COGENE, the Craniofacial and Oral Gene Expression Network
Serial Analysis of Gene Expression (SAGE)

Table of Contents COGENE Home cDNA Libraries SAGE Data Next set of SAGE tags Previous set of SAGE tags Beginning SAGE tag list End SAGE tag list Bottom of page

SAGE Library Tags: 4 Week Anterior Rhombomere

Count Tag_SequenceUniGene_Hs.GeneDescription
8 CGGCTGGTGA 407981 PSMB1 proteasome (prosome, macropain) subunit, beta type, 1
8 CGGCTGGTGA 437497 - ESTs, Highly similar to hypothetical protein MGC20255 [Homo sapiens] [H.sapiens]
8 GACATATGTA 432170 COX7B cytochrome c oxidase subunit VIIb
8 GCTGCCCTTG 406578 TUBA6 tubulin alpha 6
8 GCTGCCCTTG 433394 TUBA3 tubulin, alpha 3
8 GCTGTTGCGC 8102 RPS20 ribosomal protein S20
8 GGAACAAACA 375108 CD24 CD24 antigen (small cell lung carcinoma cluster 4 antigen)
8 GGCTGGGGGC 265848 PDE4DIP phosphodiesterase 4D interacting protein (myomegalin)
8 GGCTGGGGGC 352407 COAS3 chromosome 1 amplified sequence 3
8 GGCTGGGGGC 408943 PFN1 profilin 1
8 GGTGAAGACA 26951 KIAA0375 KIAA0375 gene product
8 GGTGAAGACA 288181 CTSH cathepsin H
8 TAGTTGAAGT 131255 UQCRB ubiquinol-cytochrome c reductase binding protein
8 TCCTCAAGAT 433413 ERH enhancer of rudimentary homolog (Drosophila)
8 TCTGCTTACA 74267 RPL15 ribosomal protein L15
8 TGGCTAGTGT 433434 PSMB7 proteasome (prosome, macropain) subunit, beta type, 7
8 TGGGCCAAGA 272003 HBZ hemoglobin, zeta
8 TGGGCCAAGA 278056 FLJ40342 hypothetical protein FLJ40342
8 TTACTTATAC 65406 MGC26706 hypothetical protein MGC26706
8 TTACTTATAC 130730 AQP2 aquaporin 2 (collecting duct)
8 TTCATTATAA 250655 PTMA prothymosin, alpha (gene sequence 28)
8 TTCATTATAA 264317 - ESTs, Highly similar to THYA_HUMAN Prothymosin alpha [H.sapiens]
8 TTGGTCAGGC 54627 MtFMT methionyl-tRNA formyltransferase, mitochondrial
8 TTGGTCAGGC 172012 SNARK likely ortholog of rat SNF1/AMP-activated protein kinase
8 TTGTAATCGT 281960 OAZ1 ornithine decarboxylase antizyme 1
8 TTTCTAGTTT 111894 LAPTM4A lysosomal-associated protein transmembrane 4 alpha
8 TTTGTTAAAA 111244 RTP801 HIF-1 responsive RTP801
8 TTTGTTAAAA 207118 - EST
8 TTTTTGATCA 171271 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
8 TTTTTGATCA 422118 EEF1A1 eukaryotic translation elongation factor 1 alpha 1
7 AACGACCTCG 179661 OK/SW-cl.56 beta 5-tubulin
7 AACGACCTCG 356729 - ESTs, Highly similar to TBB2_HUMAN Tubulin beta-2 chain [H.sapiens]
7 AACGCGGCCA 60300 ZPR9 zinc finger-like protein 9
7 AACGCGGCCA 407995 MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
7 AAGTTGCTAT 406455 PSAP prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy)
7 AGTGTCTGTG 8867 CYR61 cysteine-rich, angiogenic inducer, 61
7 ATGCAGCCAT 75212 ODC1 ornithine decarboxylase 1
7 ATTAACAAAG 1708 CCT3 chaperonin containing TCP1, subunit 3 (gamma)
7 ATTAACAAAG 374523 GNAS GNAS complex locus
7 CAATGTGAGC 356428 - Homo sapiens mRNA expressed only in placental villi, clone SMAP83.
7 CAATGTGAGC 422118 EEF1A1 eukaryotic translation elongation factor 1 alpha 1
7 CCGTGGTCGT 99853 FBL fibrillarin
7 CCTCGGAAAA 343481 - ESTs, Moderately similar to RL38_HUMAN 60S ribosomal protein L38 [H.sapiens]
7 CCTCGGAAAA 425668 RPL38 ribosomal protein L38
7 CGGATCTGCT - - --
7 CTGCTGAGTG 79259 HSPC152 hypothetical protein HSPC152
7 CTGTGCATTT 172207 NONO non-POU domain containing, octamer-binding
7 CTGTGCATTT 355861 NONO non-POU domain containing, octamer-binding
7 GACTCTGGTG 433406 RPS15A ribosomal protein S15a
7 GACTTCACTT 356605 AK000009 Acrg embryonic lethality (mouse) minimal region ortholog
7 GACTTCACTT 394389 PPIB peptidylprolyl isomerase B (cyclophilin B)
7 GCATTTAAAT 356184 - ESTs, Highly similar to eukaryotic translation elongation factor 1 beta 2; eukaryotic translation elongation factor 1 beta 1 [Homo sapiens] [H.sapiens]
7 GCATTTAAAT 421608 EEF1B2 eukaryotic translation elongation factor 1 beta 2
7 GGCTTTGGAG 90918 C11orf10 chromosome 11 open reading frame 10
7 GGCTTTGGAG 156895 - ESTs
7 GGGTTTTTAT 74497 NSEP1 nuclease sensitive element binding protein 1
7 GTAAGTGTAC - - --
7 GTGAAACCCT 182476 WBSCR21 Williams Beuren syndrome chromosome region 21
7 GTGAAACCCT 289053 CBCIP2 CAP-binding protein complex interacting protein 2
7 GTGACAGAAG 77837 UGP2 UDP-glucose pyrophosphorylase 2
7 GTGACAGAAG 129673 EIF4A1 eukaryotic translation initiation factor 4A, isoform 1
7 TAAAAAAAAA 379466 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog)
7 TAAAAAAAAA 431584 RPS14 ribosomal protein S14
7 TACCAGTGTA 79037 HSPD1 heat shock 60kDa protein 1 (chaperonin)
7 TCATCATCAG 326525 ARSD arylsulfatase D
7 TCATCATCAG 424299 RPLP1 ribosomal protein, large, P1
7 TCCCGTACAC - - --
7 TCTCTTCACC - - --
7 TGACACCAGG 82045 MDK midkine (neurite growth-promoting factor 2)
7 TGCATCTGGT 75410 HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
7 TGTGTGTTTG 175622 FLJ32827 hypothetical protein FLJ32827
7 TGTGTGTTTG 226117 H1F0 H1 histone family, member 0
7 TTCCTGGTAG 246112 U5-200KD U5 snRNP-specific protein, 200-KD
7 TTTGGAATGT 78825 MATR3 matrin 3
7 TTTGTTAATT 245710 HNRPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
7 TTTGTTAATT 278857 HNRPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
7 TTTTCTAACG 330716 - Homo sapiens mRNA, 3'UTR, up-regulated by BCG-CWS.
6 AAGGTCGAGC 184582 DPP7 dipeptidylpeptidase 7
6 AAGGTCGAGC 356004 - ESTs, Highly similar to RL24_HUMAN 60S ribosomal protein L24 (L30) [H.sapiens]
6 AAGGTCTGAG 256184 EEF1G eukaryotic translation elongation factor 1 gamma
6 AATATGTGGG 98664 - Homo sapiens BPA-1 mRNA for brain peptide A1, complete cds.
6 AATATGTGGG 351875 COX6C cytochrome c oxidase subunit VIc
6 ACTAACACCC - - --
6 ACTTACCTGC 12504 ARK Arkadia
6 ACTTACCTGC 431668 COX6B cytochrome c oxidase subunit VIb
6 ACTTGGAACT 189847 PUNC putative neuronal cell adhesion molecule
6 AGCACATTTG 73875 FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
6 AGCACATTTG 289092 COTL1 coactosin-like 1 (Dictyostelium)
6 AGGATGGCGG 405042 RPL12 ribosomal protein L12
6 AGGGCTTCCA 356769 - ESTs, Moderately similar to RL10_HUMAN 60S ribosomal protein L10 (QM protein) (Tumor suppressor QM) (Laminin receptor homolog) [H.sapiens]
6 AGGGCTTCCA 412900 RPL10 ribosomal protein L10
6 ATAGACGCAA 6353 MORF4L1 mortality factor 4 like 1
6 ATCGCTTTCT 177486 APP amyloid beta (A4) precursor protein (protease nexin-II, Alzheimer disease)
6 ATGACTCAAG 211595 PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
6 ATGACTCAAG 239752 NR2F6 nuclear receptor subfamily 2, group F, member 6
6 CAGCAGAAGC 44499 PNN pinin, desmosome associated protein
6 CAGCAGAAGC 380718 SERF2 small EDRK-rich factor 2
6 CATCTAAACT 180900 WBSCR1 Williams-Beuren syndrome chromosome region 1
6 CATCTTCACC 409158 RPS25 ribosomal protein S25
6 CCAACCGTGC 75207 GLO1 glyoxalase I
6 CCAACCGTGC 303125 PIGPC1 p53-induced protein PIGPC1
6 CCACTAATGG 180139 SMT3H2 SMT3 suppressor of mif two 3 homolog 2 (yeast)
6 CCAGTGGCCC 180920 RPS9 ribosomal protein S9
6 CCCATCCGGA 406682 RPL26 ribosomal protein L26
6 CCCTGGGTTC 422118 EEF1A1 eukaryotic translation elongation factor 1 alpha 1
6 CCCTGGGTTC 430150 FTL ferritin, light polypeptide
6 CCTATTTACT 433419 COX4I1 cytochrome c oxidase subunit IV isoform 1
6 CCTTGGTTCA 422118 EEF1A1 eukaryotic translation elongation factor 1 alpha 1
6 CGGCTGAATT 392837 PGD phosphogluconate dehydrogenase
6 CGTGTTAATG 2110 ZNF9 zinc finger protein 9 (a cellular retroviral nucleic acid binding protein)
6 CTACTGTCTA - - --
6 GAAACAAGAT 59475 DKFZP586M0122 likely ortholog of mouse RNA polymerase 1-4 (194 kDa subunit)
6 GAAACAAGAT 78771 PGK1 phosphoglycerate kinase 1
6 GAAATGATGA 149158 - ESTs
6 GAAATGATGA 288856 PFDN5 prefoldin 5
6 GCGAAACCCC 30211 FLJ22313 hypothetical protein FLJ22313
6 GCGAAACCCC 334437 MGC4248 hypothetical protein MGC4248
6 GCGCTGGAGT 110695 SF3b10 SF3b10
6 GCGCTGGAGT 290943 MGC33974 hypothetical protein MGC33974
6 GCTTCCATCT 55296 BAT1 HLA-B associated transcript 1
6 GCTTCCATCT 78768 LENG4 leukocyte receptor cluster (LRC) member 4
6 GGGAAAACGG 346950 CRABP1 cellular retinoic acid binding protein 1
6 GGGGAAATCG 76293 TMSB10 thymosin, beta 10
6 GGGGTAAGAA 80423 PBP prostatic binding protein
6 GGGTCAAAAG 181307 H3F3A H3 histone, family 3A
6 GGGTCAAAAG 278538 - Homo sapiens, clone IMAGE:5269640, mRNA
6 GTGCCCTGTT 278411 NCKAP1 NCK-associated protein 1
6 GTGCCCTGTT 337629 - Homo sapiens mRNA; cDNA DKFZp434D115 (from clone DKFZp434D115)
6 GTGTATCTTT 73965 SFRS2 splicing factor, arginine/serine-rich 2
6 GTTTTTCATT 539 RPS29 ribosomal protein S29
6 GTTTTTCATT 26663 CEB1 cyclin-E binding protein 1
6 TAGCTGAGAC 159557 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
6 TGATTTCACT - - --
6 TGCAATTCCT 300141 RPL39 ribosomal protein L39
6 TGCAGCAAAA 82202 RPL17 ribosomal protein L17
6 TGCAGCAAAA 125031 - Homo sapiens mRNA; cDNA DKFZp313E1815 (from clone DKFZp313E1815)
6 TGGAAAGTGA 25647 FOS v-fos FBJ murine osteosarcoma viral oncogene homolog
6 TGGAAAGTGA 276760 - Homo sapiens cDNA FLJ40222 fis, clone TESTI2021785.
6 TGTAATCAAT 376844 HNRPA1 heterogeneous nuclear ribonucleoprotein A1
6 TTAACCCTCT 180877 H3F3B H3 histone, family 3B (H3.3B)
6 TTTGTGACTG 343926 CTBP1 C-terminal binding protein 1
6 TTTTGTAAAT 7045 GL004 GL004 protein
6 TTTTGTAAAT 75607 MARCKS myristoylated alanine-rich protein kinase C substrate
5 AAAACATTCT 323562 DKFZp564K142 hypothetical protein DKFZp564K142 similar to implantation-associated protein
5 AAAGTGAAGA 334477 FLJ23277 FLJ23277 protein
5 AAAGTGAAGA 356766 - Homo sapiens, clone IMAGE:5285034, mRNA
5 AACTCTTGAA 58189 EIF3S3 eukaryotic translation initiation factor 3, subunit 3 gamma, 40kDa
5 AAGATCCCCG 107187 LOC51596 divalent cation tolerant protein CUTA
5 AAGGAGTTTG 301 TYRO3 TYRO3 protein tyrosine kinase
5 AAGGAGTTTG 433482 NDUFB7 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa
5 AAGTTTGTGG 128866 HSA9947 putative ATPase
5 AAGTTTGTGG 414990 RPS3 ribosomal protein S3
5 ACAGTGCTTG 80350 PPP2CB protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform
5 ACAGTGGGGA 16426 PODXL podocalyxin-like
5 ACAGTGGGGA 278270 TEBP unactive progesterone receptor, 23 kD
5 ACAGTGGGGA 288443 - ESTs
5 ACCGGTCCGG 431392 RPL13 ribosomal protein L13
5 ACGCAGGGAG 356531 HSPCA heat shock 90kDa protein 1, alpha
5 ACTGGTACGT 235557 ATP5J2 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit f, isoform 2
5 AGCAGCTTCT 356360 RPS2 ribosomal protein S2
5 AGCCTTTGTT 9930 SERPINH2 serine (or cysteine) proteinase inhibitor, clade H (heat shock protein 47), member 2
5 AGCCTTTGTT 83848 TPI1 triosephosphate isomerase 1
5 AGGTCAGGAG 192853 UBE2G2 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast)
5 AGGTCAGGAG 209065 PKD1-like polycystic kidney disease 1-related
5 AGGTGGCAAG - - --
5 AGTGTAATGG 64595 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
5 ATGCTAGATT 129548 HNRPK heterogeneous nuclear ribonucleoprotein K
5 ATGCTAGATT 199160 MLL myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)
5 CAACATTCCT 180015 DDT D-dopachrome tautomerase
5 CACCCCTGAT 173724 CKB creatine kinase, brain
5 CAGTTGTGGT 90744 PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
5 CAGTTGTGGT 117546 NNAT neuronatin
5 CCCAGCCACT 298262 RPS19 ribosomal protein S19
5 CCCAGCCACT 302749 FKBP9 FK506 binding protein 9, 63 kDa
5 CCTCCAGCTA 242463 KRT8 keratin 8
5 CCTCCAGCTA 356123 - ESTs, Highly similar to I37982 Keratin 8 - human [H.sapiens]
5 CCTTTGTAAG 13999 SIN3B SIN3 homolog B, transcriptional regulator (yeast)
5 CCTTTGTAAG 78465 JUN v-jun sarcoma virus 17 oncogene homolog (avian)
5 CTAAACTTTT 34497 SMC6L1 SMC6 structural maintenance of chromosomes 6-like 1 (yeast)
5 CTAAACTTTT 180919 ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
5 CTCAACAGCA 7811 EIF3S5 eukaryotic translation initiation factor 3, subunit 5 epsilon, 47kDa
5 CTCAACAGCA 256972 - ESTs, Weakly similar to putative ATPase [Homo sapiens] [H.sapiens]
5 CTCGGTGATG 279903 RHEB2 Ras homolog enriched in brain 2
5 CTCGGTGATG 355976 RHEB2 Ras homolog enriched in brain 2
5 CTGAGACAAA 101025 BTF3 basic transcription factor 3
5 CTGAGACAAA 181965 BTF3L1 basic transcription factor 3, like 1
5 CTGAGACGAA 101025 BTF3 basic transcription factor 3
5 CTGCTGTGAT 1063 SNRPC small nuclear ribonucleoprotein polypeptide C
5 CTGCTGTGAT 169160 - Homo sapiens, clone IMAGE:5275587, mRNA
5 CTGCTTAAGA 181357 LAMR1 laminin receptor 1 (ribosomal protein SA, 67kDa)
5 CTTAAGATTC 119908 NOP5/NOP58 nucleolar protein NOP5/NOP58
5 CTTCATCATC 75249 ARL6IP ADP-ribosylation factor-like 6 interacting protein
5 GAAGATGTGT 112318 TOM7 homolog of Tom7 (S. cerevisiae)
5 GAATCGGTTA 409829 NDUFS5 NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)
5 GAATTAACAT 79474 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide
5 GAATTAACAT 90073 CSE1L CSE1 chromosome segregation 1-like (yeast)
5 GACCCAGAGG 283108 HBG1 hemoglobin, gamma A
5 GACCCAGAGG 386655 HBG2 hemoglobin, gamma G
5 GAGGCCATCC 70830 LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
5 GATAGTTGTG 77558 HMGN3 high mobility group nucleosomal binding domain 3
5 GATGCGCTTG 184014 RPL31 ribosomal protein L31
5 GCCCAGCTGG 12479 AMSH associated molecule with the SH3 domain of STAM
5 GCCCAGCTGG 334798 EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
5 GCCTCCTCCC 283781 M9 muscle specific gene
5 GCCTCCTCCC 305882 OPLAH 5-oxoprolinase (ATP-hydrolysing)
5 GCCTCCTCCC 420623 - ESTs
5 GCTCAGCTGG 334798 EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
5 GCTTTATTTG 426930 ACTB actin, beta
5 GGAAGTTTCG 55847 MRPL51 mitochondrial ribosomal protein L51
5 GGAGCTCTGT 227750 NDUFB4 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa
5 GGCAGAGGAC 118638 NME1 non-metastatic cells 1, protein (NM23A) expressed in
5 GGCAGAGGAC 224137 HSPC109 hypothetical protein HSPC109
5 GGCCCTCTGA 161362 PIN1 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1
5 GGCCTTGACC 109697 - Homo sapiens cDNA FLJ90096 fis, clone HEMBA1005913.
5 GGCTGGAGCC 124915 MGC2601 hypothetical protein MGC2601
5 GGCTGGAGCC 356529 - ESTs, Weakly similar to TONDU [Homo sapiens] [H.sapiens]
5 GTGACAACAC 149155 VDAC1 voltage-dependent anion channel 1
5 GTGATGGTGT 3352 HDAC2 histone deacetylase 2
5 GTGATGGTGT 197345 G22P1 thyroid autoantigen 70kDa (Ku antigen)
5 GTGGTGGACA 85963 DKFZP564M182 DKFZP564M182 protein
5 GTGGTGGACA 194143 BRCA1 breast cancer 1, early onset
5 GTTAACGTCC 178391 RPL36A ribosomal protein L36A
5 GTTAACGTCC 355599 - ESTs, Highly similar to ribosomal protein L36a; 60S ribosomal protein L44; L44-like ribosomal protein; ribosomal protein L44; ribosomal protein L36a homologue; 60S ribosomal protein L36a [Homo sapiens] [H.sapiens]
5 GTTCCCTGGC 12701 TM4SF11 transmembrane 4 superfamily member 11 (plasmolipin)
5 GTTCCCTGGC 177415 FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived); ribosomal protein S30
5 TAAATAATTT 1197 HSPE1 heat shock 10kDa protein 1 (chaperonin 10)
5 TACCAAGACC 3059 COPB coatomer protein complex, subunit beta
5 TACCCCACCC 7647 MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
5 TACCCCACCC 97784 - Homo sapiens, similar to hypothetical protein, clone MGC:33651 IMAGE:4827863, mRNA, complete cds
5 TACTAGTCCT 356531 HSPCA heat shock 90kDa protein 1, alpha
5 TACTTGGTCT 11355 - Homo sapiens mRNA differentially expressed in malignant melanoma, clone MM D3
5 TATCACTCTG 278362 MEA male-enhanced antigen
5 TATTAGCTCT - - --
5 TCTAAGTACG - - --
5 TCTGAAGTCA 170290 DLG5 discs, large (Drosophila) homolog 5
5 TCTGAAGTCA 180919 ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
5 TCTGCAATGA 8170 YR-29 hypothetical protein YR-29
5 TCTGTCAAGA 433960 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (oligomycin sensitivity conferring protein)
5 TCTTGTGCAT 2795 LDHA lactate dehydrogenase A
5 TGAAGGAGCC 89399 ATP5G2 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 2
5 TGAAGGAGCC 200317 KIAA1404 KIAA1404 protein
5 TGAGAGGGTG 74405 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
5 TGAGAGGGTG 356210 - ESTs
5 TGAGGCCAGG 79162 SSRP1 structure specific recognition protein 1
5 TGAGGCCAGG 110128 FLJ10060 putative G-protein coupled receptor GPCR42
5 TGCTCTGAAT 288390 FLJ22795 hypothetical protein FLJ22795
5 TGCTCTGAAT 405809 - Homo sapiens cDNA FLJ90297 fis, clone NT2RP2000447, moderately similar to GOLGIN-95.
5 TGGAGCGTCC - - --
5 TGGCAAGATG 91728 PMSCL1 polymyositis/scleroderma autoantigen 1, 75kDa
5 TGTAGTTTGA 171626 SKP1A S-phase kinase-associated protein 1A (p19A)

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Last updated Mon May 19 12:12:06 CDT 2003 ;