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COGENE: cDNA Libraries
Clones from 26 Day Gestation

4th Week, Known Genes

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Clone ID GenBank Acc/GI UniGene Description Significance
Level
4WE-C12-cDNA-std-01 292436HUMRPL30A Homo sapiens ribosomal protein L30 mRNA, complete cds7.3e-87
4WE-C12-cDNA-std-03 7706354NM_016081.1 Homo sapiens CGI-151 protein (LOC51653), mRNA 9.7e-08
4WE-C12-cDNA-std-06 4505362NM_002492.1 Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5 (16kD, SGDH) (NDUFB5) mRNA, and translated products 3.1e-94
4WE-C12-cDNA-std-09 339722HUMTLCAHuman ADP/ATP translocase mRNA, 3' end, clone pHAT83.7e-60
4WE-C12-cDNA-std-10 4501886NM_001614.1 Homo sapiens actin, gamma 1 (ACTG1) mRNA 3.4e-101
4WE-C12-cDNA-std-13 5729837NM_006530.1 Homo sapiens glioma-amplified sequence-41 (GAS41), mRNA 1.6e-126
4WE-C12-cDNA-std-14 4507750NM_001071.1 Homo sapiens thymidylate synthetase (TYMS) mRNA 3.1e-55
4WE-C12-cDNA-std-17 7706722NM_016271.1 Homo sapiens STRIN protein (STRIN), mRNA 3.8e-110
4WE-C12-cDNA-std-19 306556HUMCH13C6A Homo sapiens (clone 06) liver expressed high mobility group 1 protein mRNA, 3' end2.3e-26
4WE-C12-cDNA-std-20 4506644NM_000999.1 Homo sapiens ribosomal protein L38 (RPL38) mRNA 2.7e-69
4WE-C12-cDNA-std-23 4506648NM_000967.1 Homo sapiens ribosomal protein L3 (RPL3) mRNA 1.5e-26
4WE-C12-cDNA-std-24 4506648NM_000967.1 Homo sapiens ribosomal protein L3 (RPL3) mRNA 1.9e-79
4WE-C12-cDNA-std-26 7019408NM_013332.1 Homo sapiens hypoxia-inducible protein 2 (HIG2), mRNA 8.7e-111
4WE-C12-cDNA-std-52 5803226NM_006826.1 Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide (YWHAQ), mRNA 3.5e-77
4WE-C12-cDNA-std-54 6912633NM_012423.1 Homo sapiens ribosomal protein L13a (RPL13A), mRNA 1.0e-79
4WE-C12-cDNA-std-55 4506642NM_000998.1 Homo sapiens ribosomal protein L37a (RPL37A) mRNA 2.2e-38
4WE-C12-cDNA-std-57 4885438NM_005354.1 Homo sapiens jun D proto-oncogene (JUND) mRNA 3.7e-21
4WE-C12-cDNA-std-59 4506598NM_000977.1 Homo sapiens ribosomal protein L13 (RPL13) mRNA 4.5e-13
4WE-C12-cDNA-std-61 4758599NM_004514.1 Homo sapiens interleukin enhancer binding factor 1 (ILF1) mRNA 1.5e-81
4WE-C12-cDNA-std-63 4506700NM_001025.1 Homo sapiens ribosomal protein S23 (RPS23) mRNA 2.3e-78
4WE-C12-cDNA-std-65 4758081NM_004385.1 Homo sapiens chondroitin sulfate proteoglycan 2 (versican) (CSPG2) mRNA 4.2e-85
4WE-C12-cDNA-std-70 2583174AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds5.1e-68
4WE-C12-cDNA-std-71 2583174AF026844 Homo sapiens ribosomal protein L41 mRNA, complete cds 4.0e-80
4WE-C12-cDNA-std-72 4505398NM_003634.1 Homo sapiens 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like 1 (NIPSNAP1) mRNA 2.2e-116
4WE-C12-cDNA-std-73 4506688NM_001019.1 Homo sapiens ribosomal protein S15a (RPS15A) mRNA 6.0e-88
4WE-C12-cDNA-std-76 4505134NM_002391.1 Homo sapiens midkine (neurite growth-promoting factor 2) (MDK) mRNA 3.3e-35
4WE-C12-cDNA-std-77 6912633NM_012423.1 Homo sapiens ribosomal protein L13a (RPL13A), mRNA 3.2e-86
4WE-C12-cDNA-std-78 4758769NM_004541.1 Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 (7.5kD, MWFE) (NDUFA1) mRNA 1.3e-68
4WE-C12-cDNA-std-81 4505574NM_002568.1 Homo sapiens poly(A)-binding protein, cytoplasmic 1 (PABPC1), mRNA 8.3e-80
4WE-C12-cDNA-std-82 4506788NM_002970.1 Homo sapiens spermidine/spermine N1-acetyltransferase (SAT) mRNA 1.3e-63
4WE-C12-cDNA-std-88 4885402NM_005334.1 Homo sapiens host cell factor C1 (VP16-accessory protein) (HCFC1), mRNA 6.2e-42
4WE-C12-cDNA-std-93 6983841AB004064 Homo sapiens mRNA for tomoregulin, complete cds3.4e-23
4WE-C12-cDNA-std-94 4506740NM_001011.1 Homo sapiens ribosomal protein S7 (RPS7), mRNA 5.3e-80
4WE-C12-cDNA-std-96 4506696NM_001023.1 Homo sapiens ribosomal protein S20 (RPS20) mRNA 3.2e-09
4WE-C12-cDNA-std-E1 1486360HSCYCG1 H.sapiens mRNA for cyclin G1 1.2e-117
4WE-C12-cDNA-std-E14 4210495HSU61384 Homo sapiens GAS41 protein mRNA, complete cds 1.7e-122
4WE-C12-cDNA-std-E19 1486360HSCYCG1 H.sapiens mRNA for cyclin G1 4.8e-40
4WE-C12-cDNA-std-Y1 4506744NM_001013.1 Homo sapiens ribosomal protein S9 (RPS9) mRNA 1.4e-92
4WE-C12-cDNA-std-Y2 4506744NM_001013.1 Homo sapiens ribosomal protein S9 (RPS9) mRNA 6.3e-89
4WE-C12-cDNA-std-Y3 6912633NM_012423.1 Homo sapiens ribosomal protein L13a (RPL13A), mRNA 3.0e-68
4WE-C12-cDNA-std-Y11 4503794NM_002032.1 Homo sapiens ferritin, heavy polypeptide 1 (FTH1) mRNA 6.4e-89
4WE-C12-cDNA-std-Y15 6912633NM_012423.1 Homo sapiens ribosomal protein L13a (RPL13A), mRNA 3.9e-85
4WE-C12-cDNA-std-Y16 339696HUMTHYMB10 Homo sapiens thymosin beta-10 gene, 3'end 7.8e-82
4WE-C12-cDNA-std-Y18 4557796NM_000269.1 Homo sapiens non-metastatic cells 1, protein (NM23A) expressed in (NME1) mRNA 4.3e-84
4WE-C12-cDNA-std-Y19 4503794NM_002032.1 Homo sapiens ferritin, heavy polypeptide 1 (FTH1) mRNA 9.1e-113
4WE-C12-cDNA-std-Y27 7657243NM_014216.1 Homo sapiens inositol 1,3,4-triphosphate 5/6 kinase (ITPK1), mRNA 4.7e-25
4WE-C12-cDNA-std-126 BC000292.1 BC000292 Homo sapiens, actin, gamma 1, clone MGC:8332, mRNA, complete cds 0.0
4WE-C12-cDNA-std-130 NM_016592.1 NM_016592 Homo sapiens neuroendocrine secretory protein 55 (NESP55), mRNA 3e-57
4WE-C12-cDNA-std-133 XM_006796.1 XM_006796 Homo sapiens TAR (HIV) RNA-binding protein 2 (TARBP2), mRNA 5e-32
4WE-C12-cDNA-std-134 AF081484.1 AF081484 Homo sapiens alpha-tubulin isoform 1 mRNA, complete cds 0.0
4WE-C12-cDNA-std-135 XM_002864.1 XM_002864 Homo sapiens ribosomal protein L24 (RPL24), mRNA 0.0
4WE-C12-cDNA-std-136 AF081484.1 AF081484 Homo sapiens alpha-tubulin isoform 1 mRNA, complete cds 0.0
4WE-C12-cDNA-std-148 4505398 NM_003634.1 Homo sapiens NIPSNAP, C. elegans, homolog 1 (NIPSNAP1), mRNA 7.7e-72
4WE-C12-cDNA-std-152 4506670 NM_001004.1 Homo sapiens ribosomal protein, large P2 (RPLP2), mRNA 1.5e-73
4WE-C12-cDNA-std-225 887359 HUMORFB Homo sapiens (clone S164) mRNA, 3' end of cds 3.3e-68
4WE-C12-cDNA-std-227 4506678 NM_001014.1 Homo sapiens ribosomal protein S10 (RPS10), mRNA 2.6e-33
4WE-C12-cDNA-std-235 4826971 NM_005105.1 Homo sapiens RNA binding motif protein 8A (RBM8A), mRNA 4.5e-78
4WE-C12-cDNA-std-236 4406599 AF131775 Homo sapiens clone 25033 mRNA sequence, partial cds 7.9e-42
4WE-C12-cDNA-std-241 8923597 NM_017916.1 Homo sapiens hypothetical protein FLJ20643 (FLJ20643), mRNA 1.2e-38
4WE-C12-cDNA-std-242 8923597 NM_017916.1 Homo sapiens hypothetical protein FLJ20643 (FLJ20643), mRNA 1.1e-05
4WE-C12-cDNA-std-245 4507668 NM_003295.1 Homo sapiens tumor protein, translationally-controlled 1 (TPT1), mRNA 4.5e-52

4th Week, Homologs to Known Genes

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Clone ID GenBank Acc/GI UniGene Description Significance
Level
4WE-C12-cDNA-std-Y17 7110632NM_012261.1 Homo sapiens similar to S68401 (cattle) glucose induced gene (HS1119D91), mRNA 1.5e-34

4th Week, ESTs

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Clone ID GenBank Acc/GI UniGene Description Significance
Level
4WE-C12-cDNA-std-22 5407965AL038838DKFZp566P1146_s1 566 (synonym: hfkd2) Homo sapiens cDNA clone DKFZp566P1146 3' 4.7e-22
4WE-C12-cDNA-std-25 7311140HT0370RC1-HT0370-210100-013-d11 HT0370 Homo sapiens cDNA2.2e-97
4WE-C12-cDNA-std-Y14 3342731AC005330Homo sapiens chromosome 19, cosmid R34047, complete sequence1.9e-07
4WE-C12-cDNA-std-FS02 10438926 AK026164 Homo sapiens cDNA: FLJ22511 fis, clone HRC11837, highly similar to HUMMYLCB Human non-muscle myosin alkali light chain mRNA 8.3e-53
4WE-C12-cDNA-std-FS2 10281741 AF283772 Homo sapiens clone TCBAP0781 mRNA sequence 3.0e-50
4WE-C12-cDNA-std-127 AL049932.1 HSM800274 Homo sapiens mRNA; cDNA DKFZp564H2416 (from clone DKFZp564H2416) 8e-47
4WE-C12-cDNA-std-151 8439394 HSA119F19 Human DNA sequence from clone RP11-119F19 on chromosome 10 Contains a novel mRNA and part of a gene for a hypothetical 66.8 KD protein, ESTs, STSs and GSSs, complete sequence [Homo sapiens] 4.4e-86
4WE-C12-cDNA-std-147 10729218 AV710589 AV710589 Cu Homo sapiens cDNA clone CuAACD02 5' 7.6e-17
4WE-C12-cDNA-std-150 5406483 AL037016 DKFZp564H1064_r1 564 (synonym: hfbr2) Homo sapiens cDNA clone DKFZp564H1064 5' 0.0059
4WE-C12-cDNA-std-224 8158095 AW968150 EST380330 MAGE resequences, MAGJ Homo sapiens cDNA 2.4e-24
4WE-C12-cDNA-std-228 6602711 AL134524 DKFZp547O015_r1 547 (synonym: hfbr1) Homo sapiens cDNA clone DKFZp547O015 5' 5.3e-35
4WE-C12-cDNA-std-231 10730153 AV710847 AV710847 Cu Homo sapiens cDNA clone CuAANH10 5' 6.3e-17
4WE-C12-cDNA-std-232 8158150 AW968190 EST380385 MAGE resequences, MAGJ Homo sapiens cDNA 3.2e-29
4WE-C12-cDNA-std-233 8162993 AW973132 EST385245 MAGE resequences, MAGM Homo sapiens cDNA 7.9e-08

4th Week, Unknown Genes

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Clone ID Significance
Level
4WE-C12-cDNA-std-02 No significant hits
4WE-C12-cDNA-std-53 No significant hits
4WE-C12-cDNA-std-60 No significant hits
4WE-C12-cDNA-std-Y30 No significant hits

Last updated April 10, 2001