTGGTTTCAGAATGAGAGATCATGCCAGTTGAGGCAG
DUX4		NM_033178	22947	Homeobox	Seed	double homeobox, 4	AGGACGACGGAGGCGTGATTTTGGTTTCCGAGTGGCTTTGCCCTCCCGAA
DUX5		NM_012149	26581	Homeobox	Seed	double homeobox 5	CCAGGGTCCAGATTTGGTTTCAGAATGAGAGATCATGCCAGTTGAGGCAG
DXYS155E		NM_005088	8227	Other	Seed	DNA segment on chromosome X and Y (unique) 155 expressed sequence	TTCTTTTGATTCGACCAAACACCTGAGTGATGCCTCAATTAAGAAGCGGC
E2F1		NM_005225	1869	E2F	Seed	E2F transcription factor 1	GAACTTTCAGATCTCCCTTAAGAGCAAACAAGGCCCGATCGATGTTTTCC
E2F2		NM_004091	1870	E2F	Seed	E2F transcription factor 2	ATCAGCGATCTCTTCGACTCCTACGACCTTGGGGACCTGTTGATTAATTG
E2F3		NM_001949	1871	E2F	Seed	E2F transcription factor 3	GTTAGCTTATGTTACATATCAAGATATTCGAAAAATTAGTGGCCTTAAAG
E2F4		NM_001950	1874	E2F	Seed	E2F transcription factor 4, p107/p130-binding	CGGGAGACCACGATTATATCTACAACCTGGACGAGAGTGAAGGTGTCTGT
E2F5		NM_001951	1875	E2F	Seed	E2F transcription factor 5, p130-binding	GTGCTGCTTATAAATAAAGAGTCGAGTTCATCTAAGCCCGTGGTTTTTCC
E2F6		NM_001952	1876	E2F	Seed	E2F transcription factor 6	GACTCTATCACAGTGCACATAAGGAGCACCAACGGACCTATCGATGTCTA
E4F1		NM_004424	1877	ZnF-C2H2	Seed	E4F transcription factor 1	TGCACAGAGAAAATCCGCTTCAGTGTGAGCAAGGACGTGGTTGTCAGCAA
EBF		AF208502	1879	bHLH	Seed	early B-cell factor	CCAGGCAGATTCATTTATACAGCGCGCAACGAACCCACCATCGATTATGG
EBF2	NT_023666:195	NM_022659	64641	bHLH	Found	early B-cell factor 2	ACCGGCTCTCCTTATGGAATCATGTCATTAAGTCCCACCGTTGGGTCTTCCAG
EED		NM_003797	8726	Structural	Seed	embryonic ectoderm development	GACATACATAGGAATTATGTTGATTGTGTGCGATGGTTAGGCGATTTGAT
EGLN1	NT_004753:53	NM_022051	54583	ZnF-MYND	Found	egl nine homolog 1 (C. elegans)
EGLN2		NM_017555	54750	ZnF-MYND	Seed	egl nine homolog 2 (C. elegans)	CATCACCTGTATCTATTACCTGAATCAGAACTGGGACGTTAAGGTAGGGG
EGR1		NM_001964	1958	ZnF-C2H2	Seed	early growth response 1	ACAGGGCTTTCGGACATGACAGCAACCTTTTCTCCCAGGACAATTGAAAT
EGR2		NM_000399	1959	ZnF-C2H2	Seed	early growth response 2 (Krox-20 (Drosophila) homolog)	GGACCCAGGTCTCTTCCCAATGATCCCAGACTATCCTGGATTCTTTCCAT
EGR3		NM_004430	1960	ZnF-C2H2	Seed	early growth response 3	CCTACTACCCCTCTGGAGACCATCAAGGCATTCAAAGACAAGCAGATCCA
EGR4		NM_001965	1961	ZnF-C2H2	Seed	early growth response 4	GAGGCTCGTTTTCCCGTAATAGGGACCAAGATTGAGGACTTGCTGTCCAT
EHF		NM_012153	26298	Trp cluster-Ets	Seed	ets homologous factor	TTGTTGGACAGCAAAACTTTCTGCCGGGCTCAGATCTCCATGACAACCAC
EHZF	NT_011044:150	NM_015461	25925	ZnF-PHD	Found	early hematopoietic zinc finger	TTCTGTTCCGAAGTTGTCAACGACCTCAACACTCTTCAGGAACACATCCGATGTT
ELD/OSA1		NM_020732	57492	Structural	Seed	BRG1-binding protein ELD/OSA1	CTGCTGTCGGCGTTTGACCTTCCACGTGACAGTTCTTCACAATTCCTTTC
ELF1		M82882	1997	Trp cluster-Ets	Seed	E74-like factor 1 (ets domain transcription factor)	AGGTCCTTACTAGCAATGTTCAGACCATTTGCAATGGAACCGTCAGTGTG
ELF2		NM_006874	1998	Trp cluster-Ets	Seed	E74-like factor 2 (ets domain transcription factor)	TGTTTCAATAGCCCATGGTACACCTGTAATGAGACTATCAATGCCTACTC
ELF3		NM_004433	1999	Trp cluster-Ets	Seed	E74-like factor 3 (ets domain transcription factor, epithelial-specific )	AAAAAGAACAGCAACATGACCTACGAGAAGCTGAGCCGGGCCATGAGGTA
ELF4		NM_001421	2000	Trp cluster-Ets	Seed	E74-like factor 4 (ets domain transcription factor)	CATGTCAACCGCGGAAGTCTTACTCAATATGGAGTCTCCCAGCGATATCC
ELF5		NM_001422	2001	Trp cluster-Ets	Seed	E74-like factor 5 (ets domain transcription factor)	ACTACTATAAAACAGGAATTTTGGAGCGGGTTGACCGAAGGTTAGTGTAC
ELK1		NM_005229	2002	Trp cluster-Ets	Seed	ELK1, member of ETS oncogene family	CTTTGCCCCCAGAAGTGAAAGTAGAAGGGCCCAAGGAAGAGTTGGAAGTT
ELK3		NM_005230	2004	Trp cluster-Ets	Seed	ELK3, ETS-domain protein (SRF accessory protein 2)	TCCTCTTTAATGTTGCCAAACGCTGCCAGTATTTCATCCGCCTCACCCTT
ELK4		NM_021795	2005	Trp cluster-Ets	Seed	ELK4, ETS-domain protein (SRF accessory protein 1)	TTTCTGTTACTTAGGTTTGTCTTAGAAAGGTTATGTGTGACTGTCATGTG
EME2	NT_010552:331	AK074080	197342	ZnF-BTB/POZ	Found	essential meiotic endonuclease 1 homolog 2 (S. pombe)	AGGAGCTGAGTCGGCACGTGTGCGCCGTTACCAAGGCTCTCGCCCAGTAT
EMX1		X68879	2016	Homeobox	Seed	empty spiracles homolog 1 (Drosophila)	AAGGTGTGGTTCCAGAACCGGAGGACAAAGTACAAACGGCAGAAGCTGGA
EMX2		NM_004098	2018	Homeobox	Seed	empty spiracles homolog 2 (Drosophila)	AGAAAAAAGGGACGCACCATATTAACCGGTGGAGAATCGCCACCAAGCAG
EN1		NM_001426	2019	Homeobox	Seed	engrailed homolog 1	ACTTTTTCATCGACAACATCCTGAGGCCGGACTTCGGCTGCAAAAAGGAG
EN2		NM_001427	2020	Homeobox	Seed	engrailed homolog 2	AGGTCCCAGGTCTCGAAAACCAAAGAAGAAGAACCCGAACAAAGAGGACA
ENC1	NT_006713:275	NM_003633	8507	ZnF-BTB/POZ	Found	ectodermal-neural cortex (with BTB-like domain)	TCCGAGAAGGCGTTAGCAACGCCGCAGTAGTGAGTGCCAAACTTAAGTTATTTGC
ENO1		NM_001428	2023	Other	Seed	enolase 1	GCTGAAGACTGCTATTGGAAAGCCTGGCCTACACTGTAAAGGTGGTCATG
EOMES		NM_005442	8320	T-box	Seed	eomesodermin (Xenopus laevis) homolog	TAATGAAAATTCACCCTCCATAAAGTGTGGGGACATTAATGCTGAAGAGT
EP300		NM_001429	2033	Co-activator	Seed	E1A binding protein p300	CCGCAGCAGCGGATGCAGCATCACATGCAACAGATGCAACAAGGAAATAT
EP400		NM_015409	57634	Structural	Seed	E1A binding protein p400	AGGACGACAGCGACATCTACCTCGACTCGGTCATGTGTCTCATGTATGAA
EPAS1		NM_001430	2034	bHLH	Seed	endothelial PAS domain protein 1	TTGATGCCGGACAAGCCACTGAGCGCAAATGTACCCAATGATAAGTTCAC
EPLIN		NM_016357	51474	Other	Seed	epithelial protein lost in neoplasm beta	AATCTCCACAAGAACCCAAGTCTCTGAATTGGTCGAGTTTTGTAGACAAC
ERCC2		X52221	2068	Other	Seed	excision repair cross-complementing rodent repair deficiency, complementation group 2	TTCCAGATTCGTGAGAATGACTTTCTTACCTTCGATGCCATGCGCCACGC
ERCC3		NM_000122	2071	Other	Seed	excision repair cross-complementing rodent repair deficiency, complementation group 3	AGGAATATGCCATTCGACTGAACAAACCCTATATCTACGGACCTACGTCT
ERCC6		NM_000124	2074	Other	Seed	excision repair cross-complementing rodent repair deficiency, complementation group 6	GATGACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGA
ERF		NM_006494	2077	Trp cluster-Ets	Seed	Ets2 repressor factor	TATTACTATAACAAGCGCATTCTGCACAAGACCAAGGGGAAACGGTTCAC
ERG		NM_004449	2078	Trp cluster-Ets	Seed	v-ets avian erythroblastosis virus E26 oncogene related	AGCGTCCTCAGTTAGATCCTTATCAGATTCTTGGACCAACAAGTAGCCGC
ESR1		NM_000125	2099	NHR	Seed	estrogen receptor 1	TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTATTACATCACGGGGG
ESR2		NM_001437	2100	NHR	Seed	estrogen receptor 2	TTTGTCCAGCTACAAATCAGTGTACAATCGATAAAAACCGGCGCAAGAGC
ESRRA		NM_004451	2101	NHR	Seed	estrogen-related receptor alpha	TGGAGCGAGAGGAGTATGTTCTACTAAAGGCCTTGGCCCTTGCCAATTCA
ESRRB		NM_004452	2103	NHR	Seed	estrogen-related receptor beta	TCGCTTCCCTATGATGACAAGCTGGCATACGCGGAGGACTATATCATGGA
ESRRG		NM_001438	2104	NHR	Seed	estrogen-related receptor gamma	CTTGTCTATGCAGACGATTATATAATGGACGAAGACCAGTCCAAATTAGC
ESX1L	NT_011651:35	NM_153448	80712	Homeobox	Found	extraembryonic, spermatogenesis, homeobox 1-like	AAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGGGTC
ETR101		NM_004907	9592	Other	Seed	immediate early protein	AAGAGGCACAGCGCATCATGACCCTGTCGGTGTGGAAGATGTATCACTCC
ETS1		NM_005238	2113	Trp cluster-Ets	Seed	v-ets avian erythroblastosis virus E26 oncogene homolog 1	CCAGGACTCTTTTGAAAGCATAGAGAGCTACGATAGTTGTGATCGCCTCA
ETS2		NM_005239	2114	Trp cluster-Ets	Seed	v-ets avian erythroblastosis virus E26 oncogene homolog 2	AGTCAGGACTTCCCAGGCAGCAACTTGAATTTGCTCACCAACAATTCTGG
ETV1		NM_004956	2115	Trp cluster-Ets	Seed	ets variant gene 1	CAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTATGTTTGA
ETV2		AF000671	2116	Trp cluster-Ets	Seed	ets variant gene 2	AGTTTGGCTCGATGCCCCAAAACTAACCACCGAGGTCCCATTCAGCTGTG
ETV3		L16464	2117	Trp cluster-Ets	Seed	ets variant gene 3	CTAGCTCCCAACTGCTTCTGGCCAGGAGTCCAGTAATGGTACTGATAGAA
ETV4		NM_001986	2118	Trp cluster-Ets	Seed	ets variant gene 4 (E1A enhancer-binding protein, E1AF)	CCTGATTTCCATTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAGGAT
ETV5		NM_004454	2119	Trp cluster-Ets	Seed	ets variant gene 5 (ets-related molecule)	GACAAGCTGAGCCGCTCTCTCCGCTATTACTATGAAAAGGGCATCATGCA
ETV6		NM_001987	2120	Trp cluster-Ets	Seed	ets variant gene 6, TEL oncogene	GAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACTGTG
EVI1	NT_034563:55	NM_005241	2122	ZnF-C2H2	Found	ecotropic viral integration site 1	TGAAGAAACCAGTGCCCTGGAGATGAGTTGCAAGACATCCCCAGTGAGGTAT
EVX1		NM_001989	2128	Homeobox	Seed	eve, even-skipped homeo box homolog 1 (Drosophila)	CAACCCAGTAGCTCGGACACCGAGTCGGATTTCTATGAAGAAATCGAGGT
EVX2		M59983	2129	Homeobox	Seed	eve, even-skipped homeo box homolog 2 (Drosophila)	TTGGGCTTGGTCGGAGAGAAGTAGACCAAGCCATTCAGAGGTCCGGAAGG
EYA1		NM_000503	2138	Other	Seed	eyes absent (Drosophila) homolog 1	CTCGCTCATTCACTCCCGGACAAACTGTGTGAATATTTTAGTAACAACTA
EYA2		NM_005204	2139	Other	Seed	eyes absent (Drosophila) homolog 2	CCAGTAGATCAATTTAAGCCATCTGATGTGGAAATTCAGGCTTGCTTCCG
EYA3		NM_001990	2140	Other	Seed	eyes absent (Drosophila) homolog 3	CTCATCCAGTCCAGAAAGAATTGTGTGAATGTTCCGATCACTACCACCCA
EYA4		NM_004100	2070	Other	Seed	eyes absent (Drosophila) homolog 4	AATTATTAGCACTAGGAGTAACTGCATAAATGTCTTGGTAACGACAACTC
EZF-2		NM_018337	55311	ZnF-C2H2	Seed	endothelial zinc finger protein 2	ACAGGTGGAAAGGAGGACAGTGGGATGATTCCCTTAGGCACCGCCCCTGG
EZH1		NM_001991	2145	Structural	Seed	enhancer of zeste homolog 1	AAAGATAACTCTTCCACACAAGTGTACAACTACCAACCCTGCGACCACCC
EZH2		NM_004456	2146	Structural	Seed	enhancer of zeste homolog 2	CTGCTATGCAAAAGTTATGATGGTTAACGGTGATCACAGGATAGGTATTT
FALZ		NM_004459	2186	ZnF-PHD	Seed	fetal Alzheimer antigen	ACTGTCGTTACTACAATCCAAGTGACTCCCCATTTTACCAGTGTGCAGAA
FBI1		NM_015898	51341	ZnF-BTB/POZ	Seed	HIV-1 inducer of short transcripts binding protein; lymphoma related factor	TACGAGTGCAACATCTGCAAGGTCCGCTTCACCAGGCAGGACAAGCTGAA
FEM1A		AL359589	55527	Other	Seed	fem-1 homolog a (C.elegans)	TGGATAAGAACAAGATCCCTTACAAGGGCTTCATCCCGGAAGATCTGGAG
FEZL		NM_018008	55079	ZnF-C2H2	Seed	likely ortholog of mouse and zebrafish forebrain embryonic zinc finger-like	TTCACCTGCGAGGTGTGCGGCAAGGTGTTTAACGCTCACTATAATCTCAC
FHL1		NM_001449	2273	ZnF-Other	Seed	four and a half LIM domains 1	AGATCAAAACGTGGAGTACAAGGGGACCGTCTGGCACAAAGACTGCTTCA
FHL2		NM_001450	2274	ZnF-Other	Seed	four and a half LIM domains 2	TTTGAGGAACGGCAGTGGCATAACGACTGCTTTAACTGTAAGAAGTGCTC
FHL5		NM_020482	9457	Co-activator	Seed	four and a half LIM domains 5	CCCAGTAGGAGTCATGTACACGGTATAAGACTTGGAGGAAATGCAGGGAC
FHX		NM_018416	55810	Forkhead	Seed	FOXJ2 forkhead factor	GGTGCCAATGAGGAGATCCCTGATGACTTCGACTGGGACTTGATCACTTA
FKHL18		AF042831	2307	Forkhead	Seed	forkhead (Drosophila)-like 18	CCTGGCGCCCCCACAACTGAGCCAACCAAGCCTCCCTACAGCTACATCGC
FLI1		NM_002017	2313	Trp cluster-Ets	Seed	friend leukemia virus integration 1	ATCCGACCGAGTCGTCCATGTACAAGTACCCTTCTGACATCTCCTACATG
FLJ10211		NM_018028	55095	Other	Seed	hypothetical protein FLJ10211	AGCCATCAACAGTATTGGGAGCAATGCAAACACAGGTCTCCCCTGCCAAA
FLJ10251		NM_018039	55693	Jumonji	Seed	hypothetical protein FLJ10251	CAACTGCGCAGAGGCCATCAATTTTGCCACTCCGCGATGGATTGATTATG
FLJ10298		NM_018050	54682	Other	Seed	hypothetical protein FLJ10298	TGGGTAGAATCCTCTCGGAATCACTCCGCAGGAAACGTTACTCAAGACTG
FLJ10300	NT_028233:108	NM_018051	55112	ZnF-PHD	Found	hypothetical protein FLJ10300	GACTCAAGGCTGCATTACTCTGTGACGCTGAGCGATGGCTTCTGGACGTTCC
FLJ10697		NM_018181	55205	ZnF-C2H2	Seed	hypothetical protein FLJ10697	AGAAGCAACTTATGATGGACCATATCAAGTCTATGCATGGAACATTGAAA
FLJ10759		NM_018207	55223	ZnF-Other	Seed	hypothetical protein FLJ10759	TTCTACAATGCTGATGACATGTCCTGGCTCTACACCTTCCGCGAGAAGTT
FLJ10876	NT_034412:27	NM_018254	55758	Trp Cluster-Myb	Found	hypothetical protein FLJ10876	TCATTCTCAGCGTTCTAAGTGCCGTCCACCTAAGGGCATGTATTTAACCCAGGAA
FLJ10891		NM_018260	55762	ZnF-C2H2	Seed	hypothetical protein FLJ10891	TCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCA
FLJ11078	NT_011295:381	NM_018316	55295	ZnF-BTB/POZ	Found	hypothetical protein FLJ11078	CGCCCTACACCGACAGCGACCGCTCGGTCAGCAGCAAGGTCTACCAGCTG
FLJ11191		NM_018355	55786	ZnF-C2H2	Seed	hypothetical protein FLJ11191	GAAATCATGCATTAGGGAAAAACCTTACAGATATATTGAGTGCGACAAAG
FLJ11637	NT_011268:279	NM_024967	80032	ZnF-C2H2	Found	hypothetical protein FLJ11637	GGCGGGCTTTGCTCTTCCAAAAATGTAAGAACGCAGATTGGACAGAAGCC
FLJ11780		AK021842		ZnF-C2H2	Seed	hypothetical gene supported by AK021842	GTCCCCACAGGGCTCTGTGCATGTCCATCATAGCAGTGGTAGGCTGTCAC
FLJ12517		NM_023007	65094	Jumonji	Seed	hypothetical protein FLJ12517	CTCAGAGACTACATCACCTACTGGAAAGAGTACATACAGGCGGGCTACTC
FLJ12525		NM_031206	81887	Other	Seed	hypothetical protein FLJ12525	GAAATTTAGGTATTTACCTAAGGCCATTAAGGCGTGGAATAACCCGTCCC
FLJ12581		NM_024865	79923	Homeobox	Seed	hypothetical protein	TTGTCCCCAAAGCTTGCCTTGCTTTGAAGCATCCGACTGTAAAGAATCTT
FLJ12586	NT_011104:316	NM_024620	79673	ZnF-C2H2	Found	hypothetical protein FLJ12586	ATGGTTTCCATGCACCTGACTCAAATGTTAGTGGTCTGGATTGTGACCCCG
FLJ12587	NT_010343:96	NM_022480	64410	ZnF-BTB/POZ	Found	hypothetical protein FLJ12587	TTTGACTGTGAGACCAACCAGTGGACGCGGATTGGGGACATGACTGCCAAG
FLJ12606		NM_024804	79862	ZnF-C2H2	Seed	hypothetical protein FLJ12606	TGTAAGAAATGCGGTAAAGCCTACACTCGTTCCAGTCACCTTACTCGCCA
FLJ12644		NM_023074	65251	ZnF-C2H2	Seed	hypothetical protein FLJ12644	CCACAGCAAGTCACAGCTTAAGTCCTAGTGAACATGTGCAGGGGAAAAGC
FLJ12700	NT_007914:819	NM_024910	79970	ZnF-C2H2	Found	hypothetical protein FLJ12700
FLJ12895	NT_011104:309	NM_023926	65982	ZnF-C2H2	Found	hypothetical protein FLJ12895	TCCTCAATTCTTAGCGATGGAGTGTACGAGAGGCACATGGACCCTCTGCTG
FLJ12985	NT_035089:8	NM_024924	79986	ZnF-C2H2	Found	hypothetical protein FLJ12985
FLJ13479		NM_024706	79759	ZnF-C2H2	Seed	hypothetical protein FLJ13479	AGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCACAATGACGCTGCTG
FLJ13590		NM_024840	79898	Other	Seed	hypothetical protein FLJ13590	GTGACAAAGCATTCCGCTGGAAATCACAGCTCAATGCACATCAGAAAGCT
FLJ13659		NM_025189	80264	ZnF-C2H2	Seed	hypothetical protein FLJ13659	TGGGGCTGACAGGAATCTTCTGGTGTACTCTTTTTATGAAAAGGGGCCAT
FLJ14129		NM_030895	79943	ZnF-C2H2	Seed	hypothetical protein FLJ14129	TCACTTCTGAGAAAACTGGAGGACAGAGTGGCCTCGAGTCAGACGTCCCT
FLJ14260	NT_011104:288	NM_025027	80095	ZnF-C2H2	Found	hypothetical protein FLJ14260	AGCAGGCATGTCCTCAACGCACTTGTCCAGAATGGGTGAGAAATCTTGAA
FLJ14297	NT_006111:70	NM_024903	79963	ZnF-C2H2	Found	hypothetical protein FLJ14297
FLJ14299	NT_008251:102	NM_025069	80139	ZnF-C2H2	Found	hypothetical protein FLJ14299	GGCCTGGGCCTGCCGCCGGGCAAGCCCCCCAGCTCCAGCCCGCTCACCGG
FLJ14345	NT_011148:5	NM_024733	79788	ZnF-C2H2	Found	hypothetical protein FLJ14345	CGTTCTACACGGTGAAGTTGGAGAGACTTGAAAGCTGTGACACTGCAGGCTTGTC
FLJ14486	NT_011104:397	NM_023792	84878	ZnF-BTB/POZ	Found	hypothetical protein FLJ14486	CAAACATTCCCGTGGTTTGGTATGGATATCGGTGGAACCCTGGTTAAGCTGGTT
FLJ14549		NM_032805	84891	ZnF-C2H2	Seed	hypothetical protein FLJ14549	CTGGCGAAGATGGGTCCCTTCTTGGCAGCAGTGAAATTTTGGAGGTCAAA
FLJ14768	NT_011150:23	NM_032836	84922	ZnF-C2H2	Found	hypothetical protein FLJ14768	GAGCCCTCGGAAGACACCCTGTACCAGTGCGACTGCGGGACCTTCTTTGC
FLJ14779	NT_011192:53	NM_032838	84924	ZnF-C2H2	Found	hypothetical protein FLJ14779	TCTGCCCACTTTGAGTCACCATCCATCCTTCACATTACAGCAAATCATTAACAGT
FLJ20043		NM_017637	54796	ZnF-C2H2	Seed	hypothetical protein FLJ20043	CCAGCTCTCACCAGATGGCCTACGTGTTTGAACTGCCATAGTCAGTGTGC
FLJ20079	NT_011176:136	NM_017656	54811	ZnF-C2H2	Found	hypothetical protein FLJ20079
FLJ20244		NM_017722	55621	ZnF-C3H	Seed	hypothetical protein FLJ20244	AGTGCCAACGAGGTCTTTTATAACCCGGTGCAGGAATTCAATCGGGACCT
FLJ20321		NM_017766	54897	ZnF-C2H2	Seed	hypothetical protein	AAGCACGCAAACTTCCACTTCCGGACAGAGGGAGAAGCAGCAAAAGGAAA
FLJ20344	NT_011568:72	NM_017776	55634	ZnF-C2H2	Found	hypothetical protein FLJ20344	ACCCCGGTACGGACCTGTGCAGAAGTCTGGCAAGTTGATGAGCAGATAGAT
FLJ20531		NM_017865	55657	ZnF-C2H2	Seed	hypothetical protein FLJ20531	AGACGTATCCACACTGGAGAAAAACCCCTGCAGTGTGAGATATGCGGGTT
FLJ20557		BC000130	55659	ZnF-C2H2	Seed	hypothetical protein FLJ20557	ACATGTGTGTCCCATTCCTGACCGACATTTTGCACCTGACCGATTTGCCT
FLJ20573		AK000580	57232	ZnF-C2H2	Seed	hypothetical zinc finger protein FLJ20573	GAGAAACCCTCCAGATGCAGTGACTGTGGGAAGGCATTCTGCCAGCATGT
FLJ20582	NT_010344:26	AK000589	54989	ZnF-C2H2	Found	hypothetical protein FLJ20582
FLJ20626	NT_011104:387	NM_017908	55663	ZnF-C2H2	Found	hypothetical protein FLJ20626	CGCGGCTTCGACTGGAAGTCAGTGTTCGTCATCCACCACCGGACACACAC
FLJ20729		NM_017953	54680	Other	Seed	hypothetical protein FLJ20729	AAAATTTAGTAAGATATTATGAACTAGATCCTTATAAAAGTCTCCTAGAC
FLJ21603		NM_024762	79818	Other	Seed	hypothetical protein FLJ21603	TTTAGCACCAAAGATATACTCAGTCAGCACGAGAGACTGCTCCCTACAGA
FLJ21628	NT_006802:2	NM_030613	80108	ZnF-C2H2	Found	hypothetical protein FLJ21628	GGTGTGTGGAAAACATTTCACTGGACGATCATCCCTTACCGTGCATCAGGT
FLJ21941	NT_011109:1285	NM_025040	80110	ZnF-C2H2	Found	FLJ21941 protein
FLJ22059	NT_011139:287	NM_022752	64763	ZnF-C2H2	Found	hypothetical protein FLJ22059	GACCAGCACCTTGGAGACCATAGCAGCGAGTCACACTTCCTGTGTGTAGACTGT
FLJ22301		NM_024836	79894	Other	Seed	hypothetical protein FLJ22301	CAATCTCAACGTGCATCGGCGCAACCATGCCGGCCACAAGCCACACAAAT
FLJ22332		NM_024724	79779	Other	Seed	hypothetical protein FLJ22332	CAATGACCAAAAGGATAACATACAAACCGGTGTGGAAAATGTTGTCCTTT
FLJ22487		AK026140		Other	Seed	hypothetical protein	ATCCAGGACTAACCAGCGGGTGAGCTTCAAGGAACAAAGGGCTTCCGCTG
FLJ23233	NT_011104:168	NM_024691	79744	ZnF-C2H2	Found	hypothetical protein FLJ23233	GCTCAGGTTCCTGTGGCTGCAGACTTGCTTACAGACCATGAGGAGGGCTAT
FLJ23309		NM_024896	79956	Other	Seed	hypothetical protein FLJ23309	TCTCACATAACCCCTCACATTCCTGCGATCAATGATAGTATCCGAGCTCA
FLJ23436	NT_024802:22	NM_024671	79724	ZnF-C2H2	Found	hypothetical protein FLJ23436	GCGGAGATGCTTCTGAACCCCGACGAAAAGAGTCCTTTGAATATCTCCGTAGGA
FLJ23506	NT_011104:233	NM_024833	79891	ZnF-C2H2	Found	hypothetical protein FLJ23506	TAGTAGGAGTGTCAGAGGTCAGGACTCTCATGGCAGAGCTGGAGTCTCACCCATG
FLJ23614	NT_011786:397	NM_152695	203523	ZnF-C2H2	Found	hypothetical protein FLJ23614	AAGCTTCAGACAGAGAGCCGGCCTTATTATGCACCAGGTCACTCACTTTAGAGGA
FLJ23765	NT_011192:175	NM_152655	199704	ZnF-C2H2	Found	hypothetical protein FLJ23765
FLJ25169	NT_008176:75	NM_152568	157848	Homeobox	Found	hypothetical protein FLJ25169	GCGAGAGCTGGGGGGAAGAAGCAGACACTCCTGCATGTCTTTCTGCTTCT
FLJ30663	NT_011196:508	AK055225	148103	ZnF-AN1	Found	hypothetical protein FLJ30663	GCACAGAGATCCTCAAGAGATTCCAGGTTGGGGCAAGCTAGAGATGAGGAAAAGC
FLJ30726	NT_033299:98	NM_153018	124961	ZnF-C2H2	Found	hypothetical protein FLJ30726	CACATCAGGGAGATACAACAGAGGGAGTTAGTGCATTTGCTACCTCTGGCCAAAA
FLJ30921	NT_011233:69	NM_152360	126231	ZnF-C2H2	Found	hypothetical protein FLJ30921	GTTATCAGCTGACTGTGCATCAGAGATTTCATACTGGTGAGAAAACCTATGA
FLJ30927	NT_011104:57	NM_144690	147948	ZnF-C2H2	Found	hypothetical protein FLJ30927	CAGACAACAGGGAAATCCAGACAGACATTTCCATCAGATGATCATCAGACATGAA
FLJ30932	NT_011176:40	NM_144693	148156	ZnF-C2H2	Found	hypothetical protein FLJ30932	ACCAAGCACCTGTCCAGATTTGGAGACTCTACTTAAAGCCAAATGGTTAACTCCT
FLJ31030	NT_011104:61	NM_152478	147949	ZnF-C2H2	Found	hypothetical protein FLJ31030	TCCCAGTTTGAGAGAAGACTGTCAAAGTGAGGACTGGTATAAGAACCAGCTGGGA
FLJ31100	NT_011104:156	NM_173631	284306	ZnF-C2H2	Found	hypothetical protein FLJ31100
FLJ31295	NT_009526:16	NM_152320	121274	ZnF-C2H2	Found	hypothetical protein FLJ31295	AGTTTCTCAAACCTGCTGTGTAGCACAGAGATGGATTCCCTGTTAAGACCCCACA
FLJ31413	NT_007914:812	NM_152557	155061	ZnF-C2H2	Found	hypothetical protein FLJ31413	AAGGCCATTCAACGAACCCTGTAAATACCCTGGCCGGACCAAAGGCTTTG
FLJ31751	NT_024802:5	NM_152652	197407	ZnF-C2H2	Found	hypothetical protein FLJ31751	CAGGACAAGCCATATATCTGCACTGATTGCGGCAAGAGGTTTGTGCTCAG
FLJ31875	NT_010542:14	NM_182531	197320	ZnF-AN1	Found	hypothetical protein FLJ31875
FLJ31986	NT_011176:116	NM_152476	147741	ZnF-C2H2	Found	hypothetical protein FLJ31986	ACGCATGTGGAAATTCCTTTCGAAATTCCATGTGCTTTCATGATCGCTTAAAAAC
FLJ32053	NT_011233:12	NM_152484	148266	ZnF-C2H2	Found	FLJ32053 protein	GACACTGGCAAGGAGAAATATGGGGAGTTGATGAGCATCAGAAAAACCAGGA
FLJ32130	NT_024802:32b	NM_152458	146540	ZnF-C2H2	Found	hypothetical protein FLJ32130	TTCGGCCACCTGGGCGCGCTGGGATTTTCAGTTCCCAAACCCGCTTTTAT
FLJ32191	NT_011192:164	NM_144689	147923	ZnF-C2H2	Found	hypothetical protein FLJ32191	TCTTGAAGAGTCCAATTCCAGGGATTATTTGGAAGCCAAAGGCAAGATGGAGAA
FLJ32932	NT_011104:159	NM_152909	147694	ZnF-C2H2	Found	hypothetical protein FLJ32932
FLJ33071	NT_010552:617	NM_152457	146434	ZnF-C2H2	Found	hypothetical protein FLJ33071	AGTCCTTATATCCTGCCCTTTCCGAGAAGAGCCACGACGAGGACTCTGAAC
FLJ34231		NM_152283	92379	ZnF-C2H2	Seed	hypothetical protein FLJ34231	TAGTGGCACATCCCAGAAGAGAACCTATGAGGGAGGGAATGCCCTGGATG
FLJ34817	NT_011268:270	NM_152303	115196	ZnF-C2H2	Found	hypothetical protein FLJ34817	AATGGGCAGTCATTGAACCACGGTATGGCCCTGACTATCCACAACAAAAT
FLJ34917	NT_011104:184	NM_153263	256051	ZnF-C2H2	Found	hypothetical protein FLJ34917	CAGACCACCCACAGCAGACAAGAGTATGCACATAGAAGCAGGGAGACCTTTC
FLJ35107	NT_005927:1136	NM_182629	348825	Homeobox	Found	hypothetical protein FLJ35107	GACACACGACAAGAGCTGGCGGAGATGCTCAATCTCAGGGAGTACCAAGT
FLJ35863	NT_011192:191	NM_152604	163087	ZnF-C2H2	Found	hypothetical protein FLJ35863	TGCCAGAGGGAGATAATGGGACTTACAAAGCATGGCCTTGAGTACTCCAGTTTTG
FLJ35867	NT_030828:610	NM_152455	146050	ZnF-C2H2	Found	hypothetical protein FLJ35867	CCAAACTCCCTTCTCATGCATCAGGTATCCCACCAGGTGGAAAATCCATA
FLJ35954	NT_006431:489	NM_152622	166968	Other	Found	hypothetical protein FLJ35954	GGATCGTTTAGTAGATGAAACAGAAGCTTTGGGTGGGACGGTAAATGCTTCAGCC
FLJ36040	NT_011109:1346	NM_173530	162963	ZnF-C2H2	Found	hypothetical protein FLJ36040	TGATCTTATTGATTTCCCATTACTCCCACAAGAAGAGAAAGCATACATTAGAGGA
FLJ36155		NM_147193	148979	ZnF-C2H2	Seed	likely ortholog of mouse Gli-similar 1 Kruppel-like zinc finger (Glis1)	ATGGAGCCTTTGACCACTGCCTGGGCCACATCCCCTCCATCTACACAGAC
FLJ36666	NT_011268:62	NM_152482	148223	bZIP	Found	hypothetical protein FLJ36666	GGAGAGCAGCTCTACCAGCAAAGCCGGGCCTACGTGGCTGCCAACCAGCG
FLJ37970	NT_033241:357	NM_032251	283234	bZIP	Found	hypothetical protein FLJ37970	GTGAGTGTGGGCCTGTGGTAGGCACTAGGGGGTGCCCCCGCCACCTGGCTA
FLJ39963	NT_033968:320	NM_182633	349075	ZnF-C2H2	Found	hypothetical protein FLJ39963	AATGGAGAGACTCGCAGGAGACAGCTTCTGGTACTCCATCCTAGGAGGACTCTG
FLJ40160	NT_032971:102	NM_173484	128209	ZnF-C2H2	Found	hypothetical protein FLJ40160
FLJ90396	NT_011176:577	NM_153358	163049	ZnF-C2H2	Found	hypothetical protein FLJ90396	AGTCAATGTGCAGAAAACTTCAGTCCCAATCTCAGTGTGACGAAGAAGACTGCC
FMR2		NM_002025	2334	AF-4	Seed	fragile X mental retardation 2	CACTAGCAATGTGTTACGGGGCTATGAACACTGGGATATGGCCGACAAAC
FOS		NM_005252	2353	bZIP	Seed	v-fos FBJ murine osteosarcoma viral oncogene homolog	AAGGAAAAACTAGAGTTCATCCTGGCAGCTCACCGACCTGCCTGCAAGAT
FOSB		NM_006732	2354	bZIP	Seed	FBJ murine osteosarcoma viral oncogene homolog B	AACCTGACGGCTTCTCTCTTTACACACAGTGAAGTTCAAGTCCTCGGCGA
FOSL1		NM_005438	8061	bZIP	Seed	FOS-like antigen 1	CGGAGACTGACAAACTGGAAGATGAGAAATCTGGGCTGCAGCGAGAGATG
FOSL2		NM_005253	2355	bZIP	Seed	FOS-like antigen 2	ATGTACCAGGATTATCCCGGGAACTTTGACACCTCGTCCCGGGGCAGCAG
FOXA1		NM_004496	3169	Forkhead	Seed	forkhead box A1	AGCAGCAGCATAAGCTGGACTTCAAGGCATACGAACAGGCACTGCAATAC
FOXA2		NM_021784	3170	Forkhead	Seed	forkhead box A2	ATGCTGGGAGCGGTGAAGATGGAAGGGCACGAGCCGTCCGACTGGAGCAG
FOXA3		NM_004497	3171	Forkhead	Seed	forkhead box A3	TGGAGTCTACTACCAGGGCCTCTATTCCCGCTCTTTGCTTAATGCATCCT
FOXB1		NM_012182	27023	Forkhead	Seed	forkhead box B1	ATGCCTCGGCCCGGCCGCAACACGTACAGCGACCAGAAGCCGCCCTACTC
FOXC1		NM_001453	2296	Forkhead	Seed	forkhead box C1	AGGATCGGCTTGAACAACTCTCCAGTGAACGGGAATAGTAGCTGTCAAAT
FOXC2		NM_005251	2303	Forkhead	Seed	forkhead box C2 (MFH-1, mesenchyme forkhead 1)	ATGCAGGCGCGCTACTCCGTGTCCGACCCCAACGCCCTGGGAGTGGTGCC
FOXD1		NM_004472	2297	Forkhead	Seed	forkhead box D1	CAAGGGACTGCCCTGTCCAGTGTCGAGAACTTTACTGCTAGGATTTCCAA
FOXD2		NM_004474	2306	Forkhead	Seed	forkhead box D2	GTCTACGCAGGCGGAGCTGAACGGAGAGGTGAAGCAGGGGGTCTTTATAT
FOXD3		NM_012183	27022	Forkhead	Seed	forkhead box D3	AGAAGAAGCTGACCCTGAGCGGCATCTGCGAGTTCATCAGCAACCGCTTC
FOXD4		AY344640	2298	Forkhead	Seed	forkhead box D4
FOXE1		NM_004473	2304	Forkhead	Seed	forkhead box E1 (thyroid transcription factor 2)	ACAAGTTCATCACCGAGCGCTTCCCCTTCTACCGCGACAACCCCAAAAAG
FOXE2		NM_012185	27021	Forkhead	Seed	forkhead box E2
FOXE3		NM_012186	2301	Forkhead	Seed	forkhead box E3	TCACGCTGGCCGCCATCTACCGCTTCATCACCGAACGCTTTGCCTTCTAC
FOXF1		NM_001451	2294	Forkhead	Seed	forkhead box F1	TCGCCCAGCATGTGTGACCGAAAGGAGTTTGTCTTCTCTTTCAACGCCAT
FOXF2		NM_001452	2295	Forkhead	Seed	forkhead box F2	CTAGCGGGTCGTATTATCACCATCACCACCAGAGCGTCTGTCAGGATATT
FOXG1B		NM_005249	2290	Forkhead	Seed	forkhead box G1B	TATTTCACACATCAAAATCAGGGGTCTTCTTCCAACCCTTTAATACATTA
FOXH1		NM_003923	8928	Forkhead	Seed	forkhead box H1	AAGACTACGAGGGCTGGAAAGACTCCATTCGCCACAACCTTTCCTCCAAC
FOXI1		NM_012188	2299	Forkhead	Seed	forkhead box I1	TACGGAGGATCTGTGCTCAGCCAATTCAGCCCTCACTTCTACAACAGTGT
FOXJ1		NM_001454	2302	Forkhead	Seed	forkhead box J1	AAGATCACCCTGTCGGCCATCTACAAGTGGATCACGGACAACTTCTGCTA
FOXL1		NM_005250	2300	Forkhead	Seed	forkhead box L1	CTCTCTTATTTCCCCCTGCAGGTTCCCGACACGGTACTCCACTTCCAGTA
FOXL2		NM_023067	668	Forkhead	Seed	forkhead box L2	AGAAGAATAAGAAGGGCTGGCAAAATAGCATCCGCCACAACCTCAGCCTC
FOXM1		NM_021953	2305	Forkhead	Seed	forkhead box M1	CCTTGAATCACCGCAAAGGCTCCTCAGTTCAGAACCCTTAGACCTCATCT
FOXN4	NT_009770:26	AF425596	121643	Forkhead	Found	forkhead/winged helix transcription factor FOXN4	ATGAACACTGAGGTGGATGCCCTCGACCCGAGCATCATGGACTTCGCTCT
FOXO1A		NM_002015	2308	Forkhead	Seed	forkhead box O1A (rhabdomyosarcoma)	TTCTGGGCCAGAACGTCATGATGGGCCCTAATTCGGTCATGTCAACCTAT
FOXO3A		NM_001455	2309	Forkhead	Seed	forkhead box O3A	TGTTGTTGGTTTGAACGTGGGGAACTTCACTGGTGCTAAGCAGGCCTCAT
FOXP1		AF275309	27086	Forkhead	Seed	forkhead box P1	GAGATCTATAACTGGTTCACACGAATGTTTGCTTACTTCCGACGCAACGC
FOXP2		NM_014491	93986	Forkhead	Seed	forkhead box P2	GCTCACCTCAGCCGCACATACATTCAATCCACGTCAAGGAAGAGCCAGTG
FOXP3		NM_014009	50943	Forkhead	Seed	forkhead box P3	CAACATGGACTACTTCAAGTTCCACAACATGCGACCCCCTTTCACCTACG
FOXP4	NT_007592:3277	NM_138457	116113	Forkhead	Found	forkhead box P4	TTTATCAAACACCTCAACACAGAGCACGCCCTGGATGACCGGAGTACAGC
FOXQ1		NM_033260	94234	Forkhead	Seed	forkhead box Q1	CGGGCCCGCGCGCGGACTTTGCACTTTGAATCCAGAGGAAGATGAATTTT
FREQ	NT_029366:864	NM_014286	23413	Other	Found	frequenin homolog (Drosophila)	TGACCAGGAAGACCTACTTTACCGAGAAGGAGGTCCAGCAGTGGTACAAAGGCT
FUBP1		NM_003902	8880	Other	Seed	far upstream element-binding protein	CAGCCTGGGCTGAGCATTATAGACAACAAGCAGCCTATTATGCCCAGACA
FUBP3	NT_008338:25	BC001325	8939	Other	Found	far upstream element (FUSE) binding protein 3	AGATAACATACACGGTGCCAGCCGATAAGTGTGGCCTCGTCATAGGCAAAGG
GABPA		NM_002040	2551	Trp cluster-Ets	Seed	GA-binding protein transcription factor, alpha subunit (60kD)	AAGCATTGTAGAACAAACCTACGCGCCAGCTGAATGTGTAAGCCAGGCCA
GABPB1		NM_005254	2552	Co-activator	Seed	GA-binding protein transcription factor, beta subunit 1 (53kD)	TCAGAAAATTCATCCAAGGCAACAGATGAAACGGGTGTATCTGCTGTTCA
GABPB2		NM_016655	2553	Trp cluster-Ets	Seed	GA-binding protein transcription factor, beta subunit 2 (47kD)	GCAGAAATAGAAGTAAGGAGTCTTTTACCCGGTGTGCTTTGCCGCAGTCA
GAS41		NM_006530	8089	Structural	Seed	glioma-amplified sequence-41	AAGGGTGTTACTATCGTTAAACCAATAGTTTACGGTAATGTTGCTCGGTA
GASC1		AB018323	23081	ZnF-PHD	Seed	gene amplified in squamous cell carcinoma 1	TTTTGTGGCACCTATCTATGGTGCAGATATTAATGGGAGCATATATGATG
GATA1		NM_002049	2623	ZnF-GATA	Seed	GATA-binding protein 1 (globin transcription factor 1)	ACCATGCGGAAGGATGGTATTCAGACTCGAAACCGCAAGGCATCTGGAAA
GATA2		NM_002050	2624	ZnF-GATA	Seed	GATA-binding protein 2	AAGAGCCGGCACCTGTTGTGCAAATTGTCAGACGACAACCACCACCTTAT
GATA3		NM_002051	2625	ZnF-GATA	Seed	GATA-binding protein 3	GCATCCAGACCAGAAACCGAAAAATGTCTAGCAAATCCAAAAAGTGCAAA
GATA4		NM_002052	2626	ZnF-GATA	Seed	GATA-binding protein 4	TCTTGCAATGCGGAAAGAGGGGATCCAAACCAGAAAACGGAAGCCCAAGA
GATA5		NM_080473	140628	ZnF-GATA	Seed	GATA-binding protein 5	CACCACCACCACCAACTTGAATTCCGTCATCAATGCTCACCGTCAATATG
GATA6		NM_005257	2627	ZnF-GATA	Seed	GATA-binding protein 6	AATCCCGAGAACAGCGAGCTCAAGTATTCGGGTCAAGATGGGCTCTACAT
GBX1		L11239	2636	Homeobox	Seed	gastrulation brain homeobox 1	GAGCCCGTAAGAAACCCCAAGATTGTTGTCCCCATACCTGTGCATGTCAA
GBX2		NM_001485	2637	Homeobox	Seed	gastrulation brain homeobox 2	CAGCTGCTGGAGCTAGAGAAGGAGTTCCACTGCAAAAAGTACCTCTCCTT
GCMA		NM_003643	8521	GCM	Seed	glial cells missing (Drosophila) homolog a	TGCCTCCGGAGTCTACTCTGATCATGGCGATCTACAAGCGTGGAGTAAAA
GCMB		NM_004752	9247	GCM	Seed	glial cells missing (Drosophila) homolog b	AGCCCATATCCCACCCTTTATAAGGATTCCACCAGTATCCCTAATGACAC
GCN5L1		NM_001487	2647	Other	Seed	GCN5 (general control of amino-acid synthesis, yeast, homolog)-like 1	ATCGAGCTGGACATGCGCACCATTGCCACTGCACTGGAATATGTCTACAA
GCN5L2		NM_021078	2648	Bromodomain	Seed	GCN5 (general control of amino-acid synthesis, yeast, homolog)-like 2	ATCAAGCACAACATTCTCTACTTCCTCACCTACGCCGACGAGTACGCCAT
GFI1		NM_005263	2672	ZnF-C2H2	Seed	growth factor independent 1	TACCCCTGTCAGTACTGTGGCAAGAGGTTCCACCAGAAGTCAGACATGAA
GFI1B		NM_004188	8328	ZnF-C2H2	Seed	growth factor independent 1B (potential regulator of CDKN1A, translocated in CML)	CAAGCGTTTCCACCAGAAGTCCGACATGAAGAAGCACACCTACATCCACA
GIOT-1		AB021641	92283	ZnF-C2H2	Seed	gonadotropin inducible transcription repressor 1	CTTATCAATGCGGGAAGGCGTTTAATCATAGATTACAACTTAACTTACAT
GIOT-2		NM_016264	51710	ZnF-C2H2	Seed	gonadotropin inducible transcription repressor-2	AGGACTCACAGTGAAGAAAAATCTTATGAGTGTCAAATTTGTGGGAAAGC
GLI		NM_005269	2735	ZnF-C2H2	Seed	glioma-associated oncogene homolog (zinc finger protein)	ATGAGTGTCTTACTGAGATCCCTACCTGGGGAAACAGAATTCCTCAACTC
GLI2		NM_005270	2736	ZnF-C2H2	Seed	GLI-Kruppel family member GLI2	CAAAAATAACATGCCTGTGCAGTGGAATGAGGCATCAGCAACATGGCTGT
GLI3		NM_000168	2737	ZnF-C2H2	Seed	GLI-Kruppel family member GLI3 (Greig cephalopolysyndactyly syndrome)	CTATCGGGGACATGAGTTCTTTGCTGACCTCCCTAGCGGAAGAAAGCAAA
GLI4	NT_023684:15	NM_138465	2738	ZnF-C2H2	Found	GLI-Kruppel family member GLI4	GGACATTCAGGAGTCCCCTTCTGTCCCGTCCCCTGTCAGTCTCTCATCAC
GLIS2		NM_032575	84662	ZnF-C2H2	Seed	Kruppel-like zinc finger protein GLIS2	TTTAAGCACACGCGCACCCACTATGTGGACAAGCCCTACTACTGCAAGAT
GREB1	NT_005334:553	NM_014668	9687	Co-repressor	Found	GREB1 protein	ATAACCTCTATTCTCAAAGTGACCCGTCGGTGGGATTGGTGGACCGATTGC
GRLF1		NM_004491	2909	ZnF-Other	Seed	glucocorticoid receptor DNA binding factor 1	AAAGAACATAATCGAGGCTACTCATATGTACGATAATGCTGCCGAGGCCT
GSC		ENST00000238558	2927	Homeobox	Seed	goosecoid	CGCACAGCGCGGCGGCTCCCGTCGTCTTCCCGGCCCTGCACGGGGACTCG
GSCL		NM_005315	2928	Homeobox	Seed	goosecoid-like	GGGTGCCGGGCGGCCCTGCCCCTTCTCCATCGAGCACATCCTCTCCAGCC
GSH1		XM_046853	92719	Homeobox	Seed	genomic screened homeo box 1 homolog (mouse)	GGGGCCCAGCTTCCAATAGTGTCAGAAGCAACTTGTGGCTTTGCCTTGGT
GSH2		NM_133267	170825	Homeobox	Seed	genomic screened homeo box 2 homolog (mouse)	CTCTTCCAACATGTACCTGTCTCGACTCCGGAGGATTGAAATCGCCACTT
GTF2A1		NM_015859	2957	Other	Seed	general transcription factor IIA, 1 (37kD and 19kD subunits)	ACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGA
GTF2A2		NM_004492	2958	Other	Seed	general transcription factor IIA, 2 (12kD subunit)	GGGCTCTCTAAATACGTACAGATTCTGCGATAATGTGTGGACTTTTGTAC
GTF2B		NM_001514	2959	Other	Seed	general transcription factor IIB	GCTGATGTTACAATCAGACAGTCCTATAGACTGATCTATCCTCGAGCCCC
GTF2E1		NM_005513	2960	Other	Seed	general transcription factor IIE, polypeptide 1 (alpha subunit, 56kD)	GGAAGCATATATAGCAATGGGACAACGCATGTTTGAGGACCTCTTTGAGT
GTF2E2		NM_002095	2961	Other	Seed	general transcription factor IIE, polypeptide 2 (beta subunit, 34kD)	TCACAGAAAAAGCGACGCTTTAAGACTCATAACGAACACTTGGCTGGAGT
GTF2F1		NM_002096	2962	Other	Seed	general transcription factor IIF, polypeptide 1 (74kD subunit)	AGATCCTCAAGCGACTCAACCCCGAGCGCAAGATGATCAACGACAAAATG
GTF2F2		NM_004128	2963	Other	Seed	general transcription factor IIF, polypeptide 2 (30kD subunit)	AAGACGGAAAGCGAGCTCGAGCTGATAAACAACATGTTTTAGACATGCTA
GTF2H1		NM_005316	2965	Other	Seed	general transcription factor IIH, polypeptide 1 (62kD subunit)	AAAGATTCGGAGACAGTATTTAAGCACAAATTTGGTAAGTCACATAGAAG
GTF2H2		NM_001515	2966	Other	Seed	general transcription factor IIH, polypeptide 2 (44kD subunit)	GTTCTGAATGCTCACTTATTCGTATGGGATTTCCTCAGCACACCATTGCT
GTF2H3		NM_001516	2967	Other	Seed	general transcription factor IIH, polypeptide 3 (34kD subunit)	AAGAGATTAAAGATCTAATGACCAAAAGTGACATAAAGGGTCAACATACA
GTF2H4		NM_001517	2968	Other	Seed	general transcription factor IIH, polypeptide 4 (52kD subunit)	GCCAGGTTTCATTGTCGTGGAAACCAATTACCGACTGTATGCCTACACGG
GTF2I		NM_001518	2969	Other	Seed	general transcription factor II, i	AAAGAGACTGATGGAAGCTCTCAGATCAAGCAAGAACCAGACCCCACGTG
GTF2IRD1	NT_007758:1220	NM_005685	9569	bHLH	Found	GTF2I repeat domain containing 1	CTGGTCCCTTATAAACTAATCCGGGACAGCCCAGACGCCGTGGAGGTCACGG
GTF2IRD2	NT_007758:1320	NM_173537	84163	bHLH	Found	transcription factor GTF2IRD2
GTF3A		NM_002097	2971	Other	Seed	general transcription factor IIIA	TGAAGCTCAAAGTCAAAAAATCTCGTGAAAAACGGGAGTTTGGCCTCTCA
GTF3C1		NM_001520	2975	Other	Seed	general transcription factor IIIC, polypeptide 1 (alpha subunit, 220kD )	GTCCTACCAGCTATCCCAGACCTACTACAGGATTTTTACGTGGCGATTTC
GTF3C2		NM_001521	2976	Other	Seed	general transcription factor IIIC, polypeptide 2 (beta subunit, 110kD)	CAGCTGGAGGCTATTCATAAGGTACGTTTCAGCCCAAACCTGGACTCCTA
GTF3C3		NM_012086	9330	Other	Seed	general transcription factor IIIC, polypeptide 3 (102kD)	AGGGTATAGAACTTGACCAGTTAGACTTACGAAGAGATATTGCCTACAAC
GTF3C4		NM_012204	9329	Other	Seed	general transcription factor IIIC, polypeptide 4 (90kD)	AGATGCACTTGACCAGGGAACACATGAAGCCAGTCTTAGGAGAAGTGTAT
GTF3C5		NM_012087	9328	Other	Seed	general transcription factor IIIC, polypeptide 5 (63kD)	GCTCAAGGTCTTGCTTCCCTTCATAGCCTATTACATGATAACAGGCCCCT
HAND1		NM_004821	9421	bHLH	Seed	heart and neural crest derivatives expressed 1	ACGAAGGTTTTCCTCCTGCCCTGGGCCCAGTCGAGAAGAGGATTAAAGGA
HAND2		NM_021973	9464	bHLH	Seed	basic helix-loop-helix transcription factor HAND2	GAGCTGAACGAAATCTTGAAAAGCACAGTGAGCAGCAACGACAAGAAAAC
HATH6	NT_015805:94	NM_032827	84913	bHLH	Found	basic helix-loop-helix transcription factor 6	CTACTCGTCAATTTCACACGTAATTTACAATAACCACCAGGATTCCTCCG
HBOA		NM_007067	11143	Co-activator	Seed	histone acetyltransferase	CCAGAACGTCCACTCTCAGATCTGGGGCTTATAAGCTATCGCAGTTACTG
HCF2		NM_013320	29915	Other	Seed	host cell factor 2	TGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTT
HCNGP		NM_013260	29115	Other	Seed	transcriptional regulator protein	AACAAAAATTGAGTTTGTGACGGGCACCAAAAAAGGCACCACGACCAACG
HDAC1		NM_004964	3065	Co-repressor	Seed	histone deacetylase 1	TTATGCTGTTAACTACCCGCTCCGAGACGGGATTGATGACGAGTCCTATG
HDAC2		NM_001527	3066	Co-repressor	Seed	histone deacetylase 2	CTGTCAATTTTCCAATGTGTGATGGTATAGATGATGAGTCATATGGGCAG
HDAC4		NM_006037	9759	Co-repressor	Seed	histone deacetylase 4	AAAAGGTTTTACAGCAAAGACCCAATGCAAACGCTGTCCGTTCCATGGAG
HDAC8	NT_011594:18	NM_018486	55869	Structural	Found	histone deacetylase 8	CTGGGAATATTACGATTGCGACGGAAATTTGAGCGTATTCTCTACGTGGATTTGG
HES2		NM_019089	54626	bHLH	Seed	hairy and enhancer of split 2 (Drosophila)	CTTCCCCTCCATGCTCAGAACTGCTTCCTACTCTACATCCAGGCTCCTGA
HES5		BQ924744	256482	bHLH	Seed	hairy and enhancer of split 5 (Drosophila)	CCGACATCCTGGAGATGGCTGTCAGCTACCTGAAGCACAGCAAAGGTGAG
HES6		NM_018645	55502	bHLH	Seed	hairy and enhancer of split 6 (Drosophila)	ATCGACGCTACCGTCGCTGCCGAGCTCCTGAACCATCTGCTCGAGTCCAT
HES7		NM_032580	84667	bHLH	Seed	hairy and enhancer of split 7 (Drosophila)	AACCCGAAGCTGGAGAAAGCGGAGATATTGGAGTTCGCCGTGGGCTACTT
HESX1		NM_003865	8820	Homeobox	Seed	homeobox (expressed in ES cells) 1	GTCTTTAGAGTAAACTGCTATCCTGGTATCGATATTAGAGAAGACTTAGC
HEY1		NM_012258	23462	bHLH	Seed	hairy/enhancer-of-split related with YRPW motif 1	GTTACTTTGACGCGCACGCCCTTGCTATGGACTATCGGAGTTTGGGATTT
HEY2		NM_012259	23493	bHLH	Seed	hairy/enhancer-of-split related with YRPW motif 2	AACAAACAATAAACCTTACCGACCCTGGGGGACAGAAGTTGGAGCTTTTT
HEYL		NM_014571	26508	bHLH	Seed	hairy/enhancer-of-split related with YRPW motif-like	CATGCTCTACCACTCCTGGGTCTCTGAAATCACTGAAATCGGGGCTTTCT
HHEX		NM_002729	3087	Homeobox	Seed	hematopoietically expressed homeobox	AGAATAAAGGTGCTTCTTTGGATAGCTCTCAATGTTCGCCCTCCCCTGCC
HIC1		NM_006497	3090	ZnF-BTB/POZ	Seed	hypermethylated in cancer 1	AAGTTCGCACAGCAACGCAACCTCATCAGCCACATGAAGATGCACGCCGT
HIC2		AB028943	23119	ZnF-BTB/POZ	Seed	hypermethylated in cancer 2	CGGCTTCAGTCACCCCACTTTAACTTTCTACCAGGACCCCCTCCCCCTAC
HIF1A		NM_001530	3091	bHLH	Seed	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	CAGCCAGACGATCATGCAGCTACTACATCACTTTCTTGGAAACGTGTAAA
HIF3A		NM_022462	64344	bHLH	Seed	hypoxia inducible factor 3, alpha subunit	AGGAAAAGGCCTCCCCCCTTCTTAGCCCCATTTACCCCGTTTGTGGAAGG
HIRA		NM_003325	7290	Other	Seed	HIR (histone cell cycle regulation defective, S. cerevisiae) homolog A	TCCTCGTCTACGCACGGTACCTCGTAAACGAAGGGTTTGAATACCGACTT
HIS1		NM_006460	10614	Other	Seed	HMBA-inducible	CAGAACATGAGCAAGCAGGAGCTCATCAAGGAGTACCTGGAACTGGAGAA
HIVEP1		NM_002114	3096	ZnF-C2H2	Seed	human immunodeficiency virus type I enhancer-binding protein 1	CCCTCGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAA
HIVEP2		NM_006734	3097	ZnF-C2H2	Seed	human immunodeficiency virus type I enhancer-binding protein 2	ACAGCAAGAAGAGACCTCTCCCCTAGAAGAGAGAGAAGATACATGACCAC
HIVEP3	NT_004852:421	NM_024503	59269	ZnF-C2H2	Found	human immunodeficiency virus type I enhancer binding protein 3	CCTCCGTGTCGCCTGTGGCTAAGGTCTCCAAATTCACACTCTCCTCAGAG
HKR1		BC004513	3102	ZnF-C2H2	Seed	GLI-Kruppel family member HKR1	GAAGACACAAACTGGGGAGACACCTTACATGTACACTGAGTGGGGAGACA
HKR2		M20676	3103	ZnF-C2H2	Seed	GLI-Kruppel family member HKR2	AAGGCCTTTGGACAGAGAAGTCACCTTGTTCAGCACACCAGTGAGAAGCT
HKR3		NM_005341	3104	ZnF-BTB/POZ	Seed	GLI-Kruppel family member HKR3	ATGCACATCAAGGCCAAGCACAGGAATGAGAGGCCACACGTATGTGAGTT
HLF		NM_002126	3131	bZIP	Seed	hepatic leukemia factor	TCAGCTGTTGCCAGCAAACCGCAATACACCAAGTCCCATTGATCCTGACA
HLX1		NM_021958	3142	Homeobox	Seed	H2.0 (Drosophila)-like homeo box 1	GAGCGGACTGAGGGGAGTGAGCGTTCTCTGCACCAAACAACAGTTATTAA
HLXB9		NM_005515	3110	Homeobox	Seed	homeo box HB9	AGATTTGGTTCCAGAACCGGCGGATGAAATGGAAACGCAGCAAAAAGGCC
HMG20A	NT_024654:319	NM_018200	10363	Structural	Found	high-mobility group 20A	AACATGGAGTTTGAGGAGAGGAATGCAGCCCTGCAAAAGCACGTGGAGAG
HMG20B		NM_006339	10362	Structural	Seed	high-mobility group 20B	TCCAGCCCCCCTAAAATTAAATTTCTGCAGCATCCCTTTAGCTTTCAATC
HMGA1		NM_002131	3159	Beta-scaffold-HMG	Seed	high mobility group AT-hook 1	CTCGGGGCCGACCAAAGGGAAGCAAAAACAAGGGTGCTGCCAAGACCCGG
HMGA2		NM_003483	8091	Beta-scaffold-HMG	Seed	high mobility group AT-hook 2	CAGGAGGAAACTGAAGAGACATCCTCACAAGAGTCTGCCGAAGAGGACTA
HMGB1		NM_002128	3146	Structural	Seed	high-mobility group box 1	GCCGAGAGGCAAAATGTCATCATATGCATTTTTTGTGCAAACTTGTCGGG
HMGB2		NM_002129	3148	Structural	Seed	high-mobility group box 2	GAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAAGCTCGCTATGACA
HMGB3	NT_011602:55	NM_005342	3149	Structural	Found	high-mobility group box 3
HMGN2		NM_005517	3151	Structural	Seed	high-mobility group nucleosomal binding domain 2
HMX1		NM_018942	3166	Homeobox	Seed	homeo box (H6 family) 1	GGCCGAAAGAAGAAGACGCGCACAGTCTTCTCCCGCAGCCAGGTCTTCCA
HMX2		ENST00000224868	3167	Homeobox	Seed	homeo box (H6 family) 2	AGATCATTCTGGAGGAGAGCGACTCCGAGGAAAGCAAAAAGGAAGGCGAA
HMX3		XM_114950		Homeobox	Seed	homeo box (H6 family) 3	TCCTCTCGCAGTGCGTTGCTAGGCTCCTCAAATTCAATCGACACAATTGA
HNF4A		NM_000457	3172	NHR	Seed	hepatocyte nuclear factor 4, alpha	CTGATGCAGGAACATATGGGAACCAACGTCATCGTTGCCAACACAATGCC
HNF4G		NM_004133	3174	NHR	Seed	hepatocyte nuclear factor 4, gamma	TTGTCTCAAGACCCATTAACTGGACAAACTATACTTTTAGGTCCCATGTC
HOP		NM_032495	84525	Homeobox	Seed	homeodomain-only protein	AGGACGCTAGGCTCTGCCGTCAGCCCGCAACAGCGCTCAGTCCAGGGAGG
HOXA1		NM_005522	3198	Homeobox	Seed	homeobox A1	AGTCAAAAGAAACCCTCCCAAAACAGGGAAAGTTGGAGAGTACGGCTACC
HOXA10		NM_018951	3206	Homeobox	Seed	homeobox A10	TATCTGCTCCCTTCGCCAAATTATCCCACAACAATGTCATCGTCGGAGAG
HOXA11		NM_005523	3207	Homeobox	Seed	homeobox A11	TGCTCCTCTAACATGTATTTGCCAAGTTGTACTTACTACGTCTCGGGTCC
HOXA13		NM_000522	3209	Homeobox	Seed	homeobox A13	ACTTGAACGGGAATACGCCACGAATAAATTCATTACTAAGGACAAACGGA
HOXA2		NM_006735	3199	Homeobox	Seed	homeobox A2	CCAGGTTCCCTCGACAGTCCCGTAGATATTTCAGCTGACAGCTTAGACTT
HOXA3		NM_030661	3200	Homeobox	Seed	homeobox A3	GCCGCATGAAGTACAAAAAGGATCAGAAGGGCAAGGGCATGCTAACGTCA
HOXA4		NM_002141	3201	Homeobox	Seed	homeobox A4	ATGAAGAAGATCCATGTCAGCGCCGTTAACCCCAGTTATAACGGAGGGGA
HOXA5		NM_019102	3202	Homeobox	Seed	homeobox A5	TCATTTTGCGGTCGCTATCCAAATGGCCCGGACTACCAGTTGCATAATTA
HOXA6		NM_024014	3203	Homeobox	Seed	homeobox A6	AACCGCCGCATGAAGTGGAAAAAGGAAAACAAGCTCATCAATTCCACGCA
HOXA7		NM_006896	3204	Homeobox	Seed	homeobox A7	GTTCTTCGTATTATGTGAACGCGCTTTTTAGCAAATATACGGCGGGGACT
HOXA9		NM_002142	3205	Homeobox	Seed	homeobox A9	CCGCCATTGGGCTACTGTAGATTTGTATCCTTGATGAATCTGGGGTTTCC
HOXB1		NM_002144	3211	Homeobox	Seed	homeobox B1	ATGGACTATAATAGGATGAACTCCTTCTTAGAGTACCCACTCTGTAACCG
HOXB13		NM_006361	10481	Homeobox	Seed	homeobox B13	GGAGTATGCGGCTAACAAGTTCATCACCAAGGACAAGAGGCGCAAGATCT
HOXB2		NM_002145	3212	Homeobox	Seed	homeobox B2	TTCTCTCGACAGCCCGGTCCCTTTTTCCGAGGAAGAGCTGGATTTTTTCA
HOXB3		NM_002146	3213	Homeobox	Seed	homeobox B3	CCTCACCAAACAGATATTCCCCTGGATGAAAGAGTCGAGGCAAACGTCCA
HOXB4		NM_024015	3214	Homeobox	Seed	homeobox B4	TGAAGTGGAAAAAAGACCACAAGTTGCCCAACACCAAGATCCGCTCGGGT
HOXB5		NM_002147	3215	Homeobox	Seed	homeobox B5	CCTTCTCGGGGCGTTATCCAAATGGCCCGGACTATCAGTTGCTAAATTAT
HOXB6		NM_018952	3216	Homeobox	Seed	homeobox B6	AGAAGTGCTCCACTCCGGTCTACCCGTGGATGCAGCGGATGAATTCGTGC
HOXB7		NM_004502	3217	Homeobox	Seed	homeobox B7	TTTCTAAATATCCAGCCTCAAGTTCGGTTTTCGCTACCGGAGCCTTCCCA
HOXB8		NM_024016	3218	Homeobox	Seed	homeobox B8	GGAGTTCCTATTTAATCCCTATCTGACTCGTAAGCGGCGAATCGAGGTAT
HOXB9		NM_024017	3219	Homeobox	Seed	homeobox B9	TTTCTGGGACGCTTAGCAGCTATTATGTCGACTCGATCATAAGTCACGAG
HOXC10		NM_017409	3226	Homeobox	Seed	homeobox C10	GTATTTGACGCGAGAGCGCCGCCTGGAGATTAGCAAGACCATTAACCTTA
HOXC11		NM_014212	3227	Homeobox	Seed	homeobox C11	AGCTGTCCCGGATGCTGAACCTGACGGACCGACAAGTGAAAATTTGGTTT
HOXC12		X99631	3228	Homeobox	Seed	homeoboxC12	GAGGGAACTCTCAGACCGCTTGAATCTTAGTGACCAGCAGGTCAAGATCT
HOXC13		NM_017410	3229	Homeobox	Seed	homeobox C13	AAAGAGAAGAAGGTGGTCAGCAAATCGAAAGCGCCTCATCTCCACTCCAC
HOXC4		NM_014620	3221	Homeobox	Seed	homeobox C4	TATTCGCAAAATAGCTACATCCCTGAACACAGTCCGGAATATTACGGCCG
HOXC5		NM_018953	3222	Homeobox	Seed	homeobox C5	CAATATCCCTGCCTATAACATGCAAACTTGTGGGAACTATGGATCGGCCT
HOXC6		NM_004503	3223	Homeobox	Seed	homeobox C6	AACACCTTAGGACATAACACACAGACCTCAATCGCTCAGGATTTTAGTTC
HOXC8		NM_022658	3224	Homeobox	Seed	homeobox C8	TCTTTAATCCTTATTTGACACGAAAACGTCGGATTGAAGTCTCTCATGCC
HOXC9		NM_006897	3225	Homeobox	Seed	homeobox C9	AGGGTTCAGTGTTGAGATATTGGTGTTTTAGAGTTAGTTCTACCCAGCGA
HOXD1		NM_024501	3231	Homeobox	Seed	homeobox D1	AAGTGAAGAGGAATGCCTCTAAGAAAGGTAAACTCGCCGAGTATGGGGCC
HOXD10		NM_002148	3236	Homeobox	Seed	homeobox D10	GCCTAGAGATCAGTAAGAGCGTTAACCTCACCGACAGGCAGGTCAAGATT
HOXD11		NM_021192	3237	Homeobox	Seed	homeobox D11	AAACTGAACAGAGACCGTCTGCAGTATTTCACTGGAAACCCCTTATTTTG
HOXD12		NM_021193	3238	Homeobox	Seed	homeobox D12	CAGAAACGCAAGGAATTGTCCAATAGGCTGAACCTCAGCGACCAGCAAGT
HOXD13		NM_000523	3239	Homeobox	Seed	homeobox D13	AAGAGTGAAGGACAAGAAAATTGTCTCCAAGCTCAAAGATACTGTCTCCT
HOXD3		NM_006898	3232	Homeobox	Seed	homeobox D3	ACCCAGGACTGTTTGGAGGCTATGGCTACAGCAAAACTACGGACACTTAC
HOXD4		NM_014621	3233	Homeobox	Seed	homeobox D4	GAATTTCATTTTAACAGGTATCTGACAAGGCGCCGTCGGATTGAAATCGC
HOXD8		NM_019558	3234	Homeobox	Seed	homeobox D8	TTTTTAACCCCTATCTGACCAGGAAAAGAAGAATCGAGGTTTCCCACGCC
HOXD9		NM_014213	3235	Homeobox	Seed	homeobox D9	GAGTTCGCCTCGTGTAGTTTTGCCCCCAGATCGGCCGTGTTCTCTGCCTC
HPCA	NT_004511:93	NM_002143	3208	Other	Found	hippocalcin	TTCAAGAAGATCTACGCCAACTTCTTTCCCTATGGTGACGCCTCCAAGTTTGCC
HPCAL1	NT_005334:412	NM_002149	3241	Other	Found	hippocalcin-like 1	ACAGACAAGATCTTCAGGCAGATGGACACCAACAATGACGGCAAACTGTCC
H-plk		NM_015852	51351	ZnF-C2H2	Seed	Krueppel-related zinc finger protein	CCCAGTGATCTCTCCGGCCTCCTGATTCCCACAACATATAAGCATTCCTT
HR		AF039196	3264	Jumonji	Seed	hairless	AAGGAATCAACACAGAAAACGCCCCCAACTCCACAACCTTCCTGCAATGG
HRIHFB2122		NM_007032	11078	Other	Seed	Tara-like protein (Drosophila)	AGTTCCTGCGAGCTAGAGGTGCTGCTTCGCGTAAAAGAAAACGAACTCCA
HRY		NM_005524	3280	bHLH	Seed	hairy (Drosophila)-homolog	AACACTGATTTTGGATGCTCTGAAGAAAGATAGCTCGCGGCATTCCAAGC
HS747E2A		NM_015370	25770	Other	Seed	hypothetical protein (RING domain)	AGGCCTGCAGGAGGCATCAGAGAGAGTAAAGAAAGTTCAAAGGAGAAAAA
HSA275986		NM_018403	55802	Other	Seed	transcription factor SMIF	TTCTGTATAGAAATGCAAGCTTGTCGATATATAGTATCTGGTTTTATGAC
HSAJ2425		NM_017532	55566	NHR	Seed	p65 protein	GTTCCCAGTTATGCTTCTCAAGATTAGCCATATTAGGCACATGGTTGGGG
HSF1		NM_005526	3297	Heat shock	Seed	Heat shock transcription factor 1	TGGACAAGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTG
HSF2		NM_004506	3298	Heat shock	Seed	Heat shock transcription factor 2	AAATCTAAATCCAAACCAGATAAGCAGCTTATCCAGTATACCGCCTTTCC
HSF2BP		NM_007031	11077	Co-activator	Seed	Heat shock transcription factor 2 binding protein	AGTGTACCAAACTCAAAGTGCTAATGCTGATGTCCCTATACAATGTAAGC
HSF4		NM_001538	3299	Heat shock	Seed	Heat shock transcription factor 4	ACTTCATCCAGTCGCCTTCTACTTACAGCCTCTCCCAGAGACAAATTTGG
HSFY		NM_033108	86614	Heat shock	Seed	Heat shock transcription factor, Y-linked	ATCAGTTGACCACTATTCATATGCACTCTCATAGTACCTACATGCAAGCA
HSGT1		NM_007265	11319	Other	Seed	suppressor of S. cerevisiae gcr2	TGAAACACGAATAATGACATCGGTCACATTCACTAAATGTCTATATGCAC
HSHPX5		X74862	55545	Other	Seed	HPX-5	GTTGCTCCAGAAACAGTACCTCTCCATTGCAGAGGGTGCGGACTTCTCCA
HSPC018		NM_014027	28961	Other	Seed	HSPC018 protein	CTGGATCCATGCTTTACTGTGTTTAATGGGGGTAACAGGGGTCCCTACAG
HSPC059	NT_011233:37	NM_016536	51276	ZnF-C2H2	Found	HSPC059 protein	TGCAAAGGCAACTTAGAGGGTCAAGAAGCAAGTCAGGAAGGGCTTTACATGTGTG
HSPC063	NT_033899:972	NM_014155	29068	ZnF-C2H2	Found	HSPC063 protein	GGATTCAGCCTGAGAAAGTTAAGCACGCAGAAAATACCCGGACTTTAGAATTACC
HSPC189		NM_016535	51545	Other	Seed	HSPC189 protein	CTTTATGGAGCAGAACACACTGCAGAAACACACGCGGTGGAAGCATCCAT
HSPX153		X76978	54729	Homeobox	Seed	HPX-153 homeobox	AGCAGCTCGTGGCGCTGGAGAACAAGTTCAAGGCCACGCGCTACCTGTCG
HSRNAFEV	NT_005403:123	NM_017521	54738	Trp Cluster-Ets	Found	FEV protein	ACCTTTTTTCTTCTAGGTCTCCAGGTCCCGGAGGGGATTTGTGGACCTCTC
HSU79252		NM_013298	29787	Other	Seed	hypothetical protein	TTTGGAATCAGTCACCAGTCTTTCTGTACTGTCTTGGTTAGCTCTATATA
HSZFP36		X51760	55552	ZnF-C3H	Seed	ZFP-36 for a zinc finger protein	GAATTCCGAGAGAGAGACGCCCTGGAAGGTCTGTATCAGCGTCTGTCGCG
HTATIP		NM_006388	10524	Co-activator	Seed	HIV-1 Tat interactive protein, 60 kDa	ACATCCTCCAGGCAATGAGATTTACCGCAAGGGCACCATCTCCTTCTTTG
HTLF		NM_002158	3344	Forkhead	Seed	T-cell leukemia virus enhancer factor	TGGAATTCGTACATGTTTAGGTTCCCTAATAAGTACTGCAAAGACACAAA
HUMPPA	NT_010677:83	NM_014603	30850	ZnF-PHD	Found	paraneoplastic antigen	AGATGAAGCAGGCCAAGACCTACCTACTGGGTCCGGACGACCACCTGGCC
HYPH		AB023163	23390	ZnF-Other	Seed	Huntingtin interacting protein H	ATCCTTTTTCGATCATTCAATGCATAGTGCATTGCCCCTTGGGATATATT
HZF12	NT_011295:582	NM_033204	94039	ZnF-C2H2	Found	zinc finger protein 12	CCAGTAGTGGTGCACGGCGCACAGTAACACCAACTCGAAAGAGACCTTATGAA
ICSBP1		NM_002163	3394	Trp cluster-IRF	Seed	interferon consensus sequence binding protein 1	ACCAGGTCTTCCGGATGTTTCCAGATATTTGTGCCTCACACCAGAGATCA
ID1		NM_002165	3397	bHLH	Seed	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein	ATGAAAGTCGCCAGTGGCAGCACCGCCACCGCCGCCGCGGGCCCCAGCTG
ID2		NM_002166	3398	bHLH	Seed	inhibitor of DNA binding 2, dominant negative helix-loop-helix protein	TGTCCTTGCAGGCTTCTGAATTCCCTTCTGAGTTAATGTCAAATGACAGC
ID2B	NT_005999:169	M96843	84099	bHLH	Found	inhibitor of DNA binding 2B, dominant negative helix-loop-helix protei	AGCATCCTGTCCTTGCAGGCTTCTGAATTCCCTTCGGAGTTAATGTCAAATG
ID3		NM_002167	3399	bHLH	Seed	inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	ACTCAGCTTAGCCAGGTGGAAATCCTACAGCGCGTCATCGACTACATTCT
ID4		NM_001546	3400	bHLH	Seed	inhibitor of DNA binding 4, dominant negative helix-loop-helix protein	CCAACAAGAAAGTCAGCAAAGTGGAGATCCTGCAGCACGTTATCGACTAC
IGHMB