COGENE Home Table of Contents cDNA Libraries SAGE Data Lovett Lab Home Search

COGENE: cDNA Libraries
Clones from 4 Week Anterior Rhombomere

Genes in 4 Week Anterior Rhombomere

Note: Linking data appears in a new browser window.
Clone ID Acc/GI Gene ID Description Significance
Level
4AR-C12-cDNA-std-3A10 D31885 HUMORFKG1N Human mRNA for KIAA0069 gene, partial cds 5.4e-27
4AR-C12-cDNA-std-3A12 5454165 VTI2 Homo sapiens vesicle-associated soluble NSF attachment protein receptor (v-SNARE; homolog of S. cerevisiae VTI1) (VTI2) mRNA 1.3e-34
4AR-C12-cDNA-std-3A9 5031930 NACA Homo sapiens nascent-polypeptide-associated complex alpha polypeptide (NACA) mRNA 0.00053
4AR-C12-cDNA-std-3B11 4507750 TYMS Homo sapiens thymidylate synthetase (TYMS) mRNA 2.3e-49
4AR-C12-cDNA-std-3B4 4506694 RPS19 Homo sapiens ribosomal protein S19 (RPS19) mRNA 9.8e-15
4AR-C12-cDNA-std-3C1 V00710 MIT1HS Human mitochondrial genes for several tRNAs (Phe, Val, Leu) and 12S and 16S ribosomal RNAs 5.5e-89
4AR-C12-cDNA-std-3C3 4757855 BNIP2 Homo sapiens BCL2/adenovirus E1B 19kD-interacting protein 2 (BNIP2) mRNA 1.2e-29
4AR-C12-cDNA-std-3C4 4506706 RPS25 Homo sapiens ribosomal protein S25 (RPS25) mRNA 5.3e-85
4AR-C12-cDNA-std-3C5 4758187 DOC1 Homo sapiens Deleted in oral cancer-1 (DOC1) mRNA 1.7e-60
4AR-C12-cDNA-std-3C6 U14967 HSU14967 Human ribosomal protein L21 mRNA 5.5e-73
4AR-C12-cDNA-std-3C7 4506656 RPL6 Homo sapiens ribosomal protein L6 (RPL6) mRNA 6.5e-77
4AR-C12-cDNA-std-5A3 U49869 HSU49869 Human ubiquitin gene, complete cds 1.6e-47
4AR-C12-cDNA-std-5A6 4506678 RPS10 Homo sapiens ribosomal protein S10 (RPS10) mRNA2.1e-23
4AR-C12-cDNA-std-5B4 V00710 MIT1HS Human mitochondrial genes for several tRNAs (Phe, Val, Leu) and 12S and 16S ribosomal RNAs 1.3e-77
4AR-C12-cDNA-std-5C2 4506710 RPS27 Homo sapiens ribosomal protein S27 (RPS27) mRNA 3.4e-55
4AR-C12-cDNA-std-5C4 X94232 HSTCACT H.sapiens mRNA for novel T-cell activation protein 1.4e-73
4AR-C12-cDNA-std-5E4 4504196 GTF2F1 Homo sapiens general transcription factor IIF, polypeptide 1 (74kD subunit) (GTF2F1) mRNA 1.6e-16
4AR-C12-cDNA-std-5G3 M30938 HUMKUP Human Ku (p70/p80) subunit mRNA, complete cds 1.1e-94
4AR-C12-cDNA-std-5G4 D87666 D87666 Human heart mRNA for heat shock protein 90, partial cds 6.1e-44
4AR-C12-cDNA-std-5G5 4506694 RPS19 Homo sapiens ribosomal protein S19 (RPS19) mRNA 1.2e-12
4AR-C12-cDNA-std-021 4506600 RPL14 Homo sapiens ribosomal protein L14 (RPL14) mRNA 3.0e-79
4AR-C12-cDNA-std-023 5174752 ZNF145 Homo sapiens zinc finger protein 145 (Kruppel-like, expressed in promyelocytic leukemia) (ZNF145) mRNA 3.5e-59
4AR-C12-cDNA-std-3A5 L05093 HUMRIBPROD Homo sapiens ribosomal protein L18a mRNA, complete cds 3.2e-50
4AR-C12-cDNA-std-3A7 L05093 HUMRIBPROD Homo sapiens ribosomal protein L18a mRNA, complete cds 7.0e-103
4AR-C12-cDNA-std-3B1 4507750 TYMS Homo sapiens thymidylate synthetase (TYMS) mRNA 4.1e-52
4AR-C12-cDNA-std-3B7 4506694 RPS19 Homo sapiens ribosomal protein S19 (RPS19) mRNA 2.8e-14
4AR-C12-cDNA-std-01-Rev 4757773 NM_004311.1 Homo sapiens ADP-ribosylation factor-like 3 (ARL3), mRNA 2.1e-64
4AR-C12-cDNA-std-06-Rev 38422 HSRPS18 Homo sapiens mRNA for ribosomal protein S18 7.4e-23
4AR-C12-cDNA-std-07-Rev 2343110 AF004231 Homo sapiens monocyte/macrophage Ig-related receptor MIR-10 (MIR cl-10) mRNA, complete cds 0.065
4AR-C12-cDNA-std-09-Rev 5138994 AB026436 Homo sapiens mRNA for dual specificity phosphatase MKP-5, complete cds 0.076
4AR-C12-cDNA-std-12 2738496 AF006484 Homo sapiens putative oral tumor suppressor protein (doc-1) mRNA, complete cds 4.7e-59
4AR-C12-cDNA-std-18 11422423 XM_005020.1 Homo sapiens Putative prostate cancer tumor suppressor (N33), mRNA 3.9e-81
4AR-C12-cDNA-std-19-Rev 11422423 XM_005020.1 Homo sapiens Putative prostate cancer tumor suppressor (N33), mRNA 4.3e-89
4AR-C12-cDNA-std-20-Rev 1799559 D78345 Human DNA for Ig gamma heavy-chain, membrane-bound-type and secrete-type, partial cds 3.2e-66
4AR-C12-cDNA-std-303 12742147 XM_012914.1 Homo sapiens similar to calponin 2 (H. sapiens) (LOC65861), mRNA 5.9e-39
4AR-C12-cDNA-std-306 12653180 BC000358 Homo sapiens, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, clone MGC:8666, mRNA, complete cds 1.5e-53
4AR-C12-cDNA-std-307 1799559 D78345 Human DNA for Ig gamma heavy-chain, membrane-bound-type and secrete-type, partial cds 9.7e-38
4AR-C12-cDNA-std-310 12736727 XM_006387.2 Homo sapiens small acidic protein (IMAGE145052), mRNA 0.027
4AR-C12-cDNA-std-312 6647297 HSYUBG1 Homo sapiens ubiquitin gene 1.8e-71
4AR-C12-cDNA-std-313 12737386 XM_006740.2 Homo sapiens deleted in oral cancer (mouse, homolog) 1 (DOC1), mRNA 1.6e-64
4AR-C12-cDNA-std-316 7706588 NM_016592.1 Homo sapiens neuroendocrine secretory protein 55 (NESP55), mRNA 3.3e-74
4AR-C12-cDNA-std-318 8117711 AF052955 Homo sapiens F1-ATPase epsilon-subunit (ATP5E) mRNA, complete cds; nuclear gene for mitochondrial product 2.0e-74
4AR-C12-cDNA-std-320 11968181 NM_022551.1 Homo sapiens ribosomal protein S18 (RPS18), mRNA 4.6e-26
4AR-C12-cDNA-std-322 11417362 XM_004050.1 Homo sapiens low molecular mass ubiquinone-binding protein (9.5kD) (QP-C), mRNA 8.5e-38
4AR-C12-cDNA-std-330 4503248 NM_003472.1 Homo sapiens DEK oncogene (DNA binding) (DEK), mRNA 2.9e-21
4AR-C12-cDNA-std-331 13097713 BC003562 Homo sapiens, dual specificity phosphatase 6, clone MGC:1954, mRNA, complete cds 8.6e-62
4AR-C12-cDNA-std-332 3287488 AF028832 Homo sapiens Hsp89-alpha-delta-N mRNA, complete cds 3.5e-95
4AR-C12-cDNA-std-333 7959180 AB040893 Homo sapiens mRNA for KIAA1460 protein, partial cds 4.2e-84
4AR-C12-cDNA-std-335 4506696 NM_001023.1 Homo sapiens ribosomal protein S20 (RPS20), mRNA 2.7e-69
4AR-C12-cDNA-std-336 11440336 XM_006460.1 Homo sapiens ribosomal protein S25 (RPS25), mRNA 8.5e-96
4AR-C12-cDNA-std-338 4506668 NM_001003.1 Homo sapiens ribosomal protein, large, P1 (RPLP1), mRNA 2.4e-42
4AR-C12-cDNA-std-339 1799559 D78345 Human DNA for Ig gamma heavy-chain, membrane-bound-type and secrete-type, partial cds 2.6e-100
4AR-C12-cDNA-std-346 4885080 NM_005175.1 Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 1 (ATP5G1), mRNA 8.9e-67
4AR-C12-cDNA-std-348 4506644 NM_000999.1 Homo sapiens ribosomal protein L38 (RPL38), mRNA 2.2e-55
4AR-C12-cDNA-std-308 1799559 D78345 Human DNA for Ig gamma heavy-chain, membrane-bound-type and secrete-type, partial cds 5.9e-56
4AR-C12-cDNA-std-327 6496932 AI906545 CM-BT115-080499-006 BT115 Homo sapiens cDNA 2.1e-17
4AR-C12-cDNA-std-341 3483693 HUMZD62D10 Homo sapiens full length insert cDNA clone ZD62D10 8.6e-22

ESTs in 4 Week Anterior Rhombomere

Note: Linking data appears in a new browser window.

Clone ID GenBank Acc/GI UniGene Description Significance
Level
4AR-C12-cDNA-std-22-1 5174430 DXS648E Homo sapiens DNA segment on chromosome X (unique) 648 expressed sequence (DXS648E) mRNA 7.1e-84
4AR-C12-cDNA-std-3A2 AF071077.1 AF071077 Homo sapiens cell-line HeLa Nup98-Nup96 precursor splice variant 1 mRNA, complete cds 1.5e-36
4AR-C12-cDNA-std-3A3N32709 N32709 Homo sapiens cDNA clone 267520 5' 4.5e-29
4AR-C12-cDNA-std-5A2 AA449693 AA449693 Soares total fetus Nb2HF8 9w Homo sapiens cDNA clone 785778 3' 1.0e-15
4AR-C12-cDNA-std-5E3 AA029071 AA029071 Soares pregnant uterus NbHPU Homo sapiens cDNA clone 470200 3' 1.6e-63
4AR-C12-cDNA-std-02-Rev 7362991 HSA276256 Homo sapiens partial mRNA, clone c4-1d6 2.7e-30
4AR-C12-cDNA-std-05 10437118 AK024752 Homo sapiens cDNA: FLJ21099 fis, clone CAS04610 1.1e-74
4AR-C12-cDNA-std-13-Rev 10439530 AK026634 Homo sapiens cDNA: FLJ22981 fis, clone KAT11391, highly similar to HUMTI227HC Human mRNA for TI-227H 7.8e-56
4AR-C12-cDNA-std-14 7020806 AK000601 Homo sapiens cDNA FLJ20594 fis, clone KAT08731 2.8e-98
4AR-C12-cDNA-std-15-Rev 7020806 AK000601 Homo sapiens cDNA FLJ20594 fis, clone KAT08731 7.5e-87
4AR-C12-cDNA-std-17 4156153 AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence 1.9e-95
4AR-C12-cDNA-std-304 2339843 HSU95742 Human chromosome 16p13.1 BAC clone CIT987SK-551G9 complete sequence [Homo sapiens] 1.5e-78
4AR-C12-cDNA-std-305 2339843 HSU95742 Human chromosome 16p13.1 BAC clone CIT987SK-551G9 complete sequence [Homo sapiens] 1.3e-119
4AR-C12-cDNA-std-309 10437901 AK025395 Homo sapiens cDNA: FLJ21742 fis, clone COLF4912 2.9e-69
4AR-C12-cDNA-std-314 3341707 AC004757 Homo sapiens chromosome 17, clone hCIT.117_K_16, complete sequence 1.6e-111
4AR-C12-cDNA-std-321 7658298 AC007782 Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence 4.2e-40
4AR-C12-cDNA-std-328 10434003 AK022550 Homo sapiens cDNA FLJ12488 fis, clone NT2RM2000735, moderately similar to ZINC FINGER PROTEIN 43 6.3e-36
4AR-C12-cDNA-std-329 4914513 HS199H16 Human DNA sequence from clone RP1-199H16 on chromosome 22q12-13 Contains the DMC1 ((dosage suppressor of mck1, yeast homolog) meiosis-specific homologous recombination protein (LIM15)) gene, ESTs, GSSs and a putative CpG island, complete sequence [Homo> 1.6e-39
4AR-C12-cDNA-std-334 10437436 AK025003 Homo sapiens cDNA: FLJ21350 fis, clone COL02751 6.4e-86
4AR-C12-cDNA-std-301 8170538 AW979250 EST391360 MAGE resequences, MAGP Homo sapiens cDNA 7.2e-12
4AR-C12-cDNA-std-302 10283664 AV681801 AV681801 GKB Homo sapiens cDNA clone GKBACD07 5' 1.1e-15
4AR-C12-cDNA-std-317 5405974 AL036418 DKFZp564A1462_r1 564 (synonym: hfbr2) Homo sapiens cDNA clone DKFZp564A1462 5' 1.6e-08
4AR-C12-cDNA-std-319 8158095 AW968150 EST380330 MAGE resequences, MAGJ Homo sapiens cDNA 1.3e-17
4AR-C12-cDNA-std-323 10744155 BF038373 601459365F1 NIH_MGC_66 Homo sapiens cDNA clone IMAGE:3862576 5' 4.7e-17
4AR-C12-cDNA-std-324 12665780 BG153750 nag59d02.x1 NCI_CGAP_Co26 Homo sapiens cDNA clone IMAGE:4225946 3' similar to contains Alu repetitive element; 3.5e-06
4AR-C12-cDNA-std-325 7632536 AW732209 ba08b02.x1 NIH_MGC_7 Homo sapiens cDNA clone IMAGE:2823723 3' 4.4e-25
4AR-C12-cDNA-std-326 12663610 BG151580 nag61g02.x1 NCI_CGAP_Co26 Homo sapiens cDNA clone IMAGE:4226114 3' similar to contains Alu repetitive element; 0.044
4AR-C12-cDNA-std-337 5408099 AL038983 DKFZp566B104_s1 566 (synonym: hfkd2) Homo sapiens cDNA clone DKFZp566B104 3' 5.6e-45
4AR-C12-cDNA-std-340 3649591 AI142134 GDM00L05 human embryo cDNA library Homo sapiens cDNA 5' 2.4e-57
4AR-C12-cDNA-std-342 8163141 AW973275 EST385373 MAGE resequences, MAGM Homo sapiens cDNA 0.022
4AR-C12-cDNA-std-343 12663775 BG151745 nag63h07.x1 NCI_CGAP_Co26 Homo sapiens cDNA clone IMAGE:4226532 3' similar to contains Alu repetitive element;contains element HGR HGR repetitive element ; 2.7e-05
4AR-C12-cDNA-std-344 5432169 AL043941 DKFZp434F0528_r1 434 (synonym: htes3) Homo sapiens cDNA clone DKFZp434F0528 5' 2.1e-77
4AR-C12-cDNA-std-347 5405974 AL036418 DKFZp564A1462_r1 564 (synonym: hfbr2) Homo sapiens cDNA clone DKFZp564A1462 5' 5.4e-07
Last updated April 10, 2001